FFCP PHASE1:Hg19::chr15:49715449..49715464,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2252 | |EntrezGene=2252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3685 | |HGNC=3685 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000560765,ENST00000560979_5end | |association_with_transcript=0bp_to_ENST00000560765,ENST00000560979_5end | ||
|cluster_id=chr15:49715449..49715464,+ | |||
|coexpression_cluster_id=C1741 | |||
|description=CAGE_peak_1_at_FGF7_5end | |description=CAGE_peak_1_at_FGF7_5end | ||
|id=chr15:49715449..49715464,+ | |id=chr15:49715449..49715464,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.02e-24!180;CL:0000057!6.79e-18!75;CL:0000680!3.29e-17!57;CL:0000056!3.29e-17!57;CL:0000355!3.29e-17!57;CL:0000187!3.38e-16!54;CL:0000183!3.10e-13!59;CL:0000393!1.03e-12!60;CL:0000211!1.03e-12!60;CL:0000192!3.03e-12!42;CL:0000514!3.03e-12!42;CL:0002620!3.61e-11!23;CL:0000136!1.69e-09!15;CL:0002334!6.31e-09!12;CL:0000048!3.46e-08!430;CL:0000359!6.10e-08!32;CL:0000723!7.87e-08!436;CL:0000034!3.46e-07!444 | |ontology_enrichment_celltype=CL:0000055!2.02e-24!180;CL:0000057!6.79e-18!75;CL:0000680!3.29e-17!57;CL:0000056!3.29e-17!57;CL:0000355!3.29e-17!57;CL:0000187!3.38e-16!54;CL:0000183!3.10e-13!59;CL:0000393!1.03e-12!60;CL:0000211!1.03e-12!60;CL:0000192!3.03e-12!42;CL:0000514!3.03e-12!42;CL:0002620!3.61e-11!23;CL:0000136!1.69e-09!15;CL:0002334!6.31e-09!12;CL:0000048!3.46e-08!430;CL:0000359!6.10e-08!32;CL:0000723!7.87e-08!436;CL:0000034!3.46e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.08e-11;23!CL:0000187;4.52e-10;55!CL:0000192;6.56e-10;43!CL:0002334;7.29e-10;12!CL:0000136;6.06e-09;13!CL:0000393;3.97e-08;61!CL:0000211;3.97e-08;61!CL:0000723;8.88e-08;61!CL:0000134;9.27e-08;55!CL:0000359;1.79e-07;32!CL:0000057;2.11e-07;73!CL:0000048;2.95e-07;58!CL:0002320;5.15e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.60e-19,76;CL:0000680,1.39e-18,58;CL:0000056,1.39e-18,58;CL:0000355,1.39e-18,58;CL:0000187,1.89e-17,55;CL:0000393,4.20e-14,61;CL:0000211,4.20e-14,61;CL:0000192,5.07e-13,43;CL:0000514,5.07e-13,43;CL:0002620,1.10e-11,23;CL:0000136,1.65e-10,15;CL:0000048,7.24e-10,427;CL:0002334,7.27e-10,12;CL:0000723,2.22e-09,433;CL:0000034,2.04e-08,441;CL:0000359,8.05e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000355;1.82e-10;58!CL:0000514;6.56e-10;43 | |||
|ontology_enrichment_disease=DOID:2394!3.74e-08!14 | |ontology_enrichment_disease=DOID:2394!3.74e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.17e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.13e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!8.93e-22!83;UBERON:0002329!8.93e-22!83;UBERON:0003077!8.93e-22!83;UBERON:0003059!8.93e-22!83;UBERON:0007282!8.93e-22!83;UBERON:0009618!8.93e-22!83;UBERON:0007285!8.93e-22!83;UBERON:0004290!1.86e-20!70;UBERON:0002385!7.50e-19!63;UBERON:0001015!7.50e-19!63;UBERON:0000383!7.50e-19!63;UBERON:0001134!3.28e-18!61;UBERON:0002036!3.28e-18!61;UBERON:0003082!3.28e-18!61;UBERON:0000486!4.29e-16!82;UBERON:0002199!4.56e-11!45;UBERON:0002416!4.56e-11!45;UBERON:0005256!6.61e-11!143;UBERON:0003102!9.21e-11!95;UBERON:0002100!4.67e-10!216;UBERON:0000475!6.22e-10!365;UBERON:0001013!3.00e-09!14;UBERON:0002097!6.83e-09!40;UBERON:0001135!2.41e-07!15;UBERON:0004872!5.86e-07!84 | |ontology_enrichment_uberon=UBERON:0000914!8.93e-22!83;UBERON:0002329!8.93e-22!83;UBERON:0003077!8.93e-22!83;UBERON:0003059!8.93e-22!83;UBERON:0007282!8.93e-22!83;UBERON:0009618!8.93e-22!83;UBERON:0007285!8.93e-22!83;UBERON:0004290!1.86e-20!70;UBERON:0002385!7.50e-19!63;UBERON:0001015!7.50e-19!63;UBERON:0000383!7.50e-19!63;UBERON:0001134!3.28e-18!61;UBERON:0002036!3.28e-18!61;UBERON:0003082!3.28e-18!61;UBERON:0000486!4.29e-16!82;UBERON:0002199!4.56e-11!45;UBERON:0002416!4.56e-11!45;UBERON:0005256!6.61e-11!143;UBERON:0003102!9.21e-11!95;UBERON:0002100!4.67e-10!216;UBERON:0000475!6.22e-10!365;UBERON:0001013!3.00e-09!14;UBERON:0002097!6.83e-09!40;UBERON:0001135!2.41e-07!15;UBERON:0004872!5.86e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;4.28e-13;31!UBERON:0001015;4.28e-13;31!UBERON:0000383;4.28e-13;31!UBERON:0001013;3.05e-10;14!UBERON:0001135;4.06e-08;15!UBERON:0002199;1.53e-07;46!UBERON:0002416;1.53e-07;46!UBERON:0002097;2.27e-07;41!UBERON:0004457;2.97e-07;9!UBERON:0000042;2.97e-07;9!UBERON:0002384;4.68e-07;198!UBERON:0001134;6.25e-07;16!UBERON:0002036;6.25e-07;16!UBERON:0003688;9.92e-07;6!UBERON:0002358;9.92e-07;6!UBERON:0003684;9.92e-07;6!UBERON:0001178;9.92e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.35e-21,71;UBERON:0003059,1.35e-21,71;UBERON:0007282,1.35e-21,71;UBERON:0004290,1.35e-21,71;UBERON:0009618,1.35e-21,71;UBERON:0007524,4.52e-21,73;UBERON:0003077,5.44e-21,72;UBERON:0007285,5.44e-21,72;UBERON:0002385,1.94e-20,64;UBERON:0001015,1.94e-20,64;UBERON:0000383,1.94e-20,64;UBERON:0001134,1.02e-19,62;UBERON:0002036,1.02e-19,62;UBERON:0003082,1.02e-19,62;UBERON:0007503,9.97e-18,78;UBERON:0000486,1.15e-17,83;UBERON:0005256,7.36e-13,122;UBERON:0002199,8.30e-12,46;UBERON:0002416,8.30e-12,46;UBERON:0003102,1.44e-11,99;UBERON:0003104,1.87e-10,160;UBERON:0009142,1.87e-10,160;UBERON:0001013,3.15e-10,14;UBERON:0002100,5.12e-10,199;UBERON:0002097,2.11e-09,41;UBERON:0000926,1.66e-08,315;UBERON:0004120,1.66e-08,315;UBERON:0006603,1.66e-08,315;UBERON:0001135,4.38e-08,15;UBERON:0000490,4.39e-07,148;UBERON:0003688,9.93e-07,6;UBERON:0002358,9.93e-07,6;UBERON:0003684,9.93e-07,6;UBERON:0001178,9.93e-07,6 | |||
|phase1_expression=299.042612279336,192.690471501885,302.770059998146,250.183245882826,128.277834100632,227.680354790196,88.6549573589087,53.0644693678538,37.8719160889766,4.42321085702716,0,0,0,0.990130823680373,1.65698687863958,10.0848771967766,10.2458069764076,5.84248072309899,7.3189919818576,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0.587200878669695,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.05399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,92.6466091993054,9.38981203585091,1.40648818027883,16.9876401620746,44.1177361359583,146.729523707314,0.795285947051099,10.705967146658,0,0,0.702678285545008,1.37528029272598,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,72.5579049475165,6.96467814155189,43.1653929451093,69.9881354627105,19.1520926387113,3.36406560085384,0,0.74000264525148,69.0888498587481,0,0,0.454072282934794,1.15235184896,0.234321431833797,0.624320153660641,2.85235910772225,11.8064457635923,4.22764195117554,4.20869655357142,4.21352420106745,6.32877930890169,1.10550885580591,8.57603983758853,493.021185772052,359.031581312465,10.0117749813183,1.43723628363248,1.85169725349473,1.62654075833553,4.43302584774693,104.91565139052,86.4295584153235,485.569406386121,0.113432183160021,72.6528024539891,105.283792687554,347.568317901681,85.2258712879703,272.264782247956,109.754870059438,75.5634436706255,111.054826614753,291.531519442306,92.3907613733459,150.961833773371,205.290492159891,61.0616499128577,57.6302001862102,21.195074038811,0,0,0,0,0,0,0.10366105501537,0,0,40.6768784057521,39.8809381679589,9.66944449467364,159.742567243001,54.8628406068885,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,15.6126707371658,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0,0,0.766765358330422,0.492663237895943,0.088048434013226,0.414656231081544,0.144119953416961,0.12624243342638,1.14296209725904,0,0,0,0,0,0,0,0,0.07333828582095,54.8112074812978,7.15312891703765,12.67954128834,97.8652269032323,42.6430491336601,0.514414748524284,0,0.532844358032199,57.7631094378916,4.34097284313154,4.11620168390384,21.1728519790928,58.9950634912626,11.087326221068,25.0194682959456,24.4029368408082,23.0937609630552,0,0,0,0,0,7.13184525203592,12.3064110667442,4.52047909610843,53.181106082249,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,11.9010746967566,0.500170521059677,0.813795071099207,53.6564822749482,39.4328065241727,38.7947940983479,113.861455372917,65.0043575411873,38.6592756895174,7.24311499047534,6.64225598535437,1.47495334833363,9.1227795191487,0,0,0,0,0,0,0,2.11673205330776,292.519105418338,434.297384405217,196.181406008718,310.481158646563,357.171659848559,96.9949144495953,74.2090332224955,29.4540515163072,43.1474992510899,41.9669767230565,19.212413879794,58.5700307438195,0,0,0,86.1108361234551,29.8629515531016,108.046517926565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,29.2636473079531,0,0,1.14853107599234,0,89.9830007127293,7.54031602678551,22.7991953329674,22.565040184741,15.2998595457829,54.0323831687416,38.5744405811848,10.7385550544287,9.25933170726069,0,0.192190067365106,0.127612712494584,0,27.8907329578371,62.0180323256361,48.0955716410814,19.0980819709175,2.12922412126809,48.7162475562041,5.93037501132544,1.5743737541619,1.116475108079,1.2655176988749,22.6849930769352,1.535386747868,39.7983258871546,53.7763488994833,1.56989728039846,150.373374539651,134.523144570667,124.998958888773,4.85237955775958,0,10.1102029497355,4.8763373908959,26.8084838594413,12.6780176108107,66.0659571214651,174.777113894789,25.9918668226558,17.0923256499298,11.2784625791007,8.33056681982149,4.05142873986681,49.8480011555441,0,8.98488144489275,0.563391205064483,26.2442774533414,1.27723753317057,0.35667105148125,70.2426906859784,288.795245087205,413.265090664677,0,0.349934720244983,0,1.34060455107157,0,33.6093368773102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.6731081233197,0,0,0,0,0,0,0,0,1.66963057534359,0,0,9.16540745954921,12.1564922833705,0,0,0,6.53183134089796,0,0,0,97.9529017974751,0,0,0,1.66982576691332,1.99613798001194,0,0,28.9999830173917,0,0,4.49136595359079,0,0,0,0,0.120596438625408,0,0,0,1.75508317723178,19.8268003604562,0,87.8002449528325,0.227884111694002,0,0,0,0.31900115973192,4.57987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,31.2255202696787,12.8316330436061,0,0,0,0,10.4335094148843,0.234264445725339,0,0,0,10.2591944740842,3.62972148145992,0,205.482756951843,0,0,0,0,0,0,0,0,0,0,0,24.4617335538842,0,11.320490760823,15.4949352222713,9.68962393227869,31.6184193752247,0,23.2760163003948,0,0.397429223405979,0,0,0,48.8807357953117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,51.667244235367,8.70809611244398,103.373715539061,1.39775300349294,2.14613024068285,22.763488659071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| 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| ||
|short_description=p1@FGF7 | |short_description=p1@FGF7 | ||
}} | }} |
Latest revision as of 22:36, 17 September 2015
Short description: | p1@FGF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FGF7_5end |
Coexpression cluster: | C1741_Fibroblast_Synoviocyte_sacrococcigeal_Preadipocyte_tenocyte_Adipocyte_mesenchymal |
Association with transcript: | 0bp_to_ENST00000560765, ENST00000560979_5end |
EntrezGene: | FGF7 |
HGNC: | 3685 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.60e-19 | 76 |
muscle precursor cell | 1.39e-18 | 58 |
myoblast | 1.39e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.39e-18 | 58 |
muscle cell | 1.89e-17 | 55 |
electrically responsive cell | 4.20e-14 | 61 |
electrically active cell | 4.20e-14 | 61 |
smooth muscle cell | 5.07e-13 | 43 |
smooth muscle myoblast | 5.07e-13 | 43 |
skin fibroblast | 1.10e-11 | 23 |
fat cell | 1.65e-10 | 15 |
multi fate stem cell | 7.24e-10 | 427 |
preadipocyte | 7.27e-10 | 12 |
somatic stem cell | 2.22e-09 | 433 |
stem cell | 2.04e-08 | 441 |
vascular associated smooth muscle cell | 8.05e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
somite | 1.35e-21 | 71 |
presomitic mesoderm | 1.35e-21 | 71 |
presumptive segmental plate | 1.35e-21 | 71 |
dermomyotome | 1.35e-21 | 71 |
trunk paraxial mesoderm | 1.35e-21 | 71 |
dense mesenchyme tissue | 4.52e-21 | 73 |
paraxial mesoderm | 5.44e-21 | 72 |
presumptive paraxial mesoderm | 5.44e-21 | 72 |
muscle tissue | 1.94e-20 | 64 |
musculature | 1.94e-20 | 64 |
musculature of body | 1.94e-20 | 64 |
skeletal muscle tissue | 1.02e-19 | 62 |
striated muscle tissue | 1.02e-19 | 62 |
myotome | 1.02e-19 | 62 |
epithelial vesicle | 9.97e-18 | 78 |
multilaminar epithelium | 1.15e-17 | 83 |
trunk mesenchyme | 7.36e-13 | 122 |
integument | 8.30e-12 | 46 |
integumental system | 8.30e-12 | 46 |
surface structure | 1.44e-11 | 99 |
mesenchyme | 1.87e-10 | 160 |
entire embryonic mesenchyme | 1.87e-10 | 160 |
adipose tissue | 3.15e-10 | 14 |
trunk | 5.12e-10 | 199 |
skin of body | 2.11e-09 | 41 |
mesoderm | 1.66e-08 | 315 |
mesoderm-derived structure | 1.66e-08 | 315 |
presumptive mesoderm | 1.66e-08 | 315 |
smooth muscle tissue | 4.38e-08 | 15 |
unilaminar epithelium | 4.39e-07 | 148 |
omentum | 9.93e-07 | 6 |
peritoneum | 9.93e-07 | 6 |
abdominal cavity | 9.93e-07 | 6 |
visceral peritoneum | 9.93e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.13e-09 | 14 |