FFCP PHASE1:Hg19::chr2:95940186..95940205,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=150696 | |EntrezGene=150696 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20685 | |HGNC=20685 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N271,B2R879 | |UniProt=Q8N271,B2R879 | ||
|association_with_transcript=0bp_to_ENST00000317620,ENST00000317668,ENST00000403131,NM_001165977,NM_001165978,NM_144707,uc002suh.1,uc002sui.2,uc002suj.2,uc002suk.2,uc002sul.2_5end | |association_with_transcript=0bp_to_ENST00000317620,ENST00000317668,ENST00000403131,NM_001165977,NM_001165978,NM_144707,uc002suh.1,uc002sui.2,uc002suj.2,uc002suk.2,uc002sul.2_5end | ||
|cluster_id=chr2:95940186..95940205,+ | |||
|description=CAGE_peak_2_at_PROM2_5end | |description=CAGE_peak_2_at_PROM2_5end | ||
|id=chr2:95940186..95940205,+ | |id=chr2:95940186..95940205,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.94e-23!254;CL:0002076!2.95e-19!43;CL:0000223!1.32e-13!59;CL:0002251!1.84e-10!21;CL:0002368!3.56e-10!13;CL:0002159!3.35e-09!13;CL:0000244!3.58e-07!4;CL:0000731!3.58e-07!4 | |ontology_enrichment_celltype=CL:0000066!1.94e-23!254;CL:0002076!2.95e-19!43;CL:0000223!1.32e-13!59;CL:0002251!1.84e-10!21;CL:0002368!3.56e-10!13;CL:0002159!3.35e-09!13;CL:0000244!3.58e-07!4;CL:0000731!3.58e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.82e-12;42!CL:0002159;2.46e-09;14!CL:0000244;3.88e-09;4!CL:0000731;3.88e-09;4!CL:0002251;8.75e-09;20!CL:0002327;6.06e-08;4!CL:0002368;9.48e-08;13!CL:0002621;2.49e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.64e-21,253;CL:0002076,1.04e-16,42;CL:0000223,1.73e-11,58;CL:0002159,2.17e-09,14;CL:0000244,3.77e-09,4;CL:0000731,3.77e-09,4;CL:0002251,8.73e-09,20;CL:0002327,6.72e-08,4;CL:0002368,8.90e-08,13;CL:0002621,2.49e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;6.27e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!1.36e-14!14;DOID:305!1.91e-10!106;DOID:0050687!3.16e-07!143 | |ontology_enrichment_disease=DOID:1749!1.36e-14!14;DOID:305!1.91e-10!106;DOID:0050687!3.16e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;5.93e-17;14!DOID:5093;3.04e-07;4!DOID:1612;3.04e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.03e-17,14;DOID:305,1.19e-09,106;DOID:5093,2.89e-07,4;DOID:1612,2.89e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.92e-24!169;UBERON:0000925!1.92e-24!169;UBERON:0006595!1.92e-24!169;UBERON:0001004!7.84e-17!72;UBERON:0001007!1.97e-16!155;UBERON:0001555!1.97e-16!155;UBERON:0007026!1.97e-16!155;UBERON:0000464!2.48e-14!104;UBERON:0000077!5.01e-14!130;UBERON:0000161!6.28e-14!35;UBERON:0000166!8.45e-13!21;UBERON:0004921!3.82e-12!129;UBERON:0004185!3.82e-12!129;UBERON:0000466!1.56e-11!126;UBERON:0005153!8.31e-11!37;UBERON:0000065!1.90e-10!53;UBERON:0005631!2.58e-10!14;UBERON:0000158!2.58e-10!14;UBERON:0005911!2.60e-10!82;UBERON:0001008!7.60e-10!45;UBERON:0000165!1.50e-09!28;UBERON:0000930!1.50e-09!28;UBERON:0005178!2.56e-09!34;UBERON:0002224!2.56e-09!34;UBERON:0001041!2.64e-09!98;UBERON:0006554!3.45e-09!44;UBERON:0005181!6.71e-09!35;UBERON:0000915!3.19e-08!52;UBERON:0004807!5.29e-08!28;UBERON:0005157!6.19e-08!51;UBERON:0000058!6.77e-08!26;UBERON:0004175!9.45e-08!25;UBERON:0005177!9.48e-08!107;UBERON:0000365!1.18e-07!5;UBERON:0002048!1.52e-07!22;UBERON:0000117!1.52e-07!22;UBERON:0000171!1.52e-07!22;UBERON:0000170!1.52e-07!22;UBERON:0005597!1.52e-07!22;UBERON:0000118!1.52e-07!22;UBERON:0001044!3.24e-07!6;UBERON:0003293!3.24e-07!6;UBERON:0003294!3.24e-07!6;UBERON:0010047!3.24e-07!6;UBERON:0000167!3.24e-07!6;UBERON:0005156!4.74e-07!59;UBERON:0000990!4.74e-07!59;UBERON:0009569!5.17e-07!113;UBERON:0002553!6.89e-07!70;UBERON:0000974!8.77e-07!10;UBERON:0000062!9.63e-07!511 | |ontology_enrichment_uberon=UBERON:0004119!1.92e-24!169;UBERON:0000925!1.92e-24!169;UBERON:0006595!1.92e-24!169;UBERON:0001004!7.84e-17!72;UBERON:0001007!1.97e-16!155;UBERON:0001555!1.97e-16!155;UBERON:0007026!1.97e-16!155;UBERON:0000464!2.48e-14!104;UBERON:0000077!5.01e-14!130;UBERON:0000161!6.28e-14!35;UBERON:0000166!8.45e-13!21;UBERON:0004921!3.82e-12!129;UBERON:0004185!3.82e-12!129;UBERON:0000466!1.56e-11!126;UBERON:0005153!8.31e-11!37;UBERON:0000065!1.90e-10!53;UBERON:0005631!2.58e-10!14;UBERON:0000158!2.58e-10!14;UBERON:0005911!2.60e-10!82;UBERON:0001008!7.60e-10!45;UBERON:0000165!1.50e-09!28;UBERON:0000930!1.50e-09!28;UBERON:0005178!2.56e-09!34;UBERON:0002224!2.56e-09!34;UBERON:0001041!2.64e-09!98;UBERON:0006554!3.45e-09!44;UBERON:0005181!6.71e-09!35;UBERON:0000915!3.19e-08!52;UBERON:0004807!5.29e-08!28;UBERON:0005157!6.19e-08!51;UBERON:0000058!6.77e-08!26;UBERON:0004175!9.45e-08!25;UBERON:0005177!9.48e-08!107;UBERON:0000365!1.18e-07!5;UBERON:0002048!1.52e-07!22;UBERON:0000117!1.52e-07!22;UBERON:0000171!1.52e-07!22;UBERON:0000170!1.52e-07!22;UBERON:0005597!1.52e-07!22;UBERON:0000118!1.52e-07!22;UBERON:0001044!3.24e-07!6;UBERON:0003293!3.24e-07!6;UBERON:0003294!3.24e-07!6;UBERON:0010047!3.24e-07!6;UBERON:0000167!3.24e-07!6;UBERON:0005156!4.74e-07!59;UBERON:0000990!4.74e-07!59;UBERON:0009569!5.17e-07!113;UBERON:0002553!6.89e-07!70;UBERON:0000974!8.77e-07!10;UBERON:0000062!9.63e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0000161;4.74e-10;19!UBERON:0000166;4.74e-10;19!UBERON:0000486;5.25e-08;12!UBERON:0001911;6.06e-08;4!UBERON:0001987;1.32e-07;4!UBERON:0000974;2.38e-07;6!UBERON:0001949;2.49e-07;3!UBERON:0000365;2.95e-07;5!UBERON:0000305;3.14e-07;7!UBERON:0000478;3.25e-07;24!UBERON:0000165;3.49e-07;28!UBERON:0004807;6.81e-07;22!UBERON:0001041;9.47e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.84e-19,160;UBERON:0000925,4.84e-19,160;UBERON:0006595,4.84e-19,160;UBERON:0001008,2.73e-14,48;UBERON:0006554,2.23e-13,47;UBERON:0000161,5.87e-12,36;UBERON:0005631,8.40e-12,14;UBERON:0000158,8.40e-12,14;UBERON:0001007,8.17e-11,145;UBERON:0001555,8.17e-11,145;UBERON:0007026,8.17e-11,145;UBERON:0000166,6.31e-10,22;UBERON:0001004,8.33e-10,74;UBERON:0004175,1.11e-09,25;UBERON:0001911,6.72e-08,4;UBERON:0005333,6.72e-08,4;UBERON:0008425,6.72e-08,4;UBERON:0005311,6.72e-08,4;UBERON:0004921,1.16e-07,118;UBERON:0001987,1.51e-07,4;UBERON:0004340,1.51e-07,4;UBERON:0005153,1.53e-07,37;UBERON:0001949,2.49e-07,3;UBERON:0000365,2.88e-07,5;UBERON:0000305,3.38e-07,7;UBERON:0000478,3.65e-07,24;UBERON:0003102,4.95e-07,99;UBERON:0005911,5.73e-07,82;UBERON:0005157,5.77e-07,47;UBERON:0000165,7.82e-07,29;UBERON:0000930,7.82e-07,29 | |||
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| ||
|short_description=p2@PROM2 | |short_description=p2@PROM2 | ||
}} | }} |
Latest revision as of 23:33, 18 September 2015
Short description: | p2@PROM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PROM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000317620, ENST00000317668, ENST00000403131, NM_001165977, NM_001165978, NM_144707, uc002suh.1, uc002sui.2, uc002suj.2, uc002suk.2, uc002sul.2_5end |
EntrezGene: | PROM2 |
HGNC: | 20685 |
UniProt: | Q8N271B2R879 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.64e-21 | 253 |
endo-epithelial cell | 1.04e-16 | 42 |
endodermal cell | 1.73e-11 | 58 |
general ecto-epithelial cell | 2.17e-09 | 14 |
transitional epithelial cell | 3.77e-09 | 4 |
urothelial cell | 3.77e-09 | 4 |
epithelial cell of alimentary canal | 8.73e-09 | 20 |
mammary gland epithelial cell | 6.72e-08 | 4 |
respiratory epithelial cell | 8.90e-08 | 13 |
gingival epithelial cell | 2.49e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.84e-19 | 160 |
endoderm | 4.84e-19 | 160 |
presumptive endoderm | 4.84e-19 | 160 |
renal system | 2.73e-14 | 48 |
urinary system structure | 2.23e-13 | 47 |
orifice | 5.87e-12 | 36 |
extraembryonic membrane | 8.40e-12 | 14 |
membranous layer | 8.40e-12 | 14 |
digestive system | 8.17e-11 | 145 |
digestive tract | 8.17e-11 | 145 |
primitive gut | 8.17e-11 | 145 |
oral opening | 6.31e-10 | 22 |
respiratory system | 8.33e-10 | 74 |
internal genitalia | 1.11e-09 | 25 |
mammary gland | 6.72e-08 | 4 |
mammary bud | 6.72e-08 | 4 |
mammary ridge | 6.72e-08 | 4 |
mammary placode | 6.72e-08 | 4 |
subdivision of digestive tract | 1.16e-07 | 118 |
placenta | 1.51e-07 | 4 |
allantois | 1.51e-07 | 4 |
epithelial bud | 1.53e-07 | 37 |
gingival epithelium | 2.49e-07 | 3 |
urothelium | 2.88e-07 | 5 |
amnion | 3.38e-07 | 7 |
extraembryonic structure | 3.65e-07 | 24 |
surface structure | 4.95e-07 | 99 |
endo-epithelium | 5.73e-07 | 82 |
epithelial fold | 5.77e-07 | 47 |
mouth | 7.82e-07 | 29 |
stomodeum | 7.82e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.03e-17 | 14 |
carcinoma | 1.19e-09 | 106 |
thoracic cancer | 2.89e-07 | 4 |
breast cancer | 2.89e-07 | 4 |