FF:11796-124C5: Difference between revisions

Latest revision as of 18:21, 4 June 2020

Name:	CD4+CD25+CD45RA+ naive regulatory T cells, donor2
Species:	Human (Homo sapiens)
Library ID:	CNhs13235
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	male
age	23
cell type	T cell
cell line	NA
company	NA
collaboration	Michael Rehli (University of Regensberg)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	21
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005102

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs13235		CAGE		DRX008061		DRR008933

Accession ID Hg19

Library id		BAM		CTSS
CNhs13235		DRZ000358		DRZ001743

Accession ID Hg38

Library id		BAM		CTSS
CNhs13235		DRZ011708		DRZ013093

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0.584
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.126
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.26
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.289
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.527
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.168
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0.289
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.748
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.432
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0.882
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.291
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.235
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0.168
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0.527
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.375
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0.882
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.168
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.23
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.49
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.289
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.168
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.855
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.55
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.882
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.635
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.595
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.509
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.882
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.886
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0.289
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13235

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	2.78023e-4
MA0003.1	MA0003.1	0.559
MA0004.1	MA0004.1	0.53
MA0006.1	MA0006.1	0.0515
MA0007.1	MA0007.1	0.977
MA0009.1	MA0009.1	0.287
MA0014.1	MA0014.1	0.372
MA0017.1	MA0017.1	0.583
MA0018.2	MA0018.2	5.8688e-9
MA0019.1	MA0019.1	0.68
MA0024.1	MA0024.1	0.659
MA0025.1	MA0025.1	0.203
MA0027.1	MA0027.1	0.34
MA0028.1	MA0028.1	6.4926e-7
MA0029.1	MA0029.1	0.568
MA0030.1	MA0030.1	0.00335
MA0031.1	MA0031.1	2.13902e-5
MA0035.2	MA0035.2	0.151
MA0038.1	MA0038.1	0.31
MA0039.2	MA0039.2	0.821
MA0040.1	MA0040.1	0.996
MA0041.1	MA0041.1	0.419
MA0042.1	MA0042.1	0.878
MA0043.1	MA0043.1	0.0042
MA0046.1	MA0046.1	0.558
MA0047.2	MA0047.2	0.0638
MA0048.1	MA0048.1	0.824
MA0050.1	MA0050.1	1.77361e-4
MA0051.1	MA0051.1	0.0262
MA0052.1	MA0052.1	0.028
MA0055.1	MA0055.1	0.264
MA0057.1	MA0057.1	0.544
MA0058.1	MA0058.1	0.459
MA0059.1	MA0059.1	0.412
MA0060.1	MA0060.1	0.689
MA0061.1	MA0061.1	0.0817
MA0062.2	MA0062.2	3.30555e-19
MA0065.2	MA0065.2	0.193
MA0066.1	MA0066.1	0.417
MA0067.1	MA0067.1	0.0187
MA0068.1	MA0068.1	0.826
MA0069.1	MA0069.1	0.802
MA0070.1	MA0070.1	0.819
MA0071.1	MA0071.1	0.864
MA0072.1	MA0072.1	0.317
MA0073.1	MA0073.1	0.977
MA0074.1	MA0074.1	0.173
MA0076.1	MA0076.1	3.15179e-10
MA0077.1	MA0077.1	0.0122
MA0078.1	MA0078.1	0.9
MA0079.2	MA0079.2	0.372
MA0080.2	MA0080.2	1.71574e-9
MA0081.1	MA0081.1	0.00893
MA0083.1	MA0083.1	0.0232
MA0084.1	MA0084.1	0.227
MA0087.1	MA0087.1	0.813
MA0088.1	MA0088.1	0.239
MA0090.1	MA0090.1	6.68858e-4
MA0091.1	MA0091.1	0.55
MA0092.1	MA0092.1	0.904
MA0093.1	MA0093.1	0.6
MA0099.2	MA0099.2	4.44753e-5
MA0100.1	MA0100.1	0.575
MA0101.1	MA0101.1	0.969
MA0102.2	MA0102.2	0.404
MA0103.1	MA0103.1	0.155
MA0104.2	MA0104.2	0.0573
MA0105.1	MA0105.1	0.00152
MA0106.1	MA0106.1	0.228
MA0107.1	MA0107.1	0.754
MA0108.2	MA0108.2	1.47548e-6
MA0111.1	MA0111.1	0.386
MA0112.2	MA0112.2	0.799
MA0113.1	MA0113.1	0.863
MA0114.1	MA0114.1	0.658
MA0115.1	MA0115.1	0.857
MA0116.1	MA0116.1	0.00622
MA0117.1	MA0117.1	0.0608
MA0119.1	MA0119.1	0.423
MA0122.1	MA0122.1	0.41
MA0124.1	MA0124.1	0.465
MA0125.1	MA0125.1	0.105
MA0131.1	MA0131.1	0.0614
MA0135.1	MA0135.1	0.219
MA0136.1	MA0136.1	3.33608e-21
MA0137.2	MA0137.2	0.684
MA0138.2	MA0138.2	0.321
MA0139.1	MA0139.1	0.0949
MA0140.1	MA0140.1	0.172
MA0141.1	MA0141.1	0.48
MA0142.1	MA0142.1	0.138
MA0143.1	MA0143.1	0.215
MA0144.1	MA0144.1	0.69
MA0145.1	MA0145.1	0.0549
MA0146.1	MA0146.1	0.602
MA0147.1	MA0147.1	0.0619
MA0148.1	MA0148.1	0.196
MA0149.1	MA0149.1	0.151
MA0150.1	MA0150.1	0.311
MA0152.1	MA0152.1	0.0179
MA0153.1	MA0153.1	0.356
MA0154.1	MA0154.1	0.378
MA0155.1	MA0155.1	0.329
MA0156.1	MA0156.1	8.1356e-19
MA0157.1	MA0157.1	8.34363e-5
MA0159.1	MA0159.1	0.44
MA0160.1	MA0160.1	0.944
MA0162.1	MA0162.1	0.432
MA0163.1	MA0163.1	3.18303e-6
MA0164.1	MA0164.1	0.639
MA0258.1	MA0258.1	0.703
MA0259.1	MA0259.1	0.0898

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13235

Novel motif	Logo	P-value
1	1	0.466
10	10	0.0143
100	100	0.472
101	101	0.226
102	102	0.918
103	103	0.624
104	104	0.815
105	105	0.289
106	106	0.962
107	107	0.00273
108	108	0.503
109	109	0.185
11	11	0.28
110	110	0.802
111	111	0.828
112	112	0.952
113	113	0.609
114	114	0.595
115	115	0.194
116	116	0.159
117	117	0.00229
118	118	0.229
119	119	0.303
12	12	0.726
120	120	0.939
121	121	0.862
122	122	0.77
123	123	0.00466
124	124	0.593
125	125	0.249
126	126	0.758
127	127	0.768
128	128	0.291
129	129	0.936
13	13	0.455
130	130	0.524
131	131	0.501
132	132	0.367
133	133	0.652
134	134	0.652
135	135	0.945
136	136	0.919
137	137	0.115
138	138	0.482
139	139	0.0596
14	14	0.67
140	140	0.184
141	141	0.623
142	142	0.217
143	143	0.0123
144	144	0.807
145	145	0.656
146	146	0.589
147	147	0.0184
148	148	0.343
149	149	0.406
15	15	0.223
150	150	0.911
151	151	0.657
152	152	0.235
153	153	0.68
154	154	0.466
155	155	0.0127
156	156	0.895
157	157	0.47
158	158	0.00352
159	159	0.463
16	16	0.512
160	160	0.455
161	161	0.99
162	162	0.0374
163	163	0.36
164	164	0.121
165	165	0.826
166	166	0.245
167	167	0.139
168	168	0.754
169	169	0.309
17	17	0.6
18	18	0.708
19	19	0.0923
2	2	0.351
20	20	0.221
21	21	0.699
22	22	0.451
23	23	0.385
24	24	0.573
25	25	0.0833
26	26	0.754
27	27	0.755
28	28	0.594
29	29	0.0199
3	3	0.273
30	30	0.127
31	31	0.631
32	32	0.0441
33	33	0.138
34	34	0.344
35	35	0.302
36	36	0.0187
37	37	0.306
38	38	0.934
39	39	0.261
4	4	0.964
40	40	0.47
41	41	0.107
42	42	0.184
43	43	0.513
44	44	0.983
45	45	0.209
46	46	0.628
47	47	0.225
48	48	0.451
49	49	0.195
5	5	0.483
50	50	0.537
51	51	0.957
52	52	0.256
53	53	0.544
54	54	0.932
55	55	0.767
56	56	0.914
57	57	0.75
58	58	0.113
59	59	0.668
6	6	0.929
60	60	0.76
61	61	0.0748
62	62	0.144
63	63	0.981
64	64	0.567
65	65	0.788
66	66	0.846
67	67	0.91
68	68	0.436
69	69	0.549
7	7	0.351
70	70	0.154
71	71	0.115
72	72	0.15
73	73	0.822
74	74	0.54
75	75	0.0065
76	76	0.0649
77	77	0.0223
78	78	0.301
79	79	0.475
8	8	0.485
80	80	0.0118
81	81	0.561
82	82	0.253
83	83	0.771
84	84	0.555
85	85	0.332
86	86	0.206
87	87	0.573
88	88	0.997
89	89	0.0734
9	9	0.979
90	90	0.151
91	91	0.856
92	92	0.967
93	93	0.74
94	94	0.269
95	95	0.00981
96	96	0.619
97	97	0.273
98	98	0.28
99	99	1.07317e-4

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13235

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0000210 human sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
+|DRA_sample_Accession=CAGE@SAMD00005102
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000084,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000624,CL:0000723,CL:0000738,CL:0000789,CL:0000790,CL:0000791,CL:0000792,CL:0000813,CL:0000815,CL:0000827,CL:0000837,CL:0000838,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371,CL:0002419,CL:0002420,CL:0002678
+|accession_numbers=CAGE;DRX008061;DRR008933;DRZ000358;DRZ001743;DRZ011708;DRZ013093
+|ancestors_in_anatomy_facet=
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001
 |comment=Changed from previous label. TODO: full classification
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chrX:49121165..49121179,-!p1@FOXP3!2.30!196.48!FOXP3;;chr3:71355163..71355209,-!p5@FOXP1!2.17!198.37!FOXP1;;chr3:63953435..63953499,+!p1@ATXN7!2.00!99.42!ATXN7;;chr5:133451294..133451310,+!p2@TCF7!1.89!76.70!TCF7;;chr4:109087445..109087463,-!p1@LEF1!1.85!69.60!LEF1;;chr3:71542615..71542644,-!p12@FOXP1!1.81!63.92!FOXP1;;chr19:54058073..54058088,+!p1@ZNF331!1.80!62.02!ZNF331;;chr4:109090075..109090095,-!p2@LEF1!1.77!57.76!LEF1;;chr19:16435625..16435682,+!p1@KLF2!1.72!1549.12!KLF2;;chr1:25256756..25256774,-!p1@RUNX3!1.72!94.22!RUNX3;;chr19:19779619..19779670,+!p1@ZNF101!1.71!136.35!ZNF101;;chr19:54041669..54041697,+!p2@ZNF331!1.70!49.24!ZNF331;;chr7:50343634..50343717,+!p2@IKZF1!1.69!47.82!IKZF1;;chrX:106960285..106960299,-!p1@TSC22D3!1.66!1127.28!TSC22D3;;chrY:21906594..21906622,-!p1@KDM5D!1.66!44.98!KDM5D;;chr2:231090433..231090469,+!p1@SP140!1.63!41.66!SP140;;chr5:133450365..133450444,+!p1@TCF7!1.60!171.39!TCF7;;chr6:91006518..91006570,-!p1@BACH2!1.57!81.43!BACH2;;chr10:35484053..35484076,+!p1@CREM!1.56!84.75!CREM;;chr2:157189180..157189290,-!p1@NR4A2!1.53!164.29!NR4A2;;chr10:35416142..35416169,+!p3@CREM!1.52!82.38!CREM;;chr17:38497662..38497713,+!p4@RARA!1.51!36.46!RARA;;chr6:391743..391759,+!p1@IRF4!1.51!31.25!IRF4;;chr2:97202991..97203043,+!p3@ARID5A!1.51!31.25!ARID5A;;chr4:109089901..109089930,-!p3@LEF1!1.47!28.41!LEF1;;chr5:133451347..133451358,+!p3@TCF7!1.45!26.99!TCF7;;chr3:18486354..18486377,-!p2@SATB1!1.44!32.67!SATB1;;chr17:37934365..37934387,-!p2@IKZF3!1.44!26.51!IKZF3;;chr9:3525727..3525828,-!p2@RFX3!1.43!64.39!RFX3;;chr3:71542651..71542683,-!p22@FOXP1!1.38!22.73!FOXP1;;chr7:50343895..50343936,+!p5@IKZF1!1.38!22.73!IKZF1;;chr2:100759010..100759035,-!p1@AFF3!1.37!22.25!AFF3;;chr4:109089573..109089585,-!p8@LEF1!1.37!22.25!LEF1;;chr14:64971288..64971316,-!p2@ZBTB25!1.36!65.81!ZBTB25;;chr16:3313791..3313834,+!p2@ZNF263!1.35!46.40!ZNF263;;chr14:64970670..64970712,-!p3@ZBTB25!1.35!45.45!ZBTB25;;chr8:81397846..81397860,+!p3@ZBTB10!1.35!26.99!ZBTB10;;chr2:100759037..100759058,-!p2@AFF3!1.35!21.31!AFF3;;chr3:71542684..71542720,-!p18@FOXP1!1.35!21.31!FOXP1;;chr19:12902289..12902307,+!p1@JUNB!1.34!4616.12!JUNB;;chr6:91006575..91006602,-!p2@BACH2!1.32!29.35!BACH2;;chr3:71353892..71353928,-!p31@FOXP1!1.31!19.41!FOXP1;;chr11:128392273..128392308,-!p2@ETS1!1.30!79.07!ETS1;;chr3:18480217..18480239,-!p3@SATB1!1.30!18.94!SATB1;;chr10:35416223..35416234,+!p12@CREM!1.28!17.99!CREM;;chr19:54041645..54041661,+!p5@ZNF331!1.27!17.52!ZNF331;;chr7:50344251..50344288,+!p3@IKZF1!1.26!17.04!IKZF1;;chr21:36421535..36421610,-!p2@RUNX1!1.24!57.29!RUNX1;;chr9:114287433..114287513,+!p1@ZNF483!1.23!40.72!ZNF483;;chr6:91006503..91006517,-!p3@BACH2!1.23!16.10!BACH2;;chr4:38665769..38665801,+!p2@KLF3!1.22!137.77!KLF3;;chr9:117150254..117150271,-!p1@AKNA!1.22!42.14!AKNA;;chr2:214017168..214017189,-!p8@IKZF2!1.22!15.62!IKZF2;;chr15:60884706..60884743,-!p1@RORA!1.21!78.59!RORA;;chr19:12444440..12444455,-!p1@ZNF563!1.21!26.04!ZNF563;;chr8:81397876..81397898,+!p5@ZBTB10!1.21!17.99!ZBTB10;;chr19:19779686..19779697,+!p3@ZNF101!1.20!17.04!ZNF101;;chr10:35416172..35416184,+!p13@CREM!1.20!14.68!CREM;;chr2:97202480..97202499,+!p1@ARID5A!1.19!143.93!ARID5A;;chr14:75988771..75988826,+!p1@BATF!1.18!18.94!BATF;;chr10:35485013..35485034,+!p15@CREM!1.18!14.20!CREM;;chr2:231090471..231090504,+!p2@SP140!1.17!13.73!SP140;;chr4:109088130..109088163,-!p13@LEF1!1.17!13.73!LEF1;;chr11:128392085..128392232,-!p1@ETS1!1.16!446.46!ETS1;;chr12:133707204..133707236,+!p1@ZNF10,p2@ZNF268!1.16!75.75!ZNF10;;chr1:45805693..45805718,+!p3@TOE1!1.15!27.93!TOE1;;chr19:19729477..19729542,-!p1@PBX4!1.14!27.46!PBX4;;chr6:106546808..106546833,+!p3@PRDM1!1.14!16.10!PRDM1;;chr3:71542747..71542766,-!p34@FOXP1!1.14!12.78!FOXP1;;chr4:109088089..109088101,-!p11@LEF1!1.14!12.78!LEF1;;chr13:41240717..41240735,-!p2@FOXO1!1.13!85.69!FOXO1;;chr19:45972701..45972774,+!p2@FOSB!1.13!17.04!FOSB;;chr13:41593425..41593480,-!p1@ELF1!1.12!78.12!ELF1;;chr2:214016254..214016282,-!p7@IKZF2!1.12!12.31!IKZF2;;chr4:109088940..109089037,-!p4@LEF1!1.11!11.84!LEF1;;chr2:192015750..192015793,-!p2@STAT4!1.10!15.62!STAT4;;chr20:56195474..56195506,-!p1@ZBP1!1.09!11.36!ZBP1;;chr8:81397820..81397836,+!p2@ZBTB10!1.08!13.73!ZBTB10;;chr14:99738138..99738163,-!p1@BCL11B!1.08!10.89!BCL11B;;chr20:50159198..50159299,-!p1@NFATC2!1.07!15.62!NFATC2;;chr12:72056800..72056834,+!p1@THAP2!1.07!14.68!THAP2;;chr2:208394817..208394834,+!p3@CREB1!1.06!43.08!CREB1;;chr3:18487057..18487105,-!p4@SATB1!1.06!10.42!SATB1;;chr19:54040550..54040594,+!p20@ZNF331!1.06!10.42!ZNF331;;chr17:56565257..56565283,-!p2@HSF5!1.04!9.94!HSF5;;chr3:71542827..71542838,-!p53@FOXP1!1.04!9.94!FOXP1;;chr6:12009042..12009092,+!p6@HIVEP1!1.03!12.78!HIVEP1;;chr13:74707894..74707947,-!p6@KLF12!1.03!10.89!KLF12;;chr7:99097863..99097936,-!p1@ZNF394!1.02!97.06!ZNF394;;chr8:60031619..60031676,-!p1@TOX!1.02!20.83!TOX;;chr8:123793988..123794016,+!p1@ZHX2!1.02!17.04!ZHX2;;chr4:109086403..109086421,-!p19@LEF1!1.02!9.47!LEF1;;chr3:39195075..39195088,-!p1@CSRNP1!1.01!58.71!CSRNP1;;chr3:23986824..23986848,+!p2@NR1D2!1.01!53.03!NR1D2;;chrX:101186981..101187030,-!p1@ZMAT1!1.01!30.30!ZMAT1;;chr19:19843900..19843928,-!p1@ZNF14!1.00!45.45!ZNF14;;chr19:16435523..16435619,+!p2@KLF2!1.00!12.78!KLF2;;chr13:41240737..41240787,-!p1@FOXO1!0.99!106.53!FOXO1;;chr19:38085768..38085821,+!p1@ZNF540!0.99!13.26!ZNF540;;chr2:192015701..192015743,-!p1@STAT4!0.99!12.31!STAT4;;chr9:20621927..20621996,-!p3@MLLT3!0.98!14.68!MLLT3;;chr2:214015343..214015366,-!p3@IKZF2!0.98!8.52!IKZF2;;chr3:63898321..63898396,+!p3@ATXN7!0.97!19.41!ATXN7;;chr10:8096772..8096787,+!p2@GATA3!0.97!9.94!GATA3;;chr10:35484090..35484104,+!p6@CREM!0.96!8.05!CREM;;chr3:18480173..18480189,-!p6@SATB1!0.96!8.05!SATB1;;chr4:38665810..38665827,+!p1@KLF3!0.95!119.78!KLF3;;chr9:102584262..102584276,+!p1@NR4A3!0.95!17.99!NR4A3;;chr19:49140609..49140643,-!p1@DBP!0.94!44.98!DBP;;chr14:65569101..65569119,-!p3@MAX!0.93!24.62!MAX;;chr5:142814241..142814278,-!p12@NR3C1!0.93!7.58!NR3C1;;chr19:12444399..12444415,-!p5@ZNF563!0.93!7.58!ZNF563;;chr19:38085739..38085762,+!p3@ZNF540!0.93!7.58!ZNF540;;chr4:109087906..109087928,-!p12@LEF1!0.93!7.58!LEF1;;chrY:2803415..2803468,+!p1@ZFY!0.93!7.58!ZFY;;chr2:157198916..157198978,-!p2@NR4A2!0.92!26.51!NR4A2;;chr9:20622444..20622468,-!p2@MLLT3!0.91!24.15!MLLT3;;chr19:52674696..52674758,-!p1@ZNF836!0.91!21.78!ZNF836;;chr15:60884747..60884774,-!p3@RORA!0.91!17.99!RORA;;chr17:46621311..46621332,-!p8@HOXB2!0.91!9.47!HOXB2;;chr10:35416125..35416138,+!p10@CREM!0.91!8.52!CREM;;chr19:16435423..16435484,+!p5@KLF2!0.91!7.10!KLF2;;chr9:20620829..20620848,-!p7@MLLT3!0.91!7.10!MLLT3;;chr4:109086281..109086319,-!p9@LEF1!0.91!7.10!LEF1;;chr5:131826457..131826514,-!p1@IRF1!0.90!285.96!IRF1;;chr5:172483347..172483407,+!p1@C5orf41!0.90!54.45!CREBRF;;chr9:73028814..73028895,-!p1@KLF9!0.89!70.07!KLF9;;chr2:208031542..208031595,-!p2@KLF7!0.89!49.71!KLF7;;chr18:77155922..77155939,+!p1@NFATC1!0.89!19.41!NFATC1;;chr12:72056773..72056796,+!p3@THAP2!0.89!9.00!THAP2;;chr3:101568349..101568365,+!p1@NFKBIZ!0.88!357.93!NFKBIZ;;chr19:20748574..20748599,-!p1@ZNF737!0.88!41.19!ZNF737;;chr9:73028332..73028385,-!p3@KLF9!0.88!23.67!KLF9;;chr7:108209925..108209941,-!p2@THAP5!0.88!6.63!THAP5;;chr7:50348268..50348366,+!p4@IKZF1!0.88!6.63!IKZF1;;chr19:54041603..54041615,+!p10@ZNF331!0.88!6.63!ZNF331;;chr20:56195525..56195556,-!p2@ZBP1!0.88!6.63!ZBP1;;chr3:71179699..71179744,-!p2@FOXP1!0.87!51.13!FOXP1;;chrX:106960180..106960197,-!p2@TSC22D3!0.87!25.57!TSC22D3;;chr19:23941680..23941704,-!p1@ZNF681!0.87!19.41!ZNF681;;chrX:106960221..106960236,-!p3@TSC22D3!0.87!18.46!TSC22D3;;chr2:214015111..214015179,-!p1@IKZF2!0.87!11.84!IKZF2;;chr16:88519743..88519754,+!p2@ZFPM1!0.87!7.10!ZFPM1;;chr19:18392422..18392440,-!p1@JUND!0.86!909.02!JUND;;chr7:21467642..21467671,+!p2@SP4!0.86!14.68!SP4;;chr10:104154246..104154347,+!p3@NFKB2!0.85!39.30!NFKB2;;chr13:74708029..74708077,-!p2@KLF12!0.85!18.46!KLF12;;chr10:135121763..135121783,+!p5@ZNF511!0.85!6.15!ZNF511;;chr17:38020516..38020544,-!p5@IKZF3!0.85!6.15!IKZF3;;chrY:21906623..21906637,-!p3@KDM5D!0.85!6.15!KDM5D;;chr2:113033164..113033219,+!p1@ZC3H6!0.84!53.03!ZC3H6;;chr11:128392309..128392350,-!p3@ETS1!0.84!14.68!ETS1;;chr12:57914286..57914304,-!p1@DDIT3!0.83!224.41!DDIT3;;chr19:45971246..45971265,+!p1@FOSB!0.83!115.99!FOSB;;chr7:21467674..21467727,+!p1@SP4!0.83!24.62!SP4;;chr19:12405606..12405629,-!p2@ZNF44!0.82!11.36!ZNF44;;chr17:38497715..38497734,+!p8@RARA!0.82!5.68!RARA;;chr19:38085978..38085996,-!p3@ZNF571!0.82!5.68!ZNF571;;chr19:54041574..54041589,+!p6@ZNF331!0.82!5.68!ZNF331;;chr11:128331703..128331717,-!p8@ETS1!0.82!5.68!ETS1;;chr2:231090344..231090361,-!p3@SP110!0.82!5.68!SP110;;chr2:61108650..61108687,+!p2@REL!0.81!28.88!REL;;chr18:77160282..77160343,+!p2@NFATC1!0.80!35.98!NFATC1;;chr6:12008986..12009016,+!p3@HIVEP1!0.80!17.52!HIVEP1;;chr2:148778973..148779035,+!p3@MBD5!0.80!14.68!MBD5;;chr17:36861675..36861697,+!p3@MLLT6!0.80!13.26!MLLT6;;chr9:102584241..102584261,+!p4@NR4A3!0.80!8.52!NR4A3;;chr14:69262947..69262986,-!p3@ZFP36L1!0.80!6.63!ZFP36L1;;chr19:21512202..21512225,-!p1@ZNF708!0.79!28.41!ZNF708;;chr19:23870007..23870022,-!p2@ZNF675!0.79!17.99!ZNF675;;chr12:133707021..133707071,-!p2@ZNF891!0.79!9.00!ZNF891;;chrX:106960249..106960260,-!p5@TSC22D3!0.79!8.52!TSC22D3;;chr17:37934280..37934299,-!p6@IKZF3!0.79!5.21!IKZF3;;chr17:46621146..46621180,-!p10@HOXB2!0.79!5.21!HOXB2;;chr7:148982396..148982408,+!p4@ZNF783!0.79!5.21!ZNF783;;chr7:50344289..50344323,+!p1@IKZF1!0.79!5.21!IKZF1;;chr4:109090054..109090073,-!p7@LEF1!0.79!5.21!LEF1;;chr19:19932513..19932569,-!p1@ZNF506!0.78!102.74!ZNF506;;chr11:67007548..67007610,+!p3@KDM2A!0.78!41.19!KDM2A;;chr6:143266297..143266356,-!p1@HIVEP2!0.78!26.04!HIVEP2;;chr19:47616992..47617011,-!p4@ZC3H4!0.78!11.36!ZC3H4;;chr11:128563948..128564003,+!p1@FLI1!0.77!64.86!FLI1;;chr19:52490043..52490113,-!p1@ZNF350!0.77!42.14!ZNF350;;chr9:3525867..3525902,-!p3@RFX3!0.77!18.46!RFX3;;chr1:149858461..149858479,+!p1@BOLA1!0.76!2058.55!BOLA1;;chr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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000624;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 41: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD4%252bCD25%252bCD45RA%252b%2520naive%2520regulatory%2520T%2520cells%252c%2520donor2.CNhs13235.11796-124C5.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD4%252bCD25%252bCD45RA%252b%2520naive%2520regulatory%2520T%2520cells%252c%2520donor2.CNhs13235.11796-124C5.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD4%252bCD25%252bCD45RA%252b%2520naive%2520regulatory%2520T%2520cells%252c%2520donor2.CNhs13235.11796-124C5.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD4%252bCD25%252bCD45RA%252b%2520naive%2520regulatory%2520T%2520cells%252c%2520donor2.CNhs13235.11796-124C5.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD4%252bCD25%252bCD45RA%252b%2520naive%2520regulatory%2520T%2520cells%252c%2520donor2.CNhs13235.11796-124C5.hg38.nobarcode.ctss.bed.gz
 |id=FF:11796-124C5
 |is_a=EFO:0002091;;FF:0000002;;FF:0000210
+|is_obsolete=
+|library_id=CNhs13235
+|library_id_phase_based=2:CNhs13235
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11796
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11796
 |name=CD4+CD25+CD45RA+ naive regulatory T cells, donor2
 |namespace=
@@ Line 42: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs13235,LSID1006,release012,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
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 |rna_box=124
 |rna_catalog_number=
@@ Line 57: / Line 78: @@
 |rna_weight_ug=0.738
 |sample_age=23
+|sample_category=primary cells
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 69: / Line 91: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.00282363052713e-229!GO:0043227;membrane-bound organelle;1.49496362074066e-205!GO:0043231;intracellular membrane-bound organelle;3.36983392064182e-205!GO:0043226;organelle;2.48698415814506e-190!GO:0043229;intracellular organelle;1.20200449799213e-189!GO:0005737;cytoplasm;1.85101901854762e-124!GO:0044422;organelle part;1.41385236267011e-115!GO:0044446;intracellular organelle part;6.96358485129042e-114!GO:0005634;nucleus;6.97855743935234e-113!GO:0044237;cellular metabolic process;2.21836275982266e-102!GO:0043170;macromolecule metabolic process;2.44126967006213e-102!GO:0044238;primary metabolic process;1.80877066268077e-96!GO:0032991;macromolecular complex;6.49984414950383e-96!GO:0030529;ribonucleoprotein complex;3.7267666057859e-93!GO:0044444;cytoplasmic part;3.72835972426789e-87!GO:0003723;RNA binding;1.01248636050754e-82!GO:0044428;nuclear part;1.95756105850695e-80!GO:0043283;biopolymer metabolic process;8.35107936178074e-73!GO:0043233;organelle lumen;1.10566167887654e-69!GO:0031974;membrane-enclosed lumen;1.10566167887654e-69!GO:0010467;gene expression;3.22585210520999e-68!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.67492296714709e-63!GO:0005739;mitochondrion;1.00402206495925e-59!GO:0006396;RNA processing;1.00402206495925e-59!GO:0006412;translation;3.04443248189976e-52!GO:0005840;ribosome;4.4196137830928e-52!GO:0003676;nucleic acid binding;3.65179693560358e-50!GO:0031981;nuclear lumen;4.71814497237521e-49!GO:0016071;mRNA metabolic process;6.29420107080493e-48!GO:0019538;protein metabolic process;2.64248373176563e-45!GO:0043234;protein complex;3.01332165897887e-45!GO:0003735;structural constituent of ribosome;3.54849553235206e-45!GO:0044267;cellular protein metabolic process;5.2788757175332e-44!GO:0044260;cellular macromolecule metabolic process;3.6567852303287e-43!GO:0044429;mitochondrial part;1.05040906484369e-42!GO:0008380;RNA splicing;2.72102251920441e-42!GO:0033036;macromolecule localization;5.74828193576789e-42!GO:0006397;mRNA processing;5.6278173667686e-41!GO:0005515;protein binding;1.14771967174526e-40!GO:0033279;ribosomal subunit;1.90032991700186e-40!GO:0015031;protein transport;4.93956998784753e-40!GO:0009059;macromolecule biosynthetic process;1.36650032829556e-39!GO:0031967;organelle envelope;2.84682058776167e-39!GO:0016070;RNA metabolic process;5.8439605843557e-39!GO:0031975;envelope;5.94079056623013e-39!GO:0045184;establishment of protein localization;2.27658461327164e-38!GO:0008104;protein localization;3.75863496302021e-38!GO:0031090;organelle membrane;6.01275127950749e-37!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.1337439728119e-32!GO:0005681;spliceosome;3.66886735203939e-32!GO:0006259;DNA metabolic process;4.91829506776271e-32!GO:0005829;cytosol;8.76058080654875e-32!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.68278965694295e-31!GO:0044249;cellular biosynthetic process;8.87838698074515e-31!GO:0005654;nucleoplasm;2.84978337847508e-30!GO:0009058;biosynthetic process;5.47944877980597e-30!GO:0065003;macromolecular complex assembly;3.92450794482617e-29!GO:0046907;intracellular transport;1.05814334346979e-28!GO:0006886;intracellular protein transport;1.02516391616068e-27!GO:0044445;cytosolic part;1.8321522291167e-27!GO:0005740;mitochondrial envelope;3.96710829895995e-27!GO:0031966;mitochondrial membrane;2.64427949778539e-26!GO:0016043;cellular component organization and biogenesis;5.74997181750305e-26!GO:0022607;cellular component assembly;6.46493497072685e-26!GO:0006512;ubiquitin cycle;7.25486117347429e-26!GO:0019866;organelle inner membrane;1.52599494486607e-25!GO:0044451;nucleoplasm part;2.51097428258696e-24!GO:0005743;mitochondrial inner membrane;1.25209777966953e-23!GO:0006996;organelle organization and biogenesis;2.45194813843278e-22!GO:0000166;nucleotide binding;6.58271018727364e-22!GO:0015935;small ribosomal subunit;1.59446336706121e-21!GO:0022618;protein-RNA complex assembly;1.19534414458311e-20!GO:0005730;nucleolus;3.07855256416945e-20!GO:0006119;oxidative phosphorylation;3.18518222106584e-20!GO:0044455;mitochondrial membrane part;3.64543506107733e-20!GO:0015934;large ribosomal subunit;5.00765086060647e-20!GO:0016874;ligase activity;3.3978045866358e-19!GO:0051641;cellular localization;3.80114990917169e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.76022802680453e-19!GO:0016462;pyrophosphatase activity;7.08343864483571e-19!GO:0051649;establishment of cellular localization;7.47351066077778e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;8.28274095250154e-19!GO:0017111;nucleoside-triphosphatase activity;1.47457853361594e-18!GO:0044265;cellular macromolecule catabolic process;1.65929781194999e-18!GO:0031980;mitochondrial lumen;2.52020808524827e-18!GO:0005759;mitochondrial matrix;2.52020808524827e-18!GO:0043228;non-membrane-bound organelle;1.07745707060888e-17!GO:0043232;intracellular non-membrane-bound organelle;1.07745707060888e-17!GO:0008135;translation factor activity, nucleic acid binding;1.27374710188604e-17!GO:0043412;biopolymer modification;1.38961893432013e-17!GO:0006325;establishment and/or maintenance of chromatin architecture;1.95233203165569e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;1.96459248732468e-17!GO:0019941;modification-dependent protein catabolic process;2.13608957677508e-17!GO:0043632;modification-dependent macromolecule catabolic process;2.13608957677508e-17!GO:0006511;ubiquitin-dependent protein catabolic process;2.70060978743828e-17!GO:0016604;nuclear body;3.28613404124243e-17!GO:0044257;cellular protein catabolic process;3.64237945451005e-17!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.54137586743106e-17!GO:0043285;biopolymer catabolic process;7.4731877158785e-17!GO:0006323;DNA packaging;9.58245920505794e-17!GO:0006974;response to DNA damage stimulus;1.56045669869782e-16!GO:0006605;protein targeting;1.9999705914522e-16!GO:0051276;chromosome organization and biogenesis;2.25665798643462e-16!GO:0005746;mitochondrial respiratory chain;3.32492887752334e-16!GO:0006457;protein folding;1.29667557263907e-15!GO:0008134;transcription factor binding;1.30385934539811e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.94890293671408e-15!GO:0016887;ATPase activity;3.79896522584354e-15!GO:0012501;programmed cell death;4.90220123486191e-15!GO:0006915;apoptosis;5.19010294077317e-15!GO:0042623;ATPase activity, coupled;5.32766194973356e-15!GO:0009057;macromolecule catabolic process;5.82944632480066e-15!GO:0006464;protein modification process;6.37188856180811e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;6.37188856180811e-15!GO:0000375;RNA splicing, via transesterification reactions;6.37188856180811e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.37188856180811e-15!GO:0006281;DNA repair;8.22322939846155e-15!GO:0016607;nuclear speck;1.43499847221514e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.8290925291003e-14!GO:0003954;NADH dehydrogenase activity;1.8290925291003e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.8290925291003e-14!GO:0008219;cell death;1.94724716087633e-14!GO:0016265;death;1.94724716087633e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.96642838369739e-14!GO:0006913;nucleocytoplasmic transport;2.16374710131743e-14!GO:0051169;nuclear transport;3.57587140860756e-14!GO:0000502;proteasome complex (sensu Eukaryota);3.68931477920605e-14!GO:0032553;ribonucleotide binding;4.53575803003169e-14!GO:0032555;purine ribonucleotide binding;4.53575803003169e-14!GO:0043687;post-translational protein modification;5.87063229135175e-14!GO:0017076;purine nucleotide binding;9.33213891279443e-14!GO:0003743;translation initiation factor activity;2.05638735555601e-13!GO:0042254;ribosome biogenesis and assembly;4.02627817713363e-13!GO:0006413;translational initiation;4.50699450467669e-13!GO:0004386;helicase activity;6.06605490009317e-13!GO:0042775;organelle ATP synthesis coupled electron transport;6.29780110968126e-13!GO:0042773;ATP synthesis coupled electron transport;6.29780110968126e-13!GO:0019222;regulation of metabolic process;6.62998850524821e-13!GO:0030163;protein catabolic process;6.84925120426307e-13!GO:0005761;mitochondrial ribosome;7.68502737761143e-13!GO:0000313;organellar ribosome;7.68502737761143e-13!GO:0005635;nuclear envelope;8.41192346747728e-13!GO:0031965;nuclear membrane;9.16547759791524e-13!GO:0050794;regulation of cellular process;9.35634722700596e-13!GO:0012505;endomembrane system;1.3431562862819e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.37293906914282e-12!GO:0045271;respiratory chain complex I;1.37293906914282e-12!GO:0005747;mitochondrial respiratory chain complex I;1.37293906914282e-12!GO:0005694;chromosome;1.80714420303861e-12!GO:0065004;protein-DNA complex assembly;1.96103395456501e-12!GO:0005524;ATP binding;2.1766885983965e-12!GO:0044453;nuclear membrane part;2.92974293661914e-12!GO:0044248;cellular catabolic process;3.91652258132347e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.02844744120569e-12!GO:0032559;adenyl ribonucleotide binding;6.53973847077239e-12!GO:0006333;chromatin assembly or disassembly;8.76799583679105e-12!GO:0008026;ATP-dependent helicase activity;1.20701720706233e-11!GO:0051082;unfolded protein binding;1.3482113070693e-11!GO:0008270;zinc ion binding;1.49118113288742e-11!GO:0030554;adenyl nucleotide binding;1.69930351884215e-11!GO:0016568;chromatin modification;1.797905456953e-11!GO:0006446;regulation of translational initiation;2.47839449482636e-11!GO:0006403;RNA localization;2.73847838617848e-11!GO:0050657;nucleic acid transport;2.79282444851205e-11!GO:0051236;establishment of RNA localization;2.79282444851205e-11!GO:0050658;RNA transport;2.79282444851205e-11!GO:0031323;regulation of cellular metabolic process;3.28369917066018e-11!GO:0007049;cell cycle;3.53381990790219e-11!GO:0005643;nuclear pore;6.27884215141743e-11!GO:0006350;transcription;8.17065865956967e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.48120131776889e-10!GO:0008639;small protein conjugating enzyme activity;1.488424103796e-10!GO:0044427;chromosomal part;1.99918988306379e-10!GO:0004842;ubiquitin-protein ligase activity;2.21330700464211e-10!GO:0019787;small conjugating protein ligase activity;2.42321509390591e-10!GO:0003712;transcription cofactor activity;2.71897908966004e-10!GO:0006399;tRNA metabolic process;2.81072551268148e-10!GO:0051186;cofactor metabolic process;2.88421809823413e-10!GO:0017038;protein import;2.88553825951811e-10!GO:0009719;response to endogenous stimulus;3.26728753908748e-10!GO:0042981;regulation of apoptosis;3.71301849258832e-10!GO:0048193;Golgi vesicle transport;4.08033426937054e-10!GO:0043067;regulation of programmed cell death;5.33231909762345e-10!GO:0016072;rRNA metabolic process;9.22052983590652e-10!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.02417647442081e-09!GO:0006364;rRNA processing;1.47395138646523e-09!GO:0065002;intracellular protein transport across a membrane;1.53492506535724e-09!GO:0010468;regulation of gene expression;1.58785787314804e-09!GO:0051028;mRNA transport;2.03975629044917e-09!GO:0030532;small nuclear ribonucleoprotein complex;3.9165472510374e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.07286286733695e-09!GO:0046914;transition metal ion binding;4.09006541363779e-09!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.2265037977675e-09!GO:0000785;chromatin;5.12876273827145e-09!GO:0043566;structure-specific DNA binding;5.27474544263127e-09!GO:0006334;nucleosome assembly;5.72050270524369e-09!GO:0046930;pore complex;6.17897658194479e-09!GO:0048770;pigment granule;1.2415806824522e-08!GO:0042470;melanosome;1.2415806824522e-08!GO:0031497;chromatin assembly;1.32059387863391e-08!GO:0009259;ribonucleotide metabolic process;1.55269706447468e-08!GO:0032774;RNA biosynthetic process;1.57375539374028e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.63316497122144e-08!GO:0019829;cation-transporting ATPase activity;1.95156213495423e-08!GO:0006351;transcription, DNA-dependent;2.04711838035178e-08!GO:0009260;ribonucleotide biosynthetic process;2.55711584134507e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.87042312854741e-08!GO:0006732;coenzyme metabolic process;3.05443054978943e-08!GO:0016881;acid-amino acid ligase activity;3.45493799974875e-08!GO:0051726;regulation of cell cycle;3.8643702873234e-08!GO:0022402;cell cycle process;4.50058945989309e-08!GO:0006164;purine nucleotide biosynthetic process;4.79390677595997e-08!GO:0050789;regulation of biological process;5.43239725328157e-08!GO:0000074;regulation of progression through cell cycle;5.54696822232789e-08!GO:0003697;single-stranded DNA binding;6.69609247446892e-08!GO:0003713;transcription coactivator activity;7.32695269444605e-08!GO:0045449;regulation of transcription;7.79106840759251e-08!GO:0015078;hydrogen ion transmembrane transporter activity;8.21400846700031e-08!GO:0005839;proteasome core complex (sensu Eukaryota);8.96342623635162e-08!GO:0009152;purine ribonucleotide biosynthetic process;9.32832864568508e-08!GO:0006163;purine nucleotide metabolic process;1.002975247997e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.06419335651428e-07!GO:0000151;ubiquitin ligase complex;1.50102940141769e-07!GO:0009060;aerobic respiration;1.70663446887165e-07!GO:0008565;protein transporter activity;1.90059064118683e-07!GO:0009150;purine ribonucleotide metabolic process;2.10875606934822e-07!GO:0016779;nucleotidyltransferase activity;2.69348683027277e-07!GO:0004298;threonine endopeptidase activity;3.13948848637011e-07!GO:0000245;spliceosome assembly;3.87023314490134e-07!GO:0016787;hydrolase activity;4.67594489303317e-07!GO:0003677;DNA binding;4.9995446014086e-07!GO:0051168;nuclear export;5.08972745929534e-07!GO:0006793;phosphorus metabolic process;5.42093421942549e-07!GO:0006796;phosphate metabolic process;5.42093421942549e-07!GO:0015986;ATP synthesis coupled proton transport;6.23711780557025e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;6.23711780557025e-07!GO:0005794;Golgi apparatus;7.28487977147752e-07!GO:0005768;endosome;8.71675144519562e-07!GO:0032446;protein modification by small protein conjugation;8.71675144519562e-07!GO:0051170;nuclear import;9.30718704174655e-07!GO:0044432;endoplasmic reticulum part;9.31438631063895e-07!GO:0006355;regulation of transcription, DNA-dependent;1.01674263485575e-06!GO:0045333;cellular respiration;1.03160509720118e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.13775257980738e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.64698185916565e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.64698185916565e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.64698185916565e-06!GO:0006366;transcription from RNA polymerase II promoter;1.73058081512304e-06!GO:0051188;cofactor biosynthetic process;1.74891180680528e-06!GO:0006606;protein import into nucleus;1.91931175235028e-06!GO:0016567;protein ubiquitination;1.94665618179188e-06!GO:0003724;RNA helicase activity;1.95891550222024e-06!GO:0007005;mitochondrion organization and biogenesis;1.96507694674386e-06!GO:0045259;proton-transporting ATP synthase complex;2.1971483067188e-06!GO:0009142;nucleoside triphosphate biosynthetic process;2.23719514795385e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.23719514795385e-06!GO:0045786;negative regulation of progression through cell cycle;2.31495047345331e-06!GO:0009055;electron carrier activity;2.50927215575932e-06!GO:0006754;ATP biosynthetic process;2.52747124742803e-06!GO:0006753;nucleoside phosphate metabolic process;2.52747124742803e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.8869270285923e-06!GO:0009199;ribonucleoside triphosphate metabolic process;3.16118855381157e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.28508846811959e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.28508846811959e-06!GO:0043038;amino acid activation;3.28508846811959e-06!GO:0006418;tRNA aminoacylation for protein translation;3.28508846811959e-06!GO:0043039;tRNA aminoacylation;3.28508846811959e-06!GO:0016310;phosphorylation;3.6569674256589e-06!GO:0009141;nucleoside triphosphate metabolic process;3.67482918526534e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.86691547321454e-06!GO:0016469;proton-transporting two-sector ATPase complex;3.87763906957978e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;3.97415698027953e-06!GO:0015399;primary active transmembrane transporter activity;3.97415698027953e-06!GO:0006260;DNA replication;4.19613906155461e-06!GO:0016563;transcription activator activity;4.2494009969891e-06!GO:0016564;transcription repressor activity;4.43438438841675e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.54330503502082e-06!GO:0009144;purine nucleoside triphosphate metabolic process;4.54330503502082e-06!GO:0016740;transferase activity;4.68795612109593e-06!GO:0006888;ER to Golgi vesicle-mediated transport;5.02306758515874e-06!GO:0046034;ATP metabolic process;5.31161021192503e-06!GO:0005783;endoplasmic reticulum;5.36030555066588e-06!GO:0009056;catabolic process;5.88642578466801e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.92308904602536e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;7.55305112589771e-06!GO:0006916;anti-apoptosis;1.07346196548656e-05!GO:0005789;endoplasmic reticulum membrane;1.12182792897249e-05!GO:0051246;regulation of protein metabolic process;1.2739466810812e-05!GO:0031324;negative regulation of cellular metabolic process;1.27647230425318e-05!GO:0048523;negative regulation of cellular process;1.3903237669973e-05!GO:0043069;negative regulation of programmed cell death;1.43336710863084e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.4976509648342e-05!GO:0006099;tricarboxylic acid cycle;1.60215698799471e-05!GO:0046356;acetyl-CoA catabolic process;1.60215698799471e-05!GO:0016192;vesicle-mediated transport;1.64868536554875e-05!GO:0009108;coenzyme biosynthetic process;1.76749469374307e-05!GO:0043066;negative regulation of apoptosis;1.97127860957017e-05!GO:0006084;acetyl-CoA metabolic process;2.42171697203918e-05!GO:0006401;RNA catabolic process;2.66478270807244e-05!GO:0006613;cotranslational protein targeting to membrane;2.94682637960606e-05!GO:0000786;nucleosome;3.24876250311862e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.2945841468654e-05!GO:0016363;nuclear matrix;3.42576205157179e-05!GO:0008168;methyltransferase activity;3.76794859558547e-05!GO:0016741;transferase activity, transferring one-carbon groups;3.92374554146217e-05!GO:0008186;RNA-dependent ATPase activity;4.45040428480491e-05!GO:0019899;enzyme binding;4.70316780238743e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.13753376203993e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.23110403831801e-05!GO:0007243;protein kinase cascade;5.31132080175813e-05!GO:0008033;tRNA processing;5.58710943402836e-05!GO:0005813;centrosome;6.75863868837898e-05!GO:0043492;ATPase activity, coupled to movement of substances;6.78869611018528e-05!GO:0005762;mitochondrial large ribosomal subunit;6.91886438009118e-05!GO:0000315;organellar large ribosomal subunit;6.91886438009118e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;7.20235528295269e-05!GO:0006402;mRNA catabolic process;8.41984870863841e-05!GO:0005793;ER-Golgi intermediate compartment;9.10406438713324e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;9.26208336858238e-05!GO:0009109;coenzyme catabolic process;9.5427533943495e-05!GO:0065009;regulation of a molecular function;9.75774443909858e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000111336371281797!GO:0006752;group transfer coenzyme metabolic process;0.000115988856538158!GO:0009892;negative regulation of metabolic process;0.000116735242147197!GO:0003690;double-stranded DNA binding;0.000121695073757986!GO:0006261;DNA-dependent DNA replication;0.000125396555192426!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000128328602327393!GO:0043623;cellular protein complex assembly;0.000130260779155974!GO:0006461;protein complex assembly;0.000130824413197036!GO:0030120;vesicle coat;0.000131974165031129!GO:0030662;coated vesicle membrane;0.000131974165031129!GO:0065007;biological regulation;0.000140095029179244!GO:0004004;ATP-dependent RNA helicase activity;0.000142512418306192!GO:0016481;negative regulation of transcription;0.0001463216547663!GO:0008654;phospholipid biosynthetic process;0.000160133890154361!GO:0003899;DNA-directed RNA polymerase activity;0.000160133890154361!GO:0005769;early endosome;0.000176067192527138!GO:0030384;phosphoinositide metabolic process;0.000185118356892288!GO:0008234;cysteine-type peptidase activity;0.000189999872914516!GO:0048519;negative regulation of biological process;0.000194851394822692!GO:0005770;late endosome;0.000203904499450201!GO:0000314;organellar small ribosomal subunit;0.000206498619341291!GO:0005763;mitochondrial small ribosomal subunit;0.000206498619341291!GO:0006310;DNA recombination;0.000224146576747413!GO:0005815;microtubule organizing center;0.000224647346719731!GO:0003729;mRNA binding;0.000243763688471955!GO:0006917;induction of apoptosis;0.000256483133523513!GO:0043021;ribonucleoprotein binding;0.000257135451049476!GO:0006612;protein targeting to membrane;0.000261165865239886!GO:0046489;phosphoinositide biosynthetic process;0.000266674586017448!GO:0048475;coated membrane;0.000324911502676862!GO:0030117;membrane coat;0.000324911502676862!GO:0051187;cofactor catabolic process;0.00033244529419516!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000347224014941317!GO:0012502;induction of programmed cell death;0.000352008665745858!GO:0043681;protein import into mitochondrion;0.000361603422082848!GO:0006352;transcription initiation;0.000399620427930594!GO:0016251;general RNA polymerase II transcription factor activity;0.000417111290410859!GO:0044431;Golgi apparatus part;0.000426457833068885!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000475681357190927!GO:0006891;intra-Golgi vesicle-mediated transport;0.000478566427620737!GO:0043065;positive regulation of apoptosis;0.00048681821069819!GO:0008632;apoptotic program;0.000498381529089043!GO:0009117;nucleotide metabolic process;0.000505396817140013!GO:0005885;Arp2/3 protein complex;0.000578655916023324!GO:0006611;protein export from nucleus;0.000614671369596158!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000622464857668967!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000625195218258115!GO:0043068;positive regulation of programmed cell death;0.000655202251244838!GO:0044452;nucleolar part;0.000711311229247181!GO:0031072;heat shock protein binding;0.00071448942807872!GO:0006650;glycerophospholipid metabolic process;0.000717449241552769!GO:0005667;transcription factor complex;0.000861159996784172!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.000881419955053048!GO:0006383;transcription from RNA polymerase III promoter;0.000913928899253582!GO:0044440;endosomal part;0.000920741941587559!GO:0010008;endosome membrane;0.000920741941587559!GO:0004518;nuclease activity;0.000959836749520939!GO:0006818;hydrogen transport;0.000962327780836038!GO:0006405;RNA export from nucleus;0.000998714976227787!GO:0015992;proton transport;0.00101362805622672!GO:0006417;regulation of translation;0.0010160952192657!GO:0005684;U2-dependent spliceosome;0.00114185414070253!GO:0003924;GTPase activity;0.00115237529366236!GO:0019843;rRNA binding;0.00116021588385356!GO:0003714;transcription corepressor activity;0.00122536275894184!GO:0019867;outer membrane;0.00124797372743593!GO:0051087;chaperone binding;0.00130287805530079!GO:0046474;glycerophospholipid biosynthetic process;0.00130606680593369!GO:0000278;mitotic cell cycle;0.00131945180849622!GO:0051427;hormone receptor binding;0.00132848313744186!GO:0004674;protein serine/threonine kinase activity;0.00139325275343976!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00152260105385578!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00152260105385578!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00152260105385578!GO:0005525;GTP binding;0.00159039493963772!GO:0031968;organelle outer membrane;0.00166139274946489!GO:0032259;methylation;0.00173027716889979!GO:0060090;molecular adaptor activity;0.00178957062763217!GO:0022890;inorganic cation transmembrane transporter activity;0.00180696773567992!GO:0006414;translational elongation;0.00188186773136322!GO:0051539;4 iron, 4 sulfur cluster binding;0.0020513449124925!GO:0005741;mitochondrial outer membrane;0.00208801830521229!GO:0004527;exonuclease activity;0.00240555446087101!GO:0035257;nuclear hormone receptor binding;0.0024307560600182!GO:0019783;small conjugating protein-specific protease activity;0.00247486996854581!GO:0003746;translation elongation factor activity;0.00263811264967994!GO:0031326;regulation of cellular biosynthetic process;0.00274373341065473!GO:0008022;protein C-terminus binding;0.00282518657289737!GO:0007006;mitochondrial membrane organization and biogenesis;0.00291012013398144!GO:0051540;metal cluster binding;0.00295464464158974!GO:0051536;iron-sulfur cluster binding;0.00295464464158974!GO:0006289;nucleotide-excision repair;0.0029636739541699!GO:0006626;protein targeting to mitochondrion;0.0030357070754282!GO:0016197;endosome transport;0.00307981312422033!GO:0009615;response to virus;0.00321600705141959!GO:0048500;signal recognition particle;0.00343788109524778!GO:0015631;tubulin binding;0.00343871938384674!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00345301303424877!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00345301303424877!GO:0015002;heme-copper terminal oxidase activity;0.00345301303424877!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00345301303424877!GO:0004129;cytochrome-c oxidase activity;0.00345301303424877!GO:0006338;chromatin remodeling;0.00372618892234256!GO:0004843;ubiquitin-specific protease activity;0.00380306467189317!GO:0045892;negative regulation of transcription, DNA-dependent;0.00380349615609445!GO:0051252;regulation of RNA metabolic process;0.00392130796966345!GO:0005669;transcription factor TFIID complex;0.00392613998794828!GO:0031625;ubiquitin protein ligase binding;0.00408907364275229!GO:0006839;mitochondrial transport;0.00411607518542112!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00414036728260088!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00414036728260088!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0042529816452545!GO:0003678;DNA helicase activity;0.00428910653098221!GO:0004532;exoribonuclease activity;0.00459991308222225!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00459991308222225!GO:0007050;cell cycle arrest;0.00461399518211642!GO:0000139;Golgi membrane;0.00466793940903778!GO:0006506;GPI anchor biosynthetic process;0.00495733664196345!GO:0016584;nucleosome positioning;0.00499224786701221!GO:0043414;biopolymer methylation;0.00517527350439997!GO:0004221;ubiquitin thiolesterase activity;0.00519262462779572!GO:0006607;NLS-bearing substrate import into nucleus;0.00519655288795894!GO:0016272;prefoldin complex;0.00525484344310693!GO:0005773;vacuole;0.00535234614072386!GO:0006497;protein amino acid lipidation;0.00553625809015519!GO:0008017;microtubule binding;0.00568680798578641!GO:0016859;cis-trans isomerase activity;0.0057010581407821!GO:0005798;Golgi-associated vesicle;0.0057010581407821!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00579047768186428!GO:0046467;membrane lipid biosynthetic process;0.00579047768186428!GO:0043488;regulation of mRNA stability;0.00579047768186428!GO:0043487;regulation of RNA stability;0.00579047768186428!GO:0008312;7S RNA binding;0.00579047768186428!GO:0006505;GPI anchor metabolic process;0.00589213690721004!GO:0009165;nucleotide biosynthetic process;0.00615408228512174!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00645056633283906!GO:0048487;beta-tubulin binding;0.00693459043201577!GO:0003684;damaged DNA binding;0.0070091859313689!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00711937836707587!GO:0045047;protein targeting to ER;0.00711937836707587!GO:0005657;replication fork;0.00713327565410281!GO:0051789;response to protein stimulus;0.00799197209333136!GO:0006986;response to unfolded protein;0.00799197209333136!GO:0005637;nuclear inner membrane;0.0081605032283867!GO:0048471;perinuclear region of cytoplasm;0.00820732170845831!GO:0016790;thiolester hydrolase activity;0.00835339265252024!GO:0008408;3'-5' exonuclease activity;0.00835339265252024!GO:0006302;double-strand break repair;0.00844031782206203!GO:0030880;RNA polymerase complex;0.0087611499465333!GO:0009889;regulation of biosynthetic process;0.00890175673970404!GO:0050811;GABA receptor binding;0.00931837143365938!GO:0015980;energy derivation by oxidation of organic compounds;0.00939242305983316!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00941325742756303!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00947482202509976!GO:0006376;mRNA splice site selection;0.00960311679176316!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00960311679176316!GO:0003711;transcription elongation regulator activity;0.00973905186606159!GO:0007265;Ras protein signal transduction;0.0103067321688274!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0103836805382096!GO:0000323;lytic vacuole;0.01038665362614!GO:0005764;lysosome;0.01038665362614!GO:0030518;steroid hormone receptor signaling pathway;0.0104579653787842!GO:0000178;exosome (RNase complex);0.0105604914984744!GO:0009116;nucleoside metabolic process;0.0106990346067643!GO:0000049;tRNA binding;0.0107262778787042!GO:0007242;intracellular signaling cascade;0.0110322970415335!GO:0051301;cell division;0.0110935374561584!GO:0051090;regulation of transcription factor activity;0.0113589036559052!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0113617843724851!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.011371406285538!GO:0008624;induction of apoptosis by extracellular signals;0.0114196145976326!GO:0032561;guanyl ribonucleotide binding;0.0114763150758883!GO:0019001;guanyl nucleotide binding;0.0114763150758883!GO:0051059;NF-kappaB binding;0.011798164153842!GO:0033116;ER-Golgi intermediate compartment membrane;0.0123668060500173!GO:0003682;chromatin binding;0.0123906861925951!GO:0000287;magnesium ion binding;0.0124708757238982!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0128552855324641!GO:0030258;lipid modification;0.0128599455947217!GO:0051052;regulation of DNA metabolic process;0.0131461947541231!GO:0042101;T cell receptor complex;0.0133402560307942!GO:0043022;ribosome binding;0.0134059667913114!GO:0042110;T cell activation;0.0134376792440878!GO:0050852;T cell receptor signaling pathway;0.0136783056046053!GO:0005774;vacuolar membrane;0.0139857908047809!GO:0016605;PML body;0.0139904176462473!GO:0042802;identical protein binding;0.0140026972389405!GO:0008094;DNA-dependent ATPase activity;0.0140623145011169!GO:0043621;protein self-association;0.0141544667960905!GO:0001667;ameboidal cell migration;0.0142885880500022!GO:0032027;myosin light chain binding;0.0142885880500022!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0145773791049599!GO:0000428;DNA-directed RNA polymerase complex;0.0145773791049599!GO:0008276;protein methyltransferase activity;0.0148053255671602!GO:0022415;viral reproductive process;0.0150993900087789!GO:0042158;lipoprotein biosynthetic process;0.0151159319193082!GO:0048002;antigen processing and presentation of peptide antigen;0.0152739735987432!GO:0005869;dynactin complex;0.0153375677706132!GO:0006914;autophagy;0.0155192205484198!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0156107360214011!GO:0005048;signal sequence binding;0.0160248190894619!GO:0046966;thyroid hormone receptor binding;0.0160916495052714!GO:0006091;generation of precursor metabolites and energy;0.0160916495052714!GO:0032508;DNA duplex unwinding;0.0168559824565895!GO:0032392;DNA geometric change;0.0168559824565895!GO:0016853;isomerase activity;0.0173651090257579!GO:0040029;regulation of gene expression, epigenetic;0.017754563049953!GO:0032981;mitochondrial respiratory chain complex I assembly;0.017754563049953!GO:0010257;NADH dehydrogenase complex assembly;0.017754563049953!GO:0033108;mitochondrial respiratory chain complex assembly;0.017754563049953!GO:0032200;telomere organization and biogenesis;0.018115752623561!GO:0000723;telomere maintenance;0.018115752623561!GO:0030521;androgen receptor signaling pathway;0.0181905887623584!GO:0000738;DNA catabolic process, exonucleolytic;0.0187103851894734!GO:0008097;5S rRNA binding;0.0197170492499025!GO:0022403;cell cycle phase;0.0206970538086459!GO:0050790;regulation of catalytic activity;0.021262718522902!GO:0007004;telomere maintenance via telomerase;0.0214433333291702!GO:0003725;double-stranded RNA binding;0.0219248470809468!GO:0008287;protein serine/threonine phosphatase complex;0.0220236087890153!GO:0031902;late endosome membrane;0.0220236087890153!GO:0019901;protein kinase binding;0.0223425372337348!GO:0005070;SH3/SH2 adaptor activity;0.0225821404005025!GO:0031461;cullin-RING ubiquitin ligase complex;0.0229491514539928!GO:0006595;polyamine metabolic process;0.0230459837898816!GO:0047485;protein N-terminus binding;0.0232259309907656!GO:0051920;peroxiredoxin activity;0.0235518968206558!GO:0006919;caspase activation;0.0237168015474543!GO:0030522;intracellular receptor-mediated signaling pathway;0.0238760485862415!GO:0051251;positive regulation of lymphocyte activation;0.023885375448531!GO:0030137;COPI-coated vesicle;0.0240761047874684!GO:0000119;mediator complex;0.0240761047874684!GO:0007034;vacuolar transport;0.0242069070666232!GO:0044437;vacuolar part;0.0247619720632803!GO:0000175;3'-5'-exoribonuclease activity;0.025057832590497!GO:0045947;negative regulation of translational initiation;0.0251041033406955!GO:0051092;activation of NF-kappaB transcription factor;0.0251836078971395!GO:0007264;small GTPase mediated signal transduction;0.0252180396000465!GO:0000090;mitotic anaphase;0.0253210858984907!GO:0051322;anaphase;0.0253210858984907!GO:0031647;regulation of protein stability;0.0255184734155858!GO:0004197;cysteine-type endopeptidase activity;0.0256835322884855!GO:0000209;protein polyubiquitination;0.0263550159521183!GO:0008047;enzyme activator activity;0.0270548804539236!GO:0009112;nucleobase metabolic process;0.0271279915880267!GO:0051098;regulation of binding;0.0272796207734805!GO:0016585;chromatin remodeling complex;0.027700929619043!GO:0008180;signalosome;0.0277082364524111!GO:0015630;microtubule cytoskeleton;0.0277082364524111!GO:0030663;COPI coated vesicle membrane;0.027801880056311!GO:0030126;COPI vesicle coat;0.027801880056311!GO:0005765;lysosomal membrane;0.0293506930333278!GO:0009451;RNA modification;0.0310702432744613!GO:0030833;regulation of actin filament polymerization;0.0311955093831051!GO:0030658;transport vesicle membrane;0.0311955093831051!GO:0005083;small GTPase regulator activity;0.0311978142116774!GO:0001772;immunological synapse;0.0323968665421472!GO:0045603;positive regulation of endothelial cell differentiation;0.0331657495843915!GO:0000087;M phase of mitotic cell cycle;0.0335697746812309!GO:0000059;protein import into nucleus, docking;0.0336854442679135!GO:0004659;prenyltransferase activity;0.0337452013299189!GO:0016791;phosphoric monoester hydrolase activity;0.0338438053168115!GO:0005832;chaperonin-containing T-complex;0.0341275416877389!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0342574933992593!GO:0008139;nuclear localization sequence binding;0.0343215602127032!GO:0051235;maintenance of localization;0.0343329411624883!GO:0045454;cell redox homeostasis;0.0344238276228295!GO:0006013;mannose metabolic process;0.034881376769034!GO:0016788;hydrolase activity, acting on ester bonds;0.0350835139388993!GO:0016505;apoptotic protease activator activity;0.0352246552636243!GO:0000781;chromosome, telomeric region;0.0352946067686817!GO:0016763;transferase activity, transferring pentosyl groups;0.0362379882316019!GO:0030695;GTPase regulator activity;0.0366021306422285!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0368294978545374!GO:0000776;kinetochore;0.037547252671626!GO:0019900;kinase binding;0.0375939101982067!GO:0007021;tubulin folding;0.0380183261795113!GO:0042608;T cell receptor binding;0.0381367235235019!GO:0000118;histone deacetylase complex;0.03841210470217!GO:0006406;mRNA export from nucleus;0.0391546121861505!GO:0006144;purine base metabolic process;0.0394650538049191!GO:0000303;response to superoxide;0.0402582506754596!GO:0008320;protein transmembrane transporter activity;0.0404478887027011!GO:0005521;lamin binding;0.0415938138669189!GO:0006672;ceramide metabolic process;0.0416002316269227!GO:0044438;microbody part;0.0418976799289755!GO:0044439;peroxisomal part;0.0418976799289755!GO:0043281;regulation of caspase activity;0.0423810235167377!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0427955049614522!GO:0006354;RNA elongation;0.0430894859941606!GO:0008637;apoptotic mitochondrial changes;0.0434547826779804!GO:0051329;interphase of mitotic cell cycle;0.043528848453611!GO:0009967;positive regulation of signal transduction;0.0440423006745698!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0441640389904624!GO:0016311;dephosphorylation;0.0442292808714328!GO:0019976;interleukin-2 binding;0.0442292808714328!GO:0004911;interleukin-2 receptor activity;0.0442292808714328!GO:0050870;positive regulation of T cell activation;0.0443151534841376!GO:0000305;response to oxygen radical;0.0443151534841376!GO:0005689;U12-dependent spliceosome;0.044574625784955!GO:0001784;phosphotyrosine binding;0.0452923889148288!GO:0046854;phosphoinositide phosphorylation;0.0459323082142373!GO:0007067;mitosis;0.0464387047439409!GO:0004722;protein serine/threonine phosphatase activity;0.0464604722114461!GO:0048522;positive regulation of cellular process;0.0464668490732764!GO:0042809;vitamin D receptor binding;0.0464668490732764!GO:0046979;TAP2 binding;0.0464668490732764!GO:0046977;TAP binding;0.0464668490732764!GO:0046978;TAP1 binding;0.0464668490732764!GO:0031124;mRNA 3'-end processing;0.0464668490732764!GO:0006308;DNA catabolic process;0.0464668490732764!GO:0022411;cellular component disassembly;0.0467646842496192!GO:0022406;membrane docking;0.0478189576610079!GO:0048278;vesicle docking;0.0478189576610079!GO:0045309;protein phosphorylated amino acid binding;0.0488865211857874!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0497190717772268!GO:0031901;early endosome membrane;0.0499611596649601
 |sample_id=11796
 |sample_note=
@@ Line 76: / Line 99: @@
 |sample_tissue=blood
 |top_motifs=PAX3,7:3.86592565902;CREB1:3.38880513386;FOX{D1,D2}:3.25198719333;FOXO1,3,4:2.49860733644;ATF5_CREB3:2.45133187907;FOX{F1,F2,J1}:2.43631066626;BPTF:2.38570842156;RUNX1..3:2.38461077319;CDX1,2,4:2.24643128489;ELF1,2,4:2.24407376505;PBX1:2.24098528978;ATF4:2.19874094409;ATF2:1.96206911804;ELK1,4_GABP{A,B1}:1.93588836796;TLX2:1.92096285827;PDX1:1.88134301297;DMAP1_NCOR{1,2}_SMARC:1.8128988458;HIF1A:1.79715873397;ETS1,2:1.78351889412;PAX6:1.78274149945;FOXN1:1.58266768368;STAT1,3:1.47439356325;RORA:1.4560303337;RFX2..5_RFXANK_RFXAP:1.4176664171;HMX1:1.39707434185;FOX{I1,J2}:1.38120225105;JUN:1.24815934622;PAX2:1.18989127174;ZBTB16:1.17494164262;SPI1:1.11064816437;LEF1_TCF7_TCF7L1,2:1.09535539088;ATF6:1.08815042738;BREu{core}:1.0253038292;NKX6-1,2:0.982456316346;TGIF1:0.952811173812;IRF1,2:0.930645589808;AHR_ARNT_ARNT2:0.860356936339;SPIB:0.856283622404;CRX:0.832542288158;GATA6:0.814569465966;ZEB1:0.745600066616;CUX2:0.719239038812;RFX1:0.716373425227;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.709640848342;SOX2:0.685916059942;FOXP1:0.672700286685;NFATC1..3:0.662285460722;PAX4:0.639537114232;YY1:0.603325462139;SPZ1:0.597821933425;NFIL3:0.595436549139;PITX1..3:0.594272285014;NANOG{mouse}:0.549144759891;NFIX:0.499621578327;FOXQ1:0.453135889953;SNAI1..3:0.429739271202;SOX5:0.417365557013;POU2F1..3:0.366766882483;IKZF2:0.352475422611;LMO2:0.337881853265;T:0.316089271931;VSX1,2:0.313782934857;NFKB1_REL_RELA:0.26657270058;MAFB:0.248240665287;MYOD1:0.205790334653;NRF1:0.162262257192;POU1F1:0.158186043006;SREBF1,2:0.153654418747;HAND1,2:0.145317711007;HES1:0.144182046664;NKX2-1,4:0.127079258377;AR:0.0933371273894;NKX3-1:0.0699806650307;NANOG:0.0459545529473;EP300:0.0451253174674;NKX2-2,8:0.0400256821143;IRF7:0.0347339870554;NR5A1,2:0.0186675150883;HOX{A6,A7,B6,B7}:-0.0141450187514;MYB:-0.0170657931118;OCT4_SOX2{dimer}:-0.0179153518612;HBP1_HMGB_SSRP1_UBTF:-0.0358514263316;NFY{A,B,C}:-0.0561067280284;FOXA2:-0.0608791947436;STAT5{A,B}:-0.0609065970753;EVI1:-0.121600444259;TAL1_TCF{3,4,12}:-0.148400060152;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.153045505958;TBX4,5:-0.218207171236;ZNF143:-0.233926707561;RBPJ:-0.286595911408;FOSL2:-0.289684191301;GFI1:-0.289842862395;NHLH1,2:-0.294645096022;NFE2L1:-0.338905443173;E2F1..5:-0.359359907175;HNF1A:-0.363274955972;EGR1..3:-0.373214337427;HNF4A_NR2F1,2:-0.381210900196;STAT2,4,6:-0.403249151257;HLF:-0.411676765862;PAX5:-0.440280323969;AIRE:-0.458974940369;PRRX1,2:-0.46208521809;DBP:-0.50632330206;ALX1:-0.511128383369;SMAD1..7,9:-0.530755982883;ALX4:-0.541503158061;ZNF384:-0.560978675745;FOS_FOS{B,L1}_JUN{B,D}:-0.565828292085;TOPORS:-0.575078379694;ADNP_IRX_SIX_ZHX:-0.620154033873;RREB1:-0.646803084525;CEBPA,B_DDIT3:-0.65606820872;GCM1,2:-0.665223595101;BACH2:-0.68134732679;MEF2{A,B,C,D}:-0.690277686168;bHLH_family:-0.759577779606;NFE2:-0.76114835489;FOXL1:-0.77042168756;PPARG:-0.798978075553;FOXM1:-0.853435612915;GLI1..3:-0.862246632315;ZNF148:-0.863817392021;TEF:-0.8839873908;SOX{8,9,10}:-0.887799392522;ZFP161:-0.889696805828;NR6A1:-0.920583918886;ONECUT1,2:-0.933254144613;GFI1B:-0.942076314078;MYFfamily:-0.95492505057;SRF:-0.99430222625;PRDM1:-0.994457010319;REST:-1.00647720703;FOXP3:-1.01743483689;PAX8:-1.03345644582;ARID5B:-1.03800968826;MED-1{core}:-1.08567513708;FOXD3:-1.09142335216;HMGA1,2:-1.10231286211;MTF1:-1.12704309822;LHX3,4:-1.1423101413;ZNF238:-1.1467647317;SOX17:-1.16304801513;RXRA_VDR{dimer}:-1.18799366409;POU3F1..4:-1.20729126461;GATA4:-1.24116421762;XBP1:-1.26709452125;MYBL2:-1.27538147798;NKX2-3_NKX2-5:-1.30368550392;MZF1:-1.31377272251;UFEwm:-1.32828097146;HOXA9_MEIS1:-1.33045810806;HOX{A5,B5}:-1.3365219894;TP53:-1.34372583825;POU6F1:-1.36267084057;ZBTB6:-1.36734294851;ESR1:-1.36815652886;NFE2L2:-1.38890590133;POU5F1:-1.42852149122;MTE{core}:-1.48093767962;EBF1:-1.5004116659;SP1:-1.50260058737;NR3C1:-1.50967121296;NR1H4:-1.51633752992;XCPE1{core}:-1.54033038873;PATZ1:-1.56103503115;TFAP4:-1.59178927011;MAZ:-1.59680442103;TBP:-1.61098231167;CDC5L:-1.61203279164;EN1,2:-1.63232473082;GTF2I:-1.64371417253;HIC1:-1.65247899472;ESRRA:-1.66017631442;RXR{A,B,G}:-1.67533984936;TFCP2:-1.69749280017;HOX{A4,D4}:-1.70142203827;ZNF423:-1.70356931582;TEAD1:-1.73177954969;TLX1..3_NFIC{dimer}:-1.7397152854;TFAP2B:-1.74214319186;GTF2A1,2:-1.75878048063;KLF4:-1.805848423;PAX1,9:-1.81872979287;HSF1,2:-1.8571312855;TFAP2{A,C}:-1.86893416408;NKX3-2:-1.89059984681;GZF1:-1.89279487311;TFDP1:-1.98885104213;ZIC1..3:-2.04131538361;IKZF1:-3.11912366106
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11796-124C5;search_select_hide=table117:FF:11796-124C5
 }}

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FF:11796-124C5: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:21, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0