FFCP PHASE1:Hg19::chr17:62495640..62495642,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:62495640..62495642,-
|short_description=p11@DDX5
|description=CAGE_peak_11_at_DDX5_5end
|association_with_transcript=-208bp_to_AL133585_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1655 | |EntrezGene=1655 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2746 | |HGNC=2746 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-208bp_to_AL133585_5end | |||
|cluster_id=chr17:62495640..62495642,- | |||
|description=CAGE_peak_11_at_DDX5_5end | |||
|id=chr17:62495640..62495642,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.04e-09!143;DOID:162!1.15e-08!235;DOID:14566!2.89e-08!239;DOID:305!6.02e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.15e-08;22!UBERON:0002780;2.13e-07;41!UBERON:0001890;2.13e-07;41!UBERON:0001950;3.70e-07;20!UBERON:0003528;5.20e-07;34!UBERON:0002020;5.20e-07;34!UBERON:0000073;5.59e-07;53!UBERON:0002616;5.59e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.29e-10,53;UBERON:0002616,2.29e-10,53;UBERON:0003528,7.54e-10,34;UBERON:0002020,7.54e-10,34;UBERON:0001016,1.37e-09,89;UBERON:0001049,1.45e-09,56;UBERON:0005068,1.45e-09,56;UBERON:0006241,1.45e-09,56;UBERON:0007135,1.45e-09,56;UBERON:0002780,1.10e-08,41;UBERON:0001890,1.10e-08,41;UBERON:0003080,1.10e-08,41;UBERON:0006240,1.10e-08,41;UBERON:0001017,2.60e-08,81;UBERON:0002619,2.74e-08,22;UBERON:0000955,8.53e-08,68;UBERON:0006238,8.53e-08,68;UBERON:0002791,1.17e-07,32;UBERON:0001950,1.85e-07,20;UBERON:0000956,4.42e-07,25;UBERON:0000203,4.42e-07,25;UBERON:0001893,4.62e-07,34 | |||
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|phase1_expression=0,0.428201047781966,0.563817616383885,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0.572471974262113,0,0,0.152826811495903,0.246301768349837,0.157421562627358,0,0.767658796194425,0.464448369948228,0,0.30120591877825,0,0.387336002901508,0.284338464974843,0,0.553995408531877,1.80490002723128,1.08505435357926,0.447830948479849,0.32389366601898,0,0.290796477559129,0.377875943688809,0,0.697287110717054,1.23350366406548,0.309706370895104,1.1507695692886,1.2808035326455,0.236482229888585,1.37898272294647,0,0,0.376484679085209,0.545812300115692,0,1.22433556948361,0,0,0.659702600373432,0.199463657621632,0,1.16083695451434,0.56738522469114,1.86846674698672,1.00499466102697,0,0,1.81619850790011,0.368277635987565,0,0,0,0,0,0,0.16072558669708,1.14005097496499,0.39783335439818,0.182664153764634,0,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,0,0,0,1.1384259382189,2.34894875748376,1.14681968437569,0,0,0,0.786839080455332,3.53709686474248,0.822405995998037,0.167186495390678,0,1.4203434172042,0,0,0,0.221533894583621,0,0.25618263945135,0.260118695119756,0.822189523018381,1.10540007114339,0.869409257205157,0.444859689486181,0.535081656179426,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0.473554504088034,0.821127996921047,1.00803371612366,1.87208137048455,0.724122019413995,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.196468613246569,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0.476981248610684,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,1.31780417436063,0,0,0,0,0.529636723252875,0,0,0.560677600142307,0,0,0.311211035399766,0.404132016209064,0.163461903113459,0,1.15235184896,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.737005903870608,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,0,0.85422955527427,0,0,0,0,0,0.168776332241266,0.194874010322397,0.252433774244115,0.276149695926898,0.161646056818812,0,0,0,0.193260853163297,0.272746120590835,0,0.487894824518382,0,0.580969714347592,0.207322110030741,0.504641701751257,0.72995471815166,0,0,0,1.85747171212792,1.44375896333917,0.473227200159376,0.337169380156203,0.241011029883482,0.441175890929576,0.217879444092406,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,1.96565443335525,0,0.441463099414651,0.122988438543114,0,0.219500570817251,0,0,0.277765335475589,0.325808305310325,0,0,0.231860809950154,0,0.433099343283221,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0,0,0,0,0,0.268675568108545,0,0,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.22001485746285,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0.791951872933429,0.301439377059586,0,0.599837947092342,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,1.34502172792233,0.985153801009636,1.94064817373566,1.66845947163673,0,0,0,1.17261385734044,1.91381625495949,0.749007023947182,2.99161459204025,0.414415513436035,0.24538298343828,0,0,0.415941723061614,0.356857977594324,1.10391690523754,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,1.03384013061444,0.647142602455851,0.426910231213777,0.303127571446259,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0.384417447767103,0.511707249066704,0.160853921143607,0,0.462629081407967,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.120859449591622,1.20303882181971,0.644566922551274,0.114814448164607,1.0925470080403,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.309123034943167,0.27470839445503,0.330037999682352,0,0,1.6068392984416,0.676695028044854,0,0.15350367472613,0.275673144969061,0.322260734604821,0.145016693914229,0.255679882248303,0.178064071293475,0.165284915360978,0.192190067365106,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0.42793898803392,0,0,0,0,0.117812402345686,0.404364963146632,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,1.32687795048244,0,0,0.655894752046633,0.202910376962704,0,0,0,0.0982490410131212,0,0,0.633322905892992,0.987884678879706,0,0.349934720244983,0.48111056362756,0,0,0.282431402330337,0.43050537267123,0,0,0.229723400206959,0,0,0,0.952927101831156,0.411362273086194,0,0.540031437238115,0,0.106824071127473,0.962479855263359,0,0.743212700502875,0.432807638929335,0.355709216742071,0.478278818186467,0.199579371432817,0.191505370132367,0.423347165447766,0,0.561594356226918,0.912938716132769,0.156679895773023,2.50634477090067,0.169291777801603,0,0.403599414382095,0.425846237690326,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0.66866030566487,1.98895302764489,0.71623345421307,0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| ||
|short_description=p11@DDX5 | |||
}} | }} |
Latest revision as of 19:32, 16 September 2015
Short description: | p11@DDX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_DDX5_5end |
Coexpression cluster: | NA |
Association with transcript: | -208bp_to_AL133585_5end |
EntrezGene: | DDX5 |
HGNC: | 2746 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.29e-10 | 53 |
regional part of brain | 2.29e-10 | 53 |
brain grey matter | 7.54e-10 | 34 |
gray matter | 7.54e-10 | 34 |
nervous system | 1.37e-09 | 89 |
neural tube | 1.45e-09 | 56 |
neural rod | 1.45e-09 | 56 |
future spinal cord | 1.45e-09 | 56 |
neural keel | 1.45e-09 | 56 |
regional part of forebrain | 1.10e-08 | 41 |
forebrain | 1.10e-08 | 41 |
anterior neural tube | 1.10e-08 | 41 |
future forebrain | 1.10e-08 | 41 |
central nervous system | 2.60e-08 | 81 |
regional part of cerebral cortex | 2.74e-08 | 22 |
brain | 8.53e-08 | 68 |
future brain | 8.53e-08 | 68 |
regional part of telencephalon | 1.17e-07 | 32 |
neocortex | 1.85e-07 | 20 |
cerebral cortex | 4.42e-07 | 25 |
pallium | 4.42e-07 | 25 |
telencephalon | 4.62e-07 | 34 |