FFCP PHASE1:Hg19::chr3:188664953..188664966,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285386 | |EntrezGene=285386 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24759 | |HGNC=24759 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZUI0 | |UniProt=Q6ZUI0 | ||
|association_with_transcript=-36bp_to_ENST00000433971,uc003frv.1_5end | |association_with_transcript=-36bp_to_ENST00000433971,uc003frv.1_5end | ||
|cluster_id=chr3:188664953..188664966,+ | |||
|coexpression_cluster_id=C602 | |||
|description=CAGE_peak_12_at_TPRG1_5end | |description=CAGE_peak_12_at_TPRG1_5end | ||
|id=chr3:188664953..188664966,+ | |id=chr3:188664953..188664966,+ | ||
|ontology_enrichment_celltype=CL:0002194!4.31e-33!63;CL:0000576!4.31e-33!63;CL:0000040!4.31e-33!63;CL:0000559!4.31e-33!63;CL:0002009!9.71e-32!65;CL:0000839!1.07e-28!70;CL:0000557!3.85e-28!71;CL:0000766!1.40e-25!76;CL:0002057!1.43e-24!42;CL:0000860!2.07e-22!45;CL:0000763!5.46e-15!112;CL:0000049!5.46e-15!112;CL:0002087!1.33e-12!119;CL:0002031!1.06e-11!124;CL:0000738!2.74e-09!140;CL:0002032!4.24e-07!165;CL:0000837!4.24e-07!165 | |ontology_enrichment_celltype=CL:0002194!4.31e-33!63;CL:0000576!4.31e-33!63;CL:0000040!4.31e-33!63;CL:0000559!4.31e-33!63;CL:0002009!9.71e-32!65;CL:0000839!1.07e-28!70;CL:0000557!3.85e-28!71;CL:0000766!1.40e-25!76;CL:0002057!1.43e-24!42;CL:0000860!2.07e-22!45;CL:0000763!5.46e-15!112;CL:0000049!5.46e-15!112;CL:0002087!1.33e-12!119;CL:0002031!1.06e-11!124;CL:0000738!2.74e-09!140;CL:0002032!4.24e-07!165;CL:0000837!4.24e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.86e-49;6!CL:0000473;7.47e-40;39!CL:0000234;7.47e-40;39!CL:0000860;2.91e-21;33!CL:0002057;2.91e-21;33!CL:0000766;1.42e-16;69!CL:0000576;1.16e-10;48!CL:0000047;4.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.22e-49,6;CL:0000473,1.51e-39,48;CL:0000234,1.51e-39,48;CL:0002194,1.72e-36,59;CL:0000576,1.72e-36,59;CL:0000040,1.72e-36,59;CL:0000559,1.72e-36,59;CL:0002009,2.93e-35,61;CL:0000839,1.66e-32,66;CL:0000557,5.29e-32,67;CL:0000766,1.07e-29,72;CL:0000763,2.58e-19,108;CL:0000049,2.58e-19,108;CL:0002087,4.85e-18,115;CL:0002031,3.20e-17,120;CL:0000860,5.78e-17,42;CL:0002057,5.78e-17,42;CL:0000738,5.38e-15,136;CL:0002032,2.15e-12,161;CL:0000837,2.15e-12,161;CL:0000037,8.42e-12,168;CL:0000988,4.16e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;6.25e-14;42!CL:0000049;3.28e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002134;6.42e-13;1!UBERON:0005208;6.42e-13;1!UBERON:0004145;6.42e-13;1!UBERON:0005946;6.42e-13;1!UBERON:0005965;6.42e-13;1!UBERON:0002078;6.42e-13;1!UBERON:0002081;4.29e-07;2!UBERON:0002133;4.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.58e-28,76;UBERON:0001474,6.50e-26,82;UBERON:0004765,1.75e-23,90;UBERON:0002405,1.12e-22,93;UBERON:0002390,1.91e-21,98;UBERON:0003061,1.91e-21,98;UBERON:0001434,5.51e-21,100;UBERON:0002193,2.58e-19,108;UBERON:0002134,5.38e-13,1;UBERON:0005208,5.38e-13,1;UBERON:0005946,5.38e-13,1;UBERON:0005965,5.38e-13,1;UBERON:0002078,5.38e-13,1;UBERON:0002204,6.98e-12,167;UBERON:0003081,4.87e-11,203;UBERON:0002081,3.93e-07,2;UBERON:0002133,3.93e-07,2;UBERON:0010227,3.93e-07,2 | |||
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| ||
|short_description=p12@TPRG1 | |short_description=p12@TPRG1 | ||
}} | }} |
Latest revision as of 08:32, 17 September 2015
Short description: | p12@TPRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TPRG1_5end |
Coexpression cluster: | C602_Macrophage_Monocytederived_CD14_Mast_Dendritic_lung_adipose |
Association with transcript: | -36bp_to_ENST00000433971, uc003frv.1_5end |
EntrezGene: | TPRG1 |
HGNC: | 24759 |
UniProt: | Q6ZUI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.22e-49 | 6 |
defensive cell | 1.51e-39 | 48 |
phagocyte | 1.51e-39 | 48 |
monopoietic cell | 1.72e-36 | 59 |
monocyte | 1.72e-36 | 59 |
monoblast | 1.72e-36 | 59 |
promonocyte | 1.72e-36 | 59 |
macrophage dendritic cell progenitor | 2.93e-35 | 61 |
myeloid lineage restricted progenitor cell | 1.66e-32 | 66 |
granulocyte monocyte progenitor cell | 5.29e-32 | 67 |
myeloid leukocyte | 1.07e-29 | 72 |
myeloid cell | 2.58e-19 | 108 |
common myeloid progenitor | 2.58e-19 | 108 |
nongranular leukocyte | 4.85e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 3.20e-17 | 120 |
classical monocyte | 5.78e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.78e-17 | 42 |
leukocyte | 5.38e-15 | 136 |
hematopoietic oligopotent progenitor cell | 2.15e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.15e-12 | 161 |
hematopoietic stem cell | 8.42e-12 | 168 |
hematopoietic cell | 4.16e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.58e-28 | 76 |
bone element | 6.50e-26 | 82 |
skeletal element | 1.75e-23 | 90 |
immune system | 1.12e-22 | 93 |
hematopoietic system | 1.91e-21 | 98 |
blood island | 1.91e-21 | 98 |
skeletal system | 5.51e-21 | 100 |
hemolymphoid system | 2.58e-19 | 108 |
tricuspid valve | 5.38e-13 | 1 |
right atrium valve | 5.38e-13 | 1 |
outflow tract of atrium | 5.38e-13 | 1 |
outflow part of right atrium | 5.38e-13 | 1 |
right cardiac atrium | 5.38e-13 | 1 |
musculoskeletal system | 6.98e-12 | 167 |
lateral plate mesoderm | 4.87e-11 | 203 |
cardiac atrium | 3.93e-07 | 2 |
atrioventricular valve | 3.93e-07 | 2 |
future cardiac atrium | 3.93e-07 | 2 |