FFCP PHASE1:Hg19::chr17:7465216..7465274,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26168 | |EntrezGene=26168 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17862 | |HGNC=17862 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H4L4 | |UniProt=Q9H4L4 | ||
|association_with_transcript=0bp_to_ENST00000321337_5end | |association_with_transcript=0bp_to_ENST00000321337_5end | ||
|cluster_id=chr17:7465216..7465274,+ | |||
|description=CAGE_peak_1_at_SENP3_5end | |description=CAGE_peak_1_at_SENP3_5end | ||
|id=chr17:7465216..7465274,+ | |id=chr17:7465216..7465274,+ | ||
|ontology_enrichment_celltype=CL:0002321!1.21e-16!248;CL:0000220!1.53e-16!246;CL:0000222!1.34e-15!119;CL:0000066!7.35e-15!254;CL:0000055!8.78e-10!180;CL:0000183!8.74e-09!59;CL:0000213!9.03e-08!57;CL:0000215!9.03e-08!57;CL:0000680!1.31e-07!57;CL:0000056!1.31e-07!57;CL:0000355!1.31e-07!57;CL:0002078!2.46e-07!44;CL:0000187!3.26e-07!54;CL:0000076!3.45e-07!62;CL:0000393!4.85e-07!60;CL:0000211!4.85e-07!60 | |ontology_enrichment_celltype=CL:0002321!1.21e-16!248;CL:0000220!1.53e-16!246;CL:0000222!1.34e-15!119;CL:0000066!7.35e-15!254;CL:0000055!8.78e-10!180;CL:0000183!8.74e-09!59;CL:0000213!9.03e-08!57;CL:0000215!9.03e-08!57;CL:0000680!1.31e-07!57;CL:0000056!1.31e-07!57;CL:0000355!1.31e-07!57;CL:0002078!2.46e-07!44;CL:0000187!3.26e-07!54;CL:0000076!3.45e-07!62;CL:0000393!4.85e-07!60;CL:0000211!4.85e-07!60 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.59e-17,250;CL:0000222,9.40e-16,121;CL:0000066,6.74e-15,253;CL:0000213,5.26e-08,58;CL:0000215,5.26e-08,58;CL:0002078,1.41e-07,45;CL:0000680,1.66e-07,58;CL:0000056,1.66e-07,58;CL:0000355,1.66e-07,58;CL:0000187,4.13e-07,55;CL:0000393,5.97e-07,61;CL:0000211,5.97e-07,61;CL:0000076,7.90e-07,63;CL:0000115,9.55e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!6.15e-15!312;UBERON:0000481!6.93e-15!347;UBERON:0000483!2.06e-14!309;UBERON:0003104!6.89e-13!238;UBERON:0009142!6.89e-13!238;UBERON:0003914!1.81e-12!118;UBERON:0004872!5.36e-12!84;UBERON:0000477!4.57e-11!286;UBERON:0001981!2.41e-10!60;UBERON:0007500!2.41e-10!60;UBERON:0004537!2.41e-10!60;UBERON:0006965!2.41e-10!60;UBERON:0000025!2.56e-10!194;UBERON:0000055!7.95e-10!69;UBERON:0002049!1.09e-09!79;UBERON:0007798!1.09e-09!79;UBERON:0005256!1.21e-09!143;UBERON:0000490!2.00e-09!138;UBERON:0000475!2.01e-09!365;UBERON:0000064!2.28e-09!219;UBERON:0001048!2.78e-09!168;UBERON:0002100!5.36e-09!216;UBERON:0004111!1.41e-08!241;UBERON:0001637!2.21e-08!42;UBERON:0003509!2.21e-08!42;UBERON:0004572!2.21e-08!42;UBERON:0004290!1.18e-07!70;UBERON:0000914!3.13e-07!83;UBERON:0002329!3.13e-07!83;UBERON:0003077!3.13e-07!83;UBERON:0003059!3.13e-07!83;UBERON:0007282!3.13e-07!83;UBERON:0009618!3.13e-07!83;UBERON:0007285!3.13e-07!83;UBERON:0000486!4.30e-07!82;UBERON:0001737!6.84e-07!9 | |ontology_enrichment_uberon=UBERON:0000119!6.15e-15!312;UBERON:0000481!6.93e-15!347;UBERON:0000483!2.06e-14!309;UBERON:0003104!6.89e-13!238;UBERON:0009142!6.89e-13!238;UBERON:0003914!1.81e-12!118;UBERON:0004872!5.36e-12!84;UBERON:0000477!4.57e-11!286;UBERON:0001981!2.41e-10!60;UBERON:0007500!2.41e-10!60;UBERON:0004537!2.41e-10!60;UBERON:0006965!2.41e-10!60;UBERON:0000025!2.56e-10!194;UBERON:0000055!7.95e-10!69;UBERON:0002049!1.09e-09!79;UBERON:0007798!1.09e-09!79;UBERON:0005256!1.21e-09!143;UBERON:0000490!2.00e-09!138;UBERON:0000475!2.01e-09!365;UBERON:0000064!2.28e-09!219;UBERON:0001048!2.78e-09!168;UBERON:0002100!5.36e-09!216;UBERON:0004111!1.41e-08!241;UBERON:0001637!2.21e-08!42;UBERON:0003509!2.21e-08!42;UBERON:0004572!2.21e-08!42;UBERON:0004290!1.18e-07!70;UBERON:0000914!3.13e-07!83;UBERON:0002329!3.13e-07!83;UBERON:0003077!3.13e-07!83;UBERON:0003059!3.13e-07!83;UBERON:0007282!3.13e-07!83;UBERON:0009618!3.13e-07!83;UBERON:0007285!3.13e-07!83;UBERON:0000486!4.30e-07!82;UBERON:0001737!6.84e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0003914;4.73e-07;74!UBERON:0001737;6.81e-07;9!UBERON:0001557;6.81e-07;9 | |||
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| ||
|short_description=p1@SENP3 | |short_description=p1@SENP3 | ||
}} | }} |
Latest revision as of 16:27, 17 September 2015
Short description: | p1@SENP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SENP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000321337_5end |
EntrezGene: | SENP3 |
HGNC: | 17862 |
UniProt: | Q9H4L4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.59e-17 | 250 |
mesodermal cell | 9.40e-16 | 121 |
epithelial cell | 6.74e-15 | 253 |
lining cell | 5.26e-08 | 58 |
barrier cell | 5.26e-08 | 58 |
meso-epithelial cell | 1.41e-07 | 45 |
muscle precursor cell | 1.66e-07 | 58 |
myoblast | 1.66e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.66e-07 | 58 |
muscle cell | 4.13e-07 | 55 |
electrically responsive cell | 5.97e-07 | 61 |
electrically active cell | 5.97e-07 | 61 |
squamous epithelial cell | 7.90e-07 | 63 |
endothelial cell | 9.55e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
cell layer | 3.28e-14 | 309 |
epithelium | 1.07e-13 | 306 |
epithelial tube | 1.48e-12 | 117 |
splanchnic layer of lateral plate mesoderm | 3.44e-12 | 83 |
tube | 1.03e-10 | 192 |
epithelial tube open at both ends | 1.44e-10 | 59 |
blood vessel | 1.44e-10 | 59 |
blood vasculature | 1.44e-10 | 59 |
vascular cord | 1.44e-10 | 59 |
unilaminar epithelium | 1.48e-10 | 148 |
mesenchyme | 4.35e-10 | 160 |
entire embryonic mesenchyme | 4.35e-10 | 160 |
vessel | 5.14e-10 | 68 |
vasculature | 7.45e-10 | 78 |
vascular system | 7.45e-10 | 78 |
epithelial vesicle | 1.23e-09 | 78 |
trunk | 1.87e-09 | 199 |
anatomical conduit | 9.17e-09 | 240 |
artery | 2.21e-08 | 42 |
arterial blood vessel | 2.21e-08 | 42 |
arterial system | 2.21e-08 | 42 |
trunk mesenchyme | 3.27e-08 | 122 |
primordium | 4.14e-08 | 160 |
paraxial mesoderm | 8.75e-08 | 72 |
presumptive paraxial mesoderm | 8.75e-08 | 72 |
somite | 1.43e-07 | 71 |
presomitic mesoderm | 1.43e-07 | 71 |
presumptive segmental plate | 1.43e-07 | 71 |
dermomyotome | 1.43e-07 | 71 |
trunk paraxial mesoderm | 1.43e-07 | 71 |
dense mesenchyme tissue | 1.51e-07 | 73 |
multilaminar epithelium | 5.00e-07 | 83 |
larynx | 6.84e-07 | 9 |