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{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000119,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000486,UBERON:0000914,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0002050,UBERON:0002067,UBERON:0002097,UBERON:0002199,UBERON:0002329,UBERON:0002384,UBERON:0002416,UBERON:0002532,UBERON:0003059,UBERON:0003077,UBERON:0003102,UBERON:0003104,UBERON:0004016,UBERON:0004120,UBERON:0004290,UBERON:0004923,UBERON:0005291,UBERON:0005423,UBERON:0009142
|DRA_sample_Accession=CAGE@SAMD00005148
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000055,CL:0000057,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002320,CL:0002371,CL:0002551,CL:0002620
|accession_numbers=CAGE;DRX008257;DRR009129;DRZ000554;DRZ001939;DRZ011904;DRZ013289
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002097,UBERON:0002199,UBERON:0002384,UBERON:0000479,UBERON:0000064,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0004923,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003102,UBERON:0010317,UBERON:0002067,UBERON:0002416
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0000057,CL:0002620,CL:0002551
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000057,FF:0000250,FF:0000001,FF:0000062
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr7:19157248..19157268,-!p1@TWIST1!1.73!141.39!TWIST1;;chr1:170632285..170632309,+!p1@PRRX1!1.54!38.28!PRRX1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.52!32.41!HOXC5;;chr1:170633348..170633399,+!p2@PRRX1!1.42!34.41!PRRX1;;chr12:66218255..66218304,+!p3@HMGA2!1.38!60.13!HMGA2;;chr19:46801639..46801699,+!p1@HIF3A!1.32!19.85!HIF3A;;chr6:34204921..34204939,+!p3@HMGA1!1.31!558.64!HMGA1;;chr5:2751762..2751784,-!p1@IRX2!1.30!18.91!IRX2;;chr6:85474299..85474324,-!p1@TBX18!1.25!30.06!TBX18;;chr1:170633262..170633285,+!p3@PRRX1!1.19!16.44!PRRX1;;chr12:66218212..66218244,+!p5@HMGA2!1.18!20.32!HMGA2;;chr2:239756671..239756732,+!p1@TWIST2!1.17!44.16!TWIST2;;chr12:66218598..66218645,+!p2@HMGA2!1.16!62.24!HMGA2;;chr2:239756739..239756755,+!p2@TWIST2!1.16!23.02!TWIST2;;chr15:57511609..57511651,+!p2@TCF12!1.13!21.26!TCF12;;chr20:55204351..55204377,+!p1@TFAP2C!1.13!15.97!TFAP2C;;chr15:83953397..83953425,-!p1@BNC1!1.11!13.62!BNC1;;chr2:102091566..102091581,-!p1@RFX8!1.11!11.98!RFX8;;chr2:5832508..5832524,+!p1@SOX11!1.10!11.51!SOX11;;chr12:66218183..66218209,+!p4@HMGA2!1.06!20.20!HMGA2;;chr17:46667594..46667619,-!p1@HOXB3!1.03!9.75!HOXB3;;chr6:85473156..85473210,-!p2@TBX18!1.02!11.51!TBX18;;chr2:176994408..176994492,+!p1@HOXD8!1.02!9.51!HOXD8;;chr17:46675558..46675577,-!p2@HOXB6!1.01!9.28!HOXB6;;chr18:52969844..52969895,-!p27@TCF4!1.01!9.16!TCF4;;chr5:72744594..72744609,-!p1@FOXD1!0.99!40.87!FOXD1;;chr7:27205136..27205164,-!p1@HOXA9!0.99!8.81!HOXA9;;chr12:54402745..54402788,+!p1@HOXC8!0.96!8.22!HOXC8;;chr17:46675420..46675465,-!p3@HOXB6!0.95!9.28!HOXB6;;chr7:14029283..14029311,-!p1@ETV1!0.94!42.98!ETV1;;chr20:42543441..42543497,+!p1@TOX2!0.93!34.76!TOX2;;chr17:46682321..46682362,-!p1@HOXB6!0.93!7.52!HOXB6;;chr1:170632137..170632172,+!p10@PRRX1!0.92!7.28!PRRX1;;chr3:12329358..12329393,+!p3@PPARG!0.91!18.32!PPARG;;chr17:46667628..46667642,-!p2@HOXB3!0.91!7.05!HOXB3;;chr18:52969674..52969685,-!p24@TCF4!0.91!7.05!TCF4;;chr12:54393880..54393962,+!p1@HOXC9!0.91!7.05!HOXC9;;chr8:93074803..93074845,-!p1@RUNX1T1!0.91!7.05!RUNX1T1;;chr1:170632250..170632277,+!p7@PRRX1!0.90!6.93!PRRX1;;chr17:46622114..46622138,-!p4@HOXB2!0.89!10.69!HOXB2;;chr17:41622765..41622821,-!p2@ETV4!0.89!10.57!ETV4;;chr4:299227..299272,-!p1@ZNF732!0.89!6.81!ZNF732;;chr1:170632477..170632506,+!p6@PRRX1!0.89!6.69!PRRX1;;chr17:41277372..41277418,-!p1@BRCA1!0.88!25.13!BRCA1;;chr2:19558373..19558392,-!p1@OSR1!0.87!18.44!OSR1;;chr4:174450089..174450153,-!p2@HAND2!0.87!6.46!HAND2;;chr17:46622070..46622109,-!p1@HOXB2!0.86!14.44!HOXB2;;chr17:41623009..41623053,-!p4@ETV4!0.86!10.33!ETV4;;chr17:46622205..46622218,-!p3@HOXB2!0.86!7.40!HOXB2;;chr2:102091144..102091183,-!p2@RFX8!0.86!6.22!RFX8;;chr7:27205106..27205134,-!p2@HOXA9!0.86!6.22!HOXA9;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.86!6.22!HOXC5;;chr1:170632723..170632739,+!p8@PRRX1!0.84!5.99!PRRX1;;chr17:46690839..46690884,-!p1@HOXB8!0.84!5.87!HOXB8;;chr22:19748231..19748317,+!p1@TBX1!0.84!5.87!TBX1;;chr6:85474198..85474212,-!p3@TBX18!0.84!5.87!TBX18;;chr11:46299199..46299233,+!p1@CREB3L1!0.83!31.82!CREB3L1;;chr11:65686732..65686756,+!p2@DRAP1!0.83!25.84!DRAP1;;chr8:93074848..93074871,-!p3@RUNX1T1!0.83!5.75!RUNX1T1;;chr11:65667846..65667868,-!p1@FOSL1!0.81!154.54!FOSL1;;chr7:19157043..19157088,-!p2@TWIST1!0.81!14.44!TWIST1;;chr12:66218378..66218401,+!p6@HMGA2!0.81!8.81!HMGA2;;chr4:174451370..174451387,-!p1@HAND2!0.81!5.40!HAND2;;chr6:34204672..34204692,+!p1@HMGA1!0.80!652.11!HMGA1;;chr2:200322654..200322707,-!p2@SATB2!0.80!7.99!SATB2;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.80!5.75!GLIS1;;chr12:2986206..2986258,-!p2@FOXM1!0.79!33.70!FOXM1;;chr3:157823517..157823562,-!p1@SHOX2!0.79!5.64!SHOX2;;chr16:86612320..86612394,+!p1@FOXL1!0.79!5.17!FOXL1;;chr17:46622229..46622257,-!p6@HOXB2!0.77!5.87!HOXB2;;chr2:223163706..223163730,-!p1@PAX3!0.77!4.93!PAX3;;chr5:3595977..3595999,+!p1@IRX1!0.77!4.93!IRX1;;chr14:61116183..61116208,-!p1@SIX1!0.76!19.85!SIX1;;chr3:12329397..12329433,+!p2@PPARG!0.76!11.51!PPARG;;chr6:45390025..45390076,+!p2@RUNX2!0.75!11.98!RUNX2;;chr20:42543506..42543549,+!p2@TOX2!0.74!11.74!TOX2;;chr9:132427972..132428056,+!p1@PRRX2!0.74!5.99!PRRX2;;chr12:54378923..54378966,+!p1@HOXC10!0.74!4.46!HOXC10;;chr10:119303078..119303169,+!p2@EMX2!0.73!4.35!EMX2;;chr12:54447637..54447659,+!p4@HOXC4!0.72!4.23!HOXC4;;chr12:96588143..96588185,+!p1@ELK3!0.71!56.37!ELK3;;chr12:66218443..66218461,+!p8@HMGA2!0.71!5.40!HMGA2;;chr5:2751785..2751808,-!p2@IRX2!0.71!4.11!IRX2;;chr7:27224842..27224872,-!p1@HOXA11!0.71!4.11!HOXA11;;chr8:49833978..49833996,-!p1@SNAI2!0.70!94.07!SNAI2;;chr5:158526917..158526932,-!p1@EBF1!0.70!10.92!EBF1;;chr1:8934931..8934947,-!p4@ENO1!0.69!14.33!ENO1;;chr12:66218152..66218174,+!p10@HMGA2!0.69!4.23!HMGA2;;chr12:54379029..54379057,+!p2@HOXC10!0.69!3.88!HOXC10;;chr12:115121962..115121987,-!p1@TBX3!0.68!36.29!TBX3;;chr1:170632439..170632465,+!p11@PRRX1!0.68!3.76!PRRX1;;chr8:128748308..128748324,+!p2@MYC!0.67!119.55!MYC;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.67!19.02!TAL1;;chr3:141121847..141121868,+!p5@ZBTB38!0.67!5.99!ZBTB38;;chr4:81118647..81118666,+!p1@PRDM8!0.67!5.05!PRDM8;;chr2:102091590..102091601,-!p5@RFX8!0.67!3.64!RFX8;;chr17:46675469..46675481,-!p4@HOXB6!0.67!3.64!HOXB6;;chr12:54394309..54394336,+!p2@HOXC9!0.67!3.64!HOXC9;;chr12:54402790..54402805,+!p2@HOXC8!0.67!3.64!HOXC8;;chr12:66218420..66218439,+!p12@HMGA2!0.67!3.64!HMGA2;;chr11:65686802..65686818,+!p6@DRAP1!0.66!6.69!DRAP1;;chr17:46675586..46675600,-!p6@HOXB6!0.66!3.52!HOXB6;;chrX:106960285..106960299,-!p1@TSC22D3!0.65!109.57!TSC22D3;;chr17:41622925..41622976,-!p3@ETV4!0.65!5.52!ETV4;;chr17:46687959..46688007,-!p2@HOXB7!0.65!5.05!HOXB7;;chr1:170632959..170632987,+!p4@PRRX1!0.65!3.88!PRRX1;;chr12:2986275..2986363,-!p1@FOXM1!0.64!40.05!FOXM1;;chr6:31126291..31126399,+!p1@TCF19!0.64!37.58!TCF19;;chr8:49833948..49833973,-!p2@SNAI2!0.64!24.90!SNAI2;;chr19:22817119..22817145,+!p1@ZNF492!0.64!6.11!ZNF492;;chr11:46299539..46299620,+!p2@CREB3L1!0.64!6.11!CREB3L1;;chr17:46675539..46675551,-!p7@HOXB6!0.64!3.41!HOXB6;;chr19:42636586..42636607,-!p1@POU2F2!0.63!10.33!POU2F2;;chr20:50721803..50721857,-!p2@ZFP64!0.63!5.52!ZFP64;;chr3:147127142..147127168,+!p1@ZIC1!0.63!3.29!ZIC1;;chr5:321810..321877,+!p1@AHRR!0.62!11.51!AHRR;;chr1:170632115..170632136,+!p9@PRRX1!0.62!3.17!PRRX1;;chr14:55493763..55493824,-!p1@WDHD1!0.61!27.95!WDHD1;;chr6:45390002..45390023,+!p6@RUNX2!0.61!5.87!RUNX2;;chr7:27192185..27192209,-!p1@HOXA3!0.61!3.05!HOXA3;;chr1:170633194..170633205,+!p18@PRRX1!0.61!3.05!PRRX1;;chr17:41623692..41623715,-!p1@ETV4!0.60!15.15!ETV4;;chr18:22932080..22932170,-!p1@ZNF521!0.60!14.91!ZNF521;;chr4:4861385..4861398,+!p1@MSX1!0.60!10.22!MSX1;;chr12:54394059..54394088,+!p3@HOXC9!0.60!2.94!HOXC9;;chr5:3595961..3595975,+!p3@IRX1!0.60!2.94!IRX1;;chr12:77459306..77459365,-!p1@E2F7!0.59!44.27!E2F7;;chr5:176738887..176738934,-!p1@MXD3!0.59!23.02!MXD3;;chr16:86600426..86600441,+!p1@FOXC2!0.59!8.10!FOXC2;;chr12:66218573..66218596,+!p7@HMGA2!0.59!4.70!HMGA2;;chr17:46622440..46622477,-!p5@HOXB2!0.59!3.29!HOXB2;;chr21:47063625..47063658,+!p1@PCBP3!0.58!14.56!PCBP3;;chr6:155635583..155635644,-!p1@TFB1M!0.57!43.45!TFB1M;;chr7:42276822..42276895,-!p2@GLI3!0.57!9.51!GLI3;;chr17:46655704..46655718,-!p2@HOXB4!0.57!4.46!HOXB4;;chr3:147111231..147111281,+!p3@ZIC1!0.57!2.70!ZIC1;;chr20:32274179..32274213,-!p1@E2F1!0.56!21.73!E2F1;;chr3:21792585..21792625,-!p2@ZNF385D!0.56!3.05!ZNF385D;;chr3:37217736..37217753,-!p2@LRRFIP2!0.55!13.04!LRRFIP2;;chr11:113930291..113930339,+!p2@ZBTB16!0.55!4.70!ZBTB16;;chr5:72744562..72744573,-!p3@FOXD1!0.55!3.41!FOXD1;;chr19:23299814..23299844,+!p1@ZNF730!0.55!3.29!ZNF730;;chr17:46671108..46671147,-!p1@HOXB5!0.55!2.58!HOXB5;;chr17:8027418..8027432,-!p1@HES7!0.55!2.58!HES7;;chr6:85473227..85473243,-!p5@TBX18!0.55!2.58!TBX18;;chr9:132427883..132427951,+!p2@PRRX2!0.55!2.58!PRRX2;;chr2:119604456..119604501,-!p2@EN1!0.55!2.58!EN1;;chr1:119530493..119530572,-!p1@TBX15!0.55!2.58!TBX15;;chr18:52989031..52989079,-!p2@TCF4!0.54!6.81!TCF4;;chr16:68573640..68573660,+!p3@ZFP90!0.54!3.52!ZFP90;;chr12:54447599..54447630,+!p3@HOXC4!0.54!3.17!HOXC4;;chr3:12329320..12329338,+!p4@PPARG!0.54!2.70!PPARG;;chr3:141121820..141121838,+!p9@ZBTB38!0.54!2.47!ZBTB38;;chr5:3595934..3595957,+!p2@IRX1!0.54!2.47!IRX1;;chr12:54380404..54380433,+!p3@HOXC10!0.54!2.47!HOXC10;;chr12:54402729..54402743,+!p3@HOXC8!0.54!2.47!HOXC8;;chr12:66218469..66218477,+!p16@HMGA2!0.54!2.47!HMGA2;;chr4:1873100..1873152,+!p1@WHSC1!0.53!23.13!WHSC1;;chr19:20188776..20188826,+!p1@ZNF90!0.53!7.75!ZNF90;;chr1:247171347..247171366,-!p2@ZNF695!0.53!5.05!ZNF695;;chr1:8926441..8926473,-!p10@ENO1!0.53!3.99!ENO1;;chr6:45390077..45390105,+!p9@RUNX2!0.53!3.29!RUNX2;;chr17:46688334..46688385,-!p1@HOXB7!0.52!3.64!HOXB7;;chr19:38720294..38720348,-!p1@DPF1!0.52!3.05!DPF1;;chr8:25902876..25902936,-!p1@EBF2!0.52!2.35!EBF2;;chr4:111558135..111558198,-!p2@PITX2!0.52!2.35!PITX2;;chr17:41622731..41622764,-!p5@ETV4!0.52!2.35!ETV4;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!0.51!5.75!SOHLH2;;chr6:45390300..45390335,+!p4@RUNX2!0.51!3.88!RUNX2;;chr7:14028488..14028516,-!p2@ETV1!0.51!2.58!ETV1;;chr10:119302645..119302712,+!p3@EMX2!0.51!2.23!EMX2;;chr12:54410948..54410992,+!p3@HOXC5!0.51!2.23!HOXC5;;chr1:170632310..170632321,+!p15@PRRX1!0.51!2.23!PRRX1;;chr4:109089095..109089144,-!p6@LEF1!0.51!2.23!LEF1;;chr19:23433144..23433204,-!p1@ZNF724P!0.50!12.33!ZNF724P;;chr8:67525473..67525518,-!p1@MYBL1!0.50!5.99!MYBL1;;chr14:61116168..61116180,-!p2@SIX1!0.50!2.58!SIX1;;chr10:114710244..114710257,+!p3@TCF7L2!0.49!6.93!TCF7L2;;chr5:158527104..158527135,-!p4@EBF1!0.49!2.11!EBF1;;chr7:27196267..27196311,-!p1@HOXA7!0.49!2.11!HOXA7;;chr3:147111198..147111225,+!p4@ZIC1!0.49!2.11!ZIC1;;chr15:57511589..57511608,+!p4@TCF12!0.49!2.11!TCF12;;chr1:170632647..170632659,+!p17@PRRX1!0.49!2.11!PRRX1;;chr1:170633245..170633256,+!p14@PRRX1!0.49!2.11!PRRX1;;chr15:42749722..42749739,-!p2@ZFP106!0.48!4.23!ZFP106;;chr17:41622834..41622883,-!p6@ETV4!0.48!2.58!ETV4;;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|expression_enrichment_score=chr7:19157248..19157268,-!p1@TWIST1!1.73!141.39!TWIST1;;chr1:170632285..170632309,+!p1@PRRX1!1.54!38.28!PRRX1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.52!32.41!HOXC5;;chr1:170633348..170633399,+!p2@PRRX1!1.42!34.41!PRRX1;;chr12:66218255..66218304,+!p3@HMGA2!1.38!60.13!HMGA2;;chr19:46801639..46801699,+!p1@HIF3A!1.32!19.85!HIF3A;;chr6:34204921..34204939,+!p3@HMGA1!1.31!558.64!HMGA1;;chr5:2751762..2751784,-!p1@IRX2!1.30!18.91!IRX2;;chr6:85474299..85474324,-!p1@TBX18!1.25!30.06!TBX18;;chr1:170633262..170633285,+!p3@PRRX1!1.19!16.44!PRRX1;;chr12:66218212..66218244,+!p5@HMGA2!1.18!20.32!HMGA2;;chr2:239756671..239756732,+!p1@TWIST2!1.17!44.16!TWIST2;;chr12:66218598..66218645,+!p2@HMGA2!1.16!62.24!HMGA2;;chr2:239756739..239756755,+!p2@TWIST2!1.16!23.02!TWIST2;;chr15:57511609..57511651,+!p2@TCF12!1.13!21.26!TCF12;;chr20:55204351..55204377,+!p1@TFAP2C!1.13!15.97!TFAP2C;;chr15:83953397..83953425,-!p1@BNC1!1.11!13.62!BNC1;;chr2:102091566..102091581,-!p1@RFX8!1.11!11.98!RFX8;;chr2:5832508..5832524,+!p1@SOX11!1.10!11.51!SOX11;;chr12:66218183..66218209,+!p4@HMGA2!1.06!20.20!HMGA2;;chr17:46667594..46667619,-!p1@HOXB3!1.03!9.75!HOXB3;;chr6:85473156..85473210,-!p2@TBX18!1.02!11.51!TBX18;;chr2:176994408..176994492,+!p1@HOXD8!1.02!9.51!HOXD8;;chr17:46675558..46675577,-!p2@HOXB6!1.01!9.28!HOXB6;;chr18:52969844..52969895,-!p27@TCF4!1.01!9.16!TCF4;;chr5:72744594..72744609,-!p1@FOXD1!0.99!40.87!FOXD1;;chr7:27205136..27205164,-!p1@HOXA9!0.99!8.81!HOXA9;;chr12:54402745..54402788,+!p1@HOXC8!0.96!8.22!HOXC8;;chr17:46675420..46675465,-!p3@HOXB6!0.95!9.28!HOXB6;;chr7:14029283..14029311,-!p1@ETV1!0.94!42.98!ETV1;;chr20:42543441..42543497,+!p1@TOX2!0.93!34.76!TOX2;;chr17:46682321..46682362,-!p1@HOXB6!0.93!7.52!HOXB6;;chr1:170632137..170632172,+!p10@PRRX1!0.92!7.28!PRRX1;;chr3:12329358..12329393,+!p3@PPARG!0.91!18.32!PPARG;;chr17:46667628..46667642,-!p2@HOXB3!0.91!7.05!HOXB3;;chr18:52969674..52969685,-!p24@TCF4!0.91!7.05!TCF4;;chr12:54393880..54393962,+!p1@HOXC9!0.91!7.05!HOXC9;;chr8:93074803..93074845,-!p1@RUNX1T1!0.91!7.05!RUNX1T1;;chr1:170632250..170632277,+!p7@PRRX1!0.90!6.93!PRRX1;;chr17:46622114..46622138,-!p4@HOXB2!0.89!10.69!HOXB2;;chr17:41622765..41622821,-!p2@ETV4!0.89!10.57!ETV4;;chr4:299227..299272,-!p1@ZNF732!0.89!6.81!ZNF732;;chr1:170632477..170632506,+!p6@PRRX1!0.89!6.69!PRRX1;;chr17:41277372..41277418,-!p1@BRCA1!0.88!25.13!BRCA1;;chr2:19558373..19558392,-!p1@OSR1!0.87!18.44!OSR1;;chr4:174450089..174450153,-!p2@HAND2!0.87!6.46!HAND2;;chr17:46622070..46622109,-!p1@HOXB2!0.86!14.44!HOXB2;;chr17:41623009..41623053,-!p4@ETV4!0.86!10.33!ETV4;;chr17:46622205..46622218,-!p3@HOXB2!0.86!7.40!HOXB2;;chr2:102091144..102091183,-!p2@RFX8!0.86!6.22!RFX8;;chr7:27205106..27205134,-!p2@HOXA9!0.86!6.22!HOXA9;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.86!6.22!HOXC5;;chr1:170632723..170632739,+!p8@PRRX1!0.84!5.99!PRRX1;;chr17:46690839..46690884,-!p1@HOXB8!0.84!5.87!HOXB8;;chr22:19748231..19748317,+!p1@TBX1!0.84!5.87!TBX1;;chr6:85474198..85474212,-!p3@TBX18!0.84!5.87!TBX18;;chr11:46299199..46299233,+!p1@CREB3L1!0.83!31.82!CREB3L1;;chr11:65686732..65686756,+!p2@DRAP1!0.83!25.84!DRAP1;;chr8:93074848..93074871,-!p3@RUNX1T1!0.83!5.75!RUNX1T1;;chr11:65667846..65667868,-!p1@FOSL1!0.81!154.54!FOSL1;;chr7:19157043..19157088,-!p2@TWIST1!0.81!14.44!TWIST1;;chr12:66218378..66218401,+!p6@HMGA2!0.81!8.81!HMGA2;;chr4:174451370..174451387,-!p1@HAND2!0.81!5.40!HAND2;;chr6:34204672..34204692,+!p1@HMGA1!0.80!652.11!HMGA1;;chr2:200322654..200322707,-!p2@SATB2!0.80!7.99!SATB2;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.80!5.75!GLIS1;;chr12:2986206..2986258,-!p2@FOXM1!0.79!33.70!FOXM1;;chr3:157823517..157823562,-!p1@SHOX2!0.79!5.64!SHOX2;;chr16:86612320..86612394,+!p1@FOXL1!0.79!5.17!FOXL1;;chr17:46622229..46622257,-!p6@HOXB2!0.77!5.87!HOXB2;;chr2:223163706..223163730,-!p1@PAX3!0.77!4.93!PAX3;;chr5:3595977..3595999,+!p1@IRX1!0.77!4.93!IRX1;;chr14:61116183..61116208,-!p1@SIX1!0.76!19.85!SIX1;;chr3:12329397..12329433,+!p2@PPARG!0.76!11.51!PPARG;;chr6:45390025..45390076,+!p2@RUNX2!0.75!11.98!RUNX2;;chr20:42543506..42543549,+!p2@TOX2!0.74!11.74!TOX2;;chr9:132427972..132428056,+!p1@PRRX2!0.74!5.99!PRRX2;;chr12:54378923..54378966,+!p1@HOXC10!0.74!4.46!HOXC10;;chr10:119303078..119303169,+!p2@EMX2!0.73!4.35!EMX2;;chr12:54447637..54447659,+!p4@HOXC4!0.72!4.23!HOXC4;;chr12:96588143..96588185,+!p1@ELK3!0.71!56.37!ELK3;;chr12:66218443..66218461,+!p8@HMGA2!0.71!5.40!HMGA2;;chr5:2751785..2751808,-!p2@IRX2!0.71!4.11!IRX2;;chr7:27224842..27224872,-!p1@HOXA11!0.71!4.11!HOXA11;;chr8:49833978..49833996,-!p1@SNAI2!0.70!94.07!SNAI2;;chr5:158526917..158526932,-!p1@EBF1!0.70!10.92!EBF1;;chr1:8934931..8934947,-!p4@ENO1!0.69!14.33!ENO1;;chr12:66218152..66218174,+!p10@HMGA2!0.69!4.23!HMGA2;;chr12:54379029..54379057,+!p2@HOXC10!0.69!3.88!HOXC10;;chr12:115121962..115121987,-!p1@TBX3!0.68!36.29!TBX3;;chr1:170632439..170632465,+!p11@PRRX1!0.68!3.76!PRRX1;;chr8:128748308..128748324,+!p2@MYC!0.67!119.55!MYC;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.67!19.02!TAL1;;chr3:141121847..141121868,+!p5@ZBTB38!0.67!5.99!ZBTB38;;chr4:81118647..81118666,+!p1@PRDM8!0.67!5.05!PRDM8;;chr2:102091590..102091601,-!p5@RFX8!0.67!3.64!RFX8;;chr17:46675469..46675481,-!p4@HOXB6!0.67!3.64!HOXB6;;chr12:54394309..54394336,+!p2@HOXC9!0.67!3.64!HOXC9;;chr12:54402790..54402805,+!p2@HOXC8!0.67!3.64!HOXC8;;chr12:66218420..66218439,+!p12@HMGA2!0.67!3.64!HMGA2;;chr11:65686802..65686818,+!p6@DRAP1!0.66!6.69!DRAP1;;chr17:46675586..46675600,-!p6@HOXB6!0.66!3.52!HOXB6;;chrX:106960285..106960299,-!p1@TSC22D3!0.65!109.57!TSC22D3;;chr17:41622925..41622976,-!p3@ETV4!0.65!5.52!ETV4;;chr17:46687959..46688007,-!p2@HOXB7!0.65!5.05!HOXB7;;chr1:170632959..170632987,+!p4@PRRX1!0.65!3.88!PRRX1;;chr12:2986275..2986363,-!p1@FOXM1!0.64!40.05!FOXM1;;chr6:31126291..31126399,+!p1@TCF19!0.64!37.58!TCF19;;chr8:49833948..49833973,-!p2@SNAI2!0.64!24.90!SNAI2;;chr19:22817119..22817145,+!p1@ZNF492!0.64!6.11!ZNF492;;chr11:46299539..46299620,+!p2@CREB3L1!0.64!6.11!CREB3L1;;chr17:46675539..46675551,-!p7@HOXB6!0.64!3.41!HOXB6;;chr19:42636586..42636607,-!p1@POU2F2!0.63!10.33!POU2F2;;chr20:50721803..50721857,-!p2@ZFP64!0.63!5.52!ZFP64;;chr3:147127142..147127168,+!p1@ZIC1!0.63!3.29!ZIC1;;chr5:321810..321877,+!p1@AHRR!0.62!11.51!AHRR;;chr1:170632115..170632136,+!p9@PRRX1!0.62!3.17!PRRX1;;chr14:55493763..55493824,-!p1@WDHD1!0.61!27.95!WDHD1;;chr6:45390002..45390023,+!p6@RUNX2!0.61!5.87!RUNX2;;chr7:27192185..27192209,-!p1@HOXA3!0.61!3.05!HOXA3;;chr1:170633194..170633205,+!p18@PRRX1!0.61!3.05!PRRX1;;chr17:41623692..41623715,-!p1@ETV4!0.60!15.15!ETV4;;chr18:22932080..22932170,-!p1@ZNF521!0.60!14.91!ZNF521;;chr4:4861385..4861398,+!p1@MSX1!0.60!10.22!MSX1;;chr12:54394059..54394088,+!p3@HOXC9!0.60!2.94!HOXC9;;chr5:3595961..3595975,+!p3@IRX1!0.60!2.94!IRX1;;chr12:77459306..77459365,-!p1@E2F7!0.59!44.27!E2F7;;chr5:176738887..176738934,-!p1@MXD3!0.59!23.02!MXD3;;chr16:86600426..86600441,+!p1@FOXC2!0.59!8.10!FOXC2;;chr12:66218573..66218596,+!p7@HMGA2!0.59!4.70!HMGA2;;chr17:46622440..46622477,-!p5@HOXB2!0.59!3.29!HOXB2;;chr21:47063625..47063658,+!p1@PCBP3!0.58!14.56!PCBP3;;chr6:155635583..155635644,-!p1@TFB1M!0.57!43.45!TFB1M;;chr7:42276822..42276895,-!p2@GLI3!0.57!9.51!GLI3;;chr17:46655704..46655718,-!p2@HOXB4!0.57!4.46!HOXB4;;chr3:147111231..147111281,+!p3@ZIC1!0.57!2.70!ZIC1;;chr20:32274179..32274213,-!p1@E2F1!0.56!21.73!E2F1;;chr3:21792585..21792625,-!p2@ZNF385D!0.56!3.05!ZNF385D;;chr3:37217736..37217753,-!p2@LRRFIP2!0.55!13.04!LRRFIP2;;chr11:113930291..113930339,+!p2@ZBTB16!0.55!4.70!ZBTB16;;chr5:72744562..72744573,-!p3@FOXD1!0.55!3.41!FOXD1;;chr19:23299814..23299844,+!p1@ZNF730!0.55!3.29!ZNF730;;chr17:46671108..46671147,-!p1@HOXB5!0.55!2.58!HOXB5;;chr17:8027418..8027432,-!p1@HES7!0.55!2.58!HES7;;chr6:85473227..85473243,-!p5@TBX18!0.55!2.58!TBX18;;chr9:132427883..132427951,+!p2@PRRX2!0.55!2.58!PRRX2;;chr2:119604456..119604501,-!p2@EN1!0.55!2.58!EN1;;chr1:119530493..119530572,-!p1@TBX15!0.55!2.58!TBX15;;chr18:52989031..52989079,-!p2@TCF4!0.54!6.81!TCF4;;chr16:68573640..68573660,+!p3@ZFP90!0.54!3.52!ZFP90;;chr12:54447599..54447630,+!p3@HOXC4!0.54!3.17!HOXC4;;chr3:12329320..12329338,+!p4@PPARG!0.54!2.70!PPARG;;chr3:141121820..141121838,+!p9@ZBTB38!0.54!2.47!ZBTB38;;chr5:3595934..3595957,+!p2@IRX1!0.54!2.47!IRX1;;chr12:54380404..54380433,+!p3@HOXC10!0.54!2.47!HOXC10;;chr12:54402729..54402743,+!p3@HOXC8!0.54!2.47!HOXC8;;chr12:66218469..66218477,+!p16@HMGA2!0.54!2.47!HMGA2;;chr4:1873100..1873152,+!p1@WHSC1!0.53!23.13!WHSC1;;chr19:20188776..20188826,+!p1@ZNF90!0.53!7.75!ZNF90;;chr1:247171347..247171366,-!p2@ZNF695!0.53!5.05!ZNF695;;chr1:8926441..8926473,-!p10@ENO1!0.53!3.99!ENO1;;chr6:45390077..45390105,+!p9@RUNX2!0.53!3.29!RUNX2;;chr17:46688334..46688385,-!p1@HOXB7!0.52!3.64!HOXB7;;chr19:38720294..38720348,-!p1@DPF1!0.52!3.05!DPF1;;chr8:25902876..25902936,-!p1@EBF2!0.52!2.35!EBF2;;chr4:111558135..111558198,-!p2@PITX2!0.52!2.35!PITX2;;chr17:41622731..41622764,-!p5@ETV4!0.52!2.35!ETV4;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!0.51!5.75!SOHLH2;;chr6:45390300..45390335,+!p4@RUNX2!0.51!3.88!RUNX2;;chr7:14028488..14028516,-!p2@ETV1!0.51!2.58!ETV1;;chr10:119302645..119302712,+!p3@EMX2!0.51!2.23!EMX2;;chr12:54410948..54410992,+!p3@HOXC5!0.51!2.23!HOXC5;;chr1:170632310..170632321,+!p15@PRRX1!0.51!2.23!PRRX1;;chr4:109089095..109089144,-!p6@LEF1!0.51!2.23!LEF1;;chr19:23433144..23433204,-!p1@ZNF724P!0.50!12.33!ZNF724P;;chr8:67525473..67525518,-!p1@MYBL1!0.50!5.99!MYBL1;;chr14:61116168..61116180,-!p2@SIX1!0.50!2.58!SIX1;;chr10:114710244..114710257,+!p3@TCF7L2!0.49!6.93!TCF7L2;;chr5:158527104..158527135,-!p4@EBF1!0.49!2.11!EBF1;;chr7:27196267..27196311,-!p1@HOXA7!0.49!2.11!HOXA7;;chr3:147111198..147111225,+!p4@ZIC1!0.49!2.11!ZIC1;;chr15:57511589..57511608,+!p4@TCF12!0.49!2.11!TCF12;;chr1:170632647..170632659,+!p17@PRRX1!0.49!2.11!PRRX1;;chr1:170633245..170633256,+!p14@PRRX1!0.49!2.11!PRRX1;;chr15:42749722..42749739,-!p2@ZFP106!0.48!4.23!ZFP106;;chr17:41622834..41622883,-!p6@ETV4!0.48!2.58!ETV4;;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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000057;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002551;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002620;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002067;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002097;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002416
|ffid_belonging_in_development=CL:0000134
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 35: Line 42:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Dermal%252c%2520donor4.CNhs12052.11450-119A1.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Dermal%252c%2520donor4.CNhs12052.11450-119A1.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Dermal%252c%2520donor4.CNhs12052.11450-119A1.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Dermal%252c%2520donor4.CNhs12052.11450-119A1.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Fibroblast%2520-%2520Dermal%252c%2520donor4.CNhs12052.11450-119A1.hg38.nobarcode.ctss.bed.gz
|id=FF:11450-119A1
|id=FF:11450-119A1
|is_a=EFO:0002091;;FF:0000002;;FF:0000062;;FF:0000210
|is_a=EFO:0002091;;FF:0000062
|is_obsolete=
|library_id=CNhs12052
|library_id_phase_based=2:CNhs12052
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11450
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11450
|name=Fibroblast - Dermal, donor4
|name=Fibroblast - Dermal, donor4
|namespace=FANTOM5
|namespace=FANTOM5
Line 42: Line 61:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs12052,LSID838,release011,COMPLETED
|profile_hcage=CNhs12052,LSID838,release011,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
|repeat_enrich_byfamily=0,0,0.0241110376195271,0,0,0,0,-0.160318030086386,0.0482220752390542,-0.277362132193514,-0.0357567406531445,0,0,0,0,0,0,0,0,0,0,0,0.0482220752390542,0,0.107235251911383,0,0,0,0,0,-0.0063370089337965,0,0,0.127601672480949,0,0,0,0,0,0,0,0,0,0,0,0,-0.133136876779107,0,0,0,0,0,0,0,0,0.0215954225542962,0,0,0,0.313215392568308,0,0.0395393107312747,0.0482220752390542,-0.00537147390834412,0,0,0.0337305435467595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0359966407152165,0.0458104436671305,0,0,0,0,0,0,0,0,0,-0.010224751572771,-0.127577442006115,0,0.167239921379507,0,0,-0.0498132759986522,0.0301870248745493,0,0,0.0241110376195271,0.0482220752390542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.060234102361693,0,0,0,-0.158166450422989,-0.616327444537766,0,0,0,0.0237900816039174,0,0
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|rna_box=119
|rna_box=119
|rna_catalog_number=SC2305
|rna_catalog_number=SC2305
Line 57: Line 79:
|rna_weight_ug=10
|rna_weight_ug=10
|sample_age=fetal
|sample_age=fetal
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_line=
Line 69: Line 92:
|sample_ethnicity=unknown
|sample_ethnicity=unknown
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.26453303300389e-282!GO:0043226;organelle;8.08706550369301e-232!GO:0043229;intracellular organelle;1.75053384989484e-231!GO:0043231;intracellular membrane-bound organelle;4.59026329422315e-230!GO:0043227;membrane-bound organelle;1.08016011586679e-229!GO:0005737;cytoplasm;3.42263684679892e-185!GO:0044422;organelle part;1.00709201015949e-168!GO:0044446;intracellular organelle part;2.84532415698663e-167!GO:0044444;cytoplasmic part;1.42207536135165e-128!GO:0032991;macromolecular complex;2.33234141678162e-113!GO:0044237;cellular metabolic process;4.34995914133762e-111!GO:0044238;primary metabolic process;4.77313255559316e-110!GO:0005634;nucleus;1.29069827509765e-109!GO:0043170;macromolecule metabolic process;2.19430686137372e-102!GO:0030529;ribonucleoprotein complex;1.11467365028561e-99!GO:0044428;nuclear part;7.3043969163691e-90!GO:0043233;organelle lumen;4.45608616684552e-86!GO:0031974;membrane-enclosed lumen;4.45608616684552e-86!GO:0003723;RNA binding;1.9682190669816e-78!GO:0005739;mitochondrion;2.02925608241933e-74!GO:0005515;protein binding;1.05986645763776e-71!GO:0043283;biopolymer metabolic process;5.21746405535979e-65!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.45555380829707e-61!GO:0006396;RNA processing;4.38582532001403e-60!GO:0005840;ribosome;2.17787615877482e-58!GO:0043234;protein complex;4.14546802417264e-56!GO:0010467;gene expression;9.61794225684853e-56!GO:0016043;cellular component organization and biogenesis;1.18261407464507e-53!GO:0006412;translation;8.14114124749691e-53!GO:0031981;nuclear lumen;4.62982897598457e-52!GO:0031090;organelle membrane;1.24015559994341e-50!GO:0044429;mitochondrial part;1.29425781168513e-50!GO:0003735;structural constituent of ribosome;2.02827431664664e-50!GO:0019538;protein metabolic process;4.38613922583327e-49!GO:0031967;organelle envelope;1.85013286303564e-47!GO:0031975;envelope;5.21699666940229e-47!GO:0043228;non-membrane-bound organelle;2.46501061214903e-45!GO:0043232;intracellular non-membrane-bound organelle;2.46501061214903e-45!GO:0009058;biosynthetic process;2.80438634337485e-45!GO:0006259;DNA metabolic process;1.44372972661888e-44!GO:0016071;mRNA metabolic process;4.25633023345032e-44!GO:0033279;ribosomal subunit;9.01351413910353e-44!GO:0044260;cellular macromolecule metabolic process;1.54303779181252e-43!GO:0044267;cellular protein metabolic process;3.15038599650001e-43!GO:0008380;RNA splicing;2.54298715426354e-42!GO:0006996;organelle organization and biogenesis;3.25110055468785e-42!GO:0044249;cellular biosynthetic process;3.25110055468785e-42!GO:0015031;protein transport;2.13911613578437e-41!GO:0033036;macromolecule localization;2.88767461223344e-41!GO:0009059;macromolecule biosynthetic process;8.84366985308783e-40!GO:0005829;cytosol;3.27719201365128e-39!GO:0003676;nucleic acid binding;4.32179973398128e-39!GO:0006397;mRNA processing;1.1904803107309e-38!GO:0045184;establishment of protein localization;8.5275638182187e-38!GO:0008104;protein localization;1.87952670657244e-37!GO:0065003;macromolecular complex assembly;5.94982140488728e-37!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.02712528787363e-36!GO:0046907;intracellular transport;8.18240602008342e-36!GO:0007049;cell cycle;4.68130899444325e-35!GO:0022607;cellular component assembly;3.9718747143318e-33!GO:0005654;nucleoplasm;2.77109253687757e-32!GO:0005740;mitochondrial envelope;9.268655001959e-32!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.15529835448561e-30!GO:0006886;intracellular protein transport;4.61924306872331e-30!GO:0031966;mitochondrial membrane;1.26648309040474e-29!GO:0005681;spliceosome;1.4978866999511e-29!GO:0019866;organelle inner membrane;4.35487074008517e-29!GO:0000166;nucleotide binding;5.02872057090465e-29!GO:0022402;cell cycle process;8.88955527002759e-28!GO:0016070;RNA metabolic process;1.57398523932983e-27!GO:0000278;mitotic cell cycle;3.89445830108117e-27!GO:0006974;response to DNA damage stimulus;4.11393944227336e-27!GO:0005743;mitochondrial inner membrane;6.52433572042416e-27!GO:0044451;nucleoplasm part;8.70191967207831e-26!GO:0005694;chromosome;1.71932191912741e-25!GO:0044445;cytosolic part;2.57485340721599e-24!GO:0031980;mitochondrial lumen;2.47413939836544e-23!GO:0005759;mitochondrial matrix;2.47413939836544e-23!GO:0015934;large ribosomal subunit;2.93486289364061e-23!GO:0044427;chromosomal part;3.45235742598791e-23!GO:0051649;establishment of cellular localization;7.51689260344795e-23!GO:0016462;pyrophosphatase activity;8.07333011415681e-23!GO:0051641;cellular localization;8.97248198887628e-23!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.20584320894651e-22!GO:0022403;cell cycle phase;1.22363907855677e-22!GO:0006281;DNA repair;1.25907556424181e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;2.00460218118381e-22!GO:0006119;oxidative phosphorylation;2.12081379512821e-22!GO:0000087;M phase of mitotic cell cycle;4.84361819411753e-22!GO:0017111;nucleoside-triphosphatase activity;5.53735513113783e-22!GO:0015935;small ribosomal subunit;1.15019816084251e-21!GO:0007067;mitosis;1.27161230222933e-21!GO:0044455;mitochondrial membrane part;1.55572357146773e-21!GO:0012505;endomembrane system;1.80086018002825e-21!GO:0006457;protein folding;8.57191127141282e-21!GO:0005730;nucleolus;1.34693704420207e-20!GO:0017076;purine nucleotide binding;5.84332374466543e-20!GO:0016874;ligase activity;6.03049988704471e-20!GO:0032553;ribonucleotide binding;1.469867719182e-19!GO:0032555;purine ribonucleotide binding;1.469867719182e-19!GO:0051276;chromosome organization and biogenesis;2.02347248903847e-19!GO:0051301;cell division;2.33598732377171e-19!GO:0022618;protein-RNA complex assembly;2.7839377051231e-19!GO:0000279;M phase;3.67855915441332e-19!GO:0009719;response to endogenous stimulus;4.21574011589358e-19!GO:0006512;ubiquitin cycle;2.36713858759346e-18!GO:0048770;pigment granule;3.48760148264602e-18!GO:0042470;melanosome;3.48760148264602e-18!GO:0006260;DNA replication;4.39502123909084e-18!GO:0005746;mitochondrial respiratory chain;7.52345987572765e-18!GO:0042254;ribosome biogenesis and assembly;1.25567683789805e-17!GO:0005761;mitochondrial ribosome;1.68442574572007e-17!GO:0000313;organellar ribosome;1.68442574572007e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;1.75955298006184e-17!GO:0044265;cellular macromolecule catabolic process;1.96394267722742e-17!GO:0005524;ATP binding;2.27389850780559e-17!GO:0043285;biopolymer catabolic process;2.27389850780559e-17!GO:0006511;ubiquitin-dependent protein catabolic process;2.39233110137225e-17!GO:0019941;modification-dependent protein catabolic process;2.63323881916513e-17!GO:0043632;modification-dependent macromolecule catabolic process;2.63323881916513e-17!GO:0030554;adenyl nucleotide binding;3.72560736524685e-17!GO:0008135;translation factor activity, nucleic acid binding;5.22050860442704e-17!GO:0044257;cellular protein catabolic process;6.175323035326e-17!GO:0032559;adenyl ribonucleotide binding;6.31079761306416e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.59582340416672e-17!GO:0051186;cofactor metabolic process;1.17560358667787e-16!GO:0005635;nuclear envelope;2.33862230003908e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.63237646494605e-16!GO:0050136;NADH dehydrogenase (quinone) activity;5.63237646494605e-16!GO:0003954;NADH dehydrogenase activity;5.63237646494605e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.63237646494605e-16!GO:0009057;macromolecule catabolic process;7.0917558568285e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;9.41751483119647e-16!GO:0000375;RNA splicing, via transesterification reactions;9.41751483119647e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.41751483119647e-16!GO:0005783;endoplasmic reticulum;1.16277079673772e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.29267366540435e-15!GO:0030163;protein catabolic process;2.09382874425396e-15!GO:0031965;nuclear membrane;3.06348474560075e-15!GO:0006605;protein targeting;3.17809228979333e-15!GO:0044453;nuclear membrane part;5.08231902712609e-15!GO:0006325;establishment and/or maintenance of chromatin architecture;6.63032755876951e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);9.2029578286496e-15!GO:0044432;endoplasmic reticulum part;1.5252362675697e-14!GO:0008134;transcription factor binding;2.10454395005412e-14!GO:0042775;organelle ATP synthesis coupled electron transport;2.15959850757597e-14!GO:0042773;ATP synthesis coupled electron transport;2.15959850757597e-14!GO:0006323;DNA packaging;2.76549203283377e-14!GO:0030964;NADH dehydrogenase complex (quinone);3.03584707998499e-14!GO:0045271;respiratory chain complex I;3.03584707998499e-14!GO:0005747;mitochondrial respiratory chain complex I;3.03584707998499e-14!GO:0044248;cellular catabolic process;3.05148682421285e-14!GO:0043412;biopolymer modification;6.57644354324186e-14!GO:0006399;tRNA metabolic process;6.65143700994908e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.27610102568624e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.07781450868453e-13!GO:0003743;translation initiation factor activity;2.13812609528178e-13!GO:0005794;Golgi apparatus;2.38877601676479e-13!GO:0051082;unfolded protein binding;2.74739480023275e-13!GO:0048193;Golgi vesicle transport;2.89332794557414e-13!GO:0000074;regulation of progression through cell cycle;6.49389275408276e-13!GO:0051726;regulation of cell cycle;7.21758915229721e-13!GO:0006732;coenzyme metabolic process;7.83682841593594e-13!GO:0016604;nuclear body;1.17427601512334e-12!GO:0065004;protein-DNA complex assembly;1.48207343536672e-12!GO:0005643;nuclear pore;1.88917284293022e-12!GO:0000785;chromatin;3.29298470956626e-12!GO:0009055;electron carrier activity;4.04599438262355e-12!GO:0006413;translational initiation;4.57664753514421e-12!GO:0016887;ATPase activity;4.94325079582864e-12!GO:0006333;chromatin assembly or disassembly;5.32177899200826e-12!GO:0006464;protein modification process;5.52088861048585e-12!GO:0015630;microtubule cytoskeleton;1.0428344782026e-11!GO:0006364;rRNA processing;1.1154018221846e-11!GO:0042623;ATPase activity, coupled;1.18693439129382e-11!GO:0005793;ER-Golgi intermediate compartment;1.37914457794002e-11!GO:0006913;nucleocytoplasmic transport;1.58485552270358e-11!GO:0004386;helicase activity;2.36617370953654e-11!GO:0016072;rRNA metabolic process;3.19192280089088e-11!GO:0051169;nuclear transport;4.15968786605244e-11!GO:0009259;ribonucleotide metabolic process;4.16342489517557e-11!GO:0006446;regulation of translational initiation;6.81090885172124e-11!GO:0006163;purine nucleotide metabolic process;8.72259730290902e-11!GO:0046930;pore complex;1.13034351717735e-10!GO:0065002;intracellular protein transport across a membrane;1.1758908389262e-10!GO:0043687;post-translational protein modification;1.4455615060092e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.45751190606445e-10!GO:0006403;RNA localization;1.65203885715173e-10!GO:0050657;nucleic acid transport;1.65969894596722e-10!GO:0051236;establishment of RNA localization;1.65969894596722e-10!GO:0050658;RNA transport;1.65969894596722e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.24990243382823e-10!GO:0004812;aminoacyl-tRNA ligase activity;2.24990243382823e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.24990243382823e-10!GO:0050794;regulation of cellular process;2.81937652082435e-10!GO:0006334;nucleosome assembly;2.8764359778071e-10!GO:0016607;nuclear speck;3.0961487530672e-10!GO:0005789;endoplasmic reticulum membrane;4.4844984997391e-10!GO:0009150;purine ribonucleotide metabolic process;4.65230128143573e-10!GO:0043038;amino acid activation;4.88807232456503e-10!GO:0006418;tRNA aminoacylation for protein translation;4.88807232456503e-10!GO:0043039;tRNA aminoacylation;4.88807232456503e-10!GO:0016192;vesicle-mediated transport;6.58424072657073e-10!GO:0006164;purine nucleotide biosynthetic process;8.23446920746583e-10!GO:0008026;ATP-dependent helicase activity;1.00050972703952e-09!GO:0003697;single-stranded DNA binding;1.04860233802921e-09!GO:0008565;protein transporter activity;1.0500199268321e-09!GO:0031497;chromatin assembly;1.05940192811185e-09!GO:0006461;protein complex assembly;1.06379466163073e-09!GO:0009260;ribonucleotide biosynthetic process;1.07320169457981e-09!GO:0000775;chromosome, pericentric region;1.15466046220878e-09!GO:0008639;small protein conjugating enzyme activity;1.86854117084855e-09!GO:0005819;spindle;2.03830151527146e-09!GO:0030532;small nuclear ribonucleoprotein complex;2.05753720011107e-09!GO:0043566;structure-specific DNA binding;2.26592919760575e-09!GO:0009060;aerobic respiration;2.37295298122739e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.55236011868508e-09!GO:0003712;transcription cofactor activity;3.04959097951145e-09!GO:0006366;transcription from RNA polymerase II promoter;3.5394372725854e-09!GO:0005813;centrosome;3.68052254738553e-09!GO:0004842;ubiquitin-protein ligase activity;4.11912497583346e-09!GO:0009152;purine ribonucleotide biosynthetic process;4.35418988943887e-09!GO:0009199;ribonucleoside triphosphate metabolic process;4.61243032547724e-09!GO:0006261;DNA-dependent DNA replication;5.09970996580175e-09!GO:0045333;cellular respiration;5.41627267723228e-09!GO:0009141;nucleoside triphosphate metabolic process;5.80447094460594e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.39177204382346e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;7.57281782894504e-09!GO:0017038;protein import;7.78086703521752e-09!GO:0016779;nucleotidyltransferase activity;9.52912975813085e-09!GO:0051028;mRNA transport;9.60711059136976e-09!GO:0019787;small conjugating protein ligase activity;9.87784498355448e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;9.96831443634124e-09!GO:0009144;purine nucleoside triphosphate metabolic process;9.96831443634124e-09!GO:0005815;microtubule organizing center;1.2460232353133e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.35647449292273e-08!GO:0051188;cofactor biosynthetic process;1.62033468848586e-08!GO:0012501;programmed cell death;1.83985728688759e-08!GO:0009056;catabolic process;1.89999033087474e-08!GO:0016740;transferase activity;2.09864749660338e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.13957744868747e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.34821844781849e-08!GO:0006915;apoptosis;2.59087166894412e-08!GO:0006099;tricarboxylic acid cycle;5.10865443539061e-08!GO:0046356;acetyl-CoA catabolic process;5.10865443539061e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.07739943475558e-08!GO:0051329;interphase of mitotic cell cycle;7.13406140415477e-08!GO:0005667;transcription factor complex;8.03304159762402e-08!GO:0007005;mitochondrion organization and biogenesis;8.0510607067434e-08!GO:0009142;nucleoside triphosphate biosynthetic process;9.56070725926734e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.56070725926734e-08!GO:0016881;acid-amino acid ligase activity;1.0276593237609e-07!GO:0046034;ATP metabolic process;1.16046904714787e-07!GO:0009109;coenzyme catabolic process;1.25716029035262e-07!GO:0006084;acetyl-CoA metabolic process;1.38667814690228e-07!GO:0030120;vesicle coat;1.57760316616233e-07!GO:0030662;coated vesicle membrane;1.57760316616233e-07!GO:0015986;ATP synthesis coupled proton transport;1.58020665535805e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.58020665535805e-07!GO:0051325;interphase;1.65891568398432e-07!GO:0005657;replication fork;1.66602920154582e-07!GO:0007051;spindle organization and biogenesis;1.67430274092489e-07!GO:0003924;GTPase activity;1.71349839256014e-07!GO:0019222;regulation of metabolic process;2.05589921490989e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.08379990692034e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.08379990692034e-07!GO:0008219;cell death;2.14223874332209e-07!GO:0016265;death;2.14223874332209e-07!GO:0016568;chromatin modification;2.2072495408815e-07!GO:0009117;nucleotide metabolic process;2.26078708172449e-07!GO:0048523;negative regulation of cellular process;2.28739952367541e-07!GO:0051187;cofactor catabolic process;2.54655198305053e-07!GO:0003899;DNA-directed RNA polymerase activity;2.77072596049027e-07!GO:0000075;cell cycle checkpoint;4.14502897173627e-07!GO:0000245;spliceosome assembly;4.30010768212854e-07!GO:0048475;coated membrane;4.56275986778728e-07!GO:0030117;membrane coat;4.56275986778728e-07!GO:0019829;cation-transporting ATPase activity;4.71422093410913e-07!GO:0008094;DNA-dependent ATPase activity;5.23052667418698e-07!GO:0032446;protein modification by small protein conjugation;8.47063439224235e-07!GO:0045259;proton-transporting ATP synthase complex;9.92241584134604e-07!GO:0005788;endoplasmic reticulum lumen;1.13112533791451e-06!GO:0044431;Golgi apparatus part;1.13138070432329e-06!GO:0009108;coenzyme biosynthetic process;1.15072460257689e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.25154565102437e-06!GO:0005762;mitochondrial large ribosomal subunit;1.2902585083503e-06!GO:0000315;organellar large ribosomal subunit;1.2902585083503e-06!GO:0016491;oxidoreductase activity;1.35879711559677e-06!GO:0016567;protein ubiquitination;1.5785930713935e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.73143775597671e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.91571651604733e-06!GO:0016853;isomerase activity;2.03709052688519e-06!GO:0051246;regulation of protein metabolic process;2.28906057518286e-06!GO:0006754;ATP biosynthetic process;2.30482541817753e-06!GO:0006753;nucleoside phosphate metabolic process;2.30482541817753e-06!GO:0051170;nuclear import;2.30482541817753e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;2.39710634262303e-06!GO:0043623;cellular protein complex assembly;2.64110737479931e-06!GO:0050789;regulation of biological process;2.72030658020262e-06!GO:0006752;group transfer coenzyme metabolic process;3.52731649221578e-06!GO:0016859;cis-trans isomerase activity;3.6312262964333e-06!GO:0005768;endosome;4.05121567602062e-06!GO:0006793;phosphorus metabolic process;4.43715976806113e-06!GO:0006796;phosphate metabolic process;4.43715976806113e-06!GO:0000151;ubiquitin ligase complex;4.51828151938995e-06!GO:0006606;protein import into nucleus;5.28289162367842e-06!GO:0016126;sterol biosynthetic process;5.36540242312512e-06!GO:0000786;nucleosome;5.57590991148726e-06!GO:0008654;phospholipid biosynthetic process;6.02366674715508e-06!GO:0005839;proteasome core complex (sensu Eukaryota);7.22708312778211e-06!GO:0045454;cell redox homeostasis;7.28218981751586e-06!GO:0006613;cotranslational protein targeting to membrane;7.82044270988875e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;7.82044270988875e-06!GO:0006091;generation of precursor metabolites and energy;8.0521327986526e-06!GO:0048519;negative regulation of biological process;8.77393890434498e-06!GO:0000314;organellar small ribosomal subunit;9.63323647357772e-06!GO:0005763;mitochondrial small ribosomal subunit;9.63323647357772e-06!GO:0031324;negative regulation of cellular metabolic process;1.15979558034162e-05!GO:0016787;hydrolase activity;1.2844290830087e-05!GO:0003724;RNA helicase activity;1.45130147891427e-05!GO:0006302;double-strand break repair;1.63204913189704e-05!GO:0007010;cytoskeleton organization and biogenesis;1.76982109571726e-05!GO:0006310;DNA recombination;2.08146037430314e-05!GO:0008033;tRNA processing;2.10228312004353e-05!GO:0045786;negative regulation of progression through cell cycle;2.10228312004353e-05!GO:0044440;endosomal part;2.11980954961901e-05!GO:0010008;endosome membrane;2.11980954961901e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.21046076107369e-05!GO:0000139;Golgi membrane;2.24448831467078e-05!GO:0005525;GTP binding;2.33367341641734e-05!GO:0006916;anti-apoptosis;2.67098160435938e-05!GO:0005798;Golgi-associated vesicle;2.70438561816771e-05!GO:0043021;ribonucleoprotein binding;2.83219564950803e-05!GO:0031252;leading edge;2.8613303115823e-05!GO:0051427;hormone receptor binding;2.88140004539422e-05!GO:0016563;transcription activator activity;3.03687652944592e-05!GO:0031323;regulation of cellular metabolic process;3.1615990169708e-05!GO:0003684;damaged DNA binding;3.76547706139592e-05!GO:0004298;threonine endopeptidase activity;3.76705789410615e-05!GO:0007059;chromosome segregation;4.13770966204307e-05!GO:0016310;phosphorylation;4.36479774513776e-05!GO:0015980;energy derivation by oxidation of organic compounds;4.51356680746853e-05!GO:0000776;kinetochore;4.7786932743422e-05!GO:0006350;transcription;4.98704345700245e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.26538696703674e-05!GO:0035257;nuclear hormone receptor binding;6.41658048213264e-05!GO:0016741;transferase activity, transferring one-carbon groups;6.78276075857616e-05!GO:0008168;methyltransferase activity;7.00449856444597e-05!GO:0030867;rough endoplasmic reticulum membrane;7.39929678486867e-05!GO:0003713;transcription coactivator activity;7.49161030411006e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;7.85031577854447e-05!GO:0051052;regulation of DNA metabolic process;8.32559859977218e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;8.77845783354591e-05!GO:0016564;transcription repressor activity;8.99103238894773e-05!GO:0019899;enzyme binding;9.10832691492273e-05!GO:0031988;membrane-bound vesicle;9.97371971549766e-05!GO:0016023;cytoplasmic membrane-bound vesicle;0.00010458813335855!GO:0016363;nuclear matrix;0.000108982112112002!GO:0031968;organelle outer membrane;0.000110109232544118!GO:0009892;negative regulation of metabolic process;0.00011243167128041!GO:0000059;protein import into nucleus, docking;0.000113801503225068!GO:0006383;transcription from RNA polymerase III promoter;0.00011662189210118!GO:0042981;regulation of apoptosis;0.000123234746547384!GO:0043069;negative regulation of programmed cell death;0.000124305241757711!GO:0019867;outer membrane;0.000126354643898393!GO:0003714;transcription corepressor activity;0.000137586861774507!GO:0007088;regulation of mitosis;0.00015049944200848!GO:0051168;nuclear export;0.00015049944200848!GO:0043066;negative regulation of apoptosis;0.000151406520060286!GO:0043067;regulation of programmed cell death;0.000153744305909892!GO:0005048;signal sequence binding;0.00016119089688!GO:0006626;protein targeting to mitochondrion;0.000164027001899029!GO:0005874;microtubule;0.000164027001899029!GO:0006695;cholesterol biosynthetic process;0.000174063991269726!GO:0046474;glycerophospholipid biosynthetic process;0.000175324443925765!GO:0005791;rough endoplasmic reticulum;0.000176297325627142!GO:0044452;nucleolar part;0.000179531708745563!GO:0016481;negative regulation of transcription;0.000196324820361528!GO:0005770;late endosome;0.000197123344791731!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000200441974306902!GO:0005905;coated pit;0.000200823420161447!GO:0032561;guanyl ribonucleotide binding;0.000201430756048885!GO:0019001;guanyl nucleotide binding;0.000201430756048885!GO:0003682;chromatin binding;0.00020624020335442!GO:0007052;mitotic spindle organization and biogenesis;0.000206289679964067!GO:0007093;mitotic cell cycle checkpoint;0.000214511307119062!GO:0005769;early endosome;0.00023181774667761!GO:0030880;RNA polymerase complex;0.000233645487887004!GO:0003678;DNA helicase activity;0.000240308471086217!GO:0003690;double-stranded DNA binding;0.000265609501011176!GO:0043681;protein import into mitochondrion;0.000276798177615139!GO:0006612;protein targeting to membrane;0.000294983487273191!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000300206094909906!GO:0004527;exonuclease activity;0.000350467256431592!GO:0009165;nucleotide biosynthetic process;0.000373307942212456!GO:0051252;regulation of RNA metabolic process;0.000375720836086354!GO:0004576;oligosaccharyl transferase activity;0.000375720836086354!GO:0008610;lipid biosynthetic process;0.000385473200845709!GO:0031982;vesicle;0.000394993975632092!GO:0008250;oligosaccharyl transferase complex;0.000412668705764201!GO:0005885;Arp2/3 protein complex;0.000418349518736116!GO:0006414;translational elongation;0.00042363805549052!GO:0003729;mRNA binding;0.000429560387805609!GO:0031410;cytoplasmic vesicle;0.000461100609631855!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.000467900236530042!GO:0010468;regulation of gene expression;0.000467900236530042!GO:0007017;microtubule-based process;0.00047635499944091!GO:0033116;ER-Golgi intermediate compartment membrane;0.000497801480424499!GO:0051540;metal cluster binding;0.000507086839087223!GO:0051536;iron-sulfur cluster binding;0.000507086839087223!GO:0005741;mitochondrial outer membrane;0.000522671356036561!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000542490170738966!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000563891369169519!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000564469770338226!GO:0000428;DNA-directed RNA polymerase complex;0.000564469770338226!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000581280681905013!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000584847734397483!GO:0008186;RNA-dependent ATPase activity;0.000623012641217865!GO:0042802;identical protein binding;0.000703354638894966!GO:0005684;U2-dependent spliceosome;0.000728211562218714!GO:0030663;COPI coated vesicle membrane;0.000758873270633823!GO:0030126;COPI vesicle coat;0.000758873270633823!GO:0019843;rRNA binding;0.000785959519467082!GO:0000082;G1/S transition of mitotic cell cycle;0.000797046778270627!GO:0006839;mitochondrial transport;0.000807055772206962!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.000830769575410828!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000833261823639471!GO:0003677;DNA binding;0.000833512452849256!GO:0000049;tRNA binding;0.00085286734098949!GO:0051920;peroxiredoxin activity;0.000881310894075723!GO:0051789;response to protein stimulus;0.00090876148999564!GO:0006986;response to unfolded protein;0.00090876148999564!GO:0046467;membrane lipid biosynthetic process;0.000995105509776994!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000995105509776994!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000995105509776994!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000995105509776994!GO:0000922;spindle pole;0.00106071893679!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0010778211656138!GO:0030036;actin cytoskeleton organization and biogenesis;0.00111650480762705!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0011210892544429!GO:0007006;mitochondrial membrane organization and biogenesis;0.0011356286793182!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.00114597273415969!GO:0050662;coenzyme binding;0.00114850181262552!GO:0005876;spindle microtubule;0.00116756334684189!GO:0048500;signal recognition particle;0.00128565468983207!GO:0031072;heat shock protein binding;0.00132865449695287!GO:0006352;transcription initiation;0.0014397039806606!GO:0048471;perinuclear region of cytoplasm;0.0014906345768557!GO:0006402;mRNA catabolic process;0.0014906345768557!GO:0018196;peptidyl-asparagine modification;0.0014906345768557!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0014906345768557!GO:0015631;tubulin binding;0.00153715270742637!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.00156823680832144!GO:0051287;NAD binding;0.00160891845370295!GO:0004004;ATP-dependent RNA helicase activity;0.00164906418206302!GO:0006275;regulation of DNA replication;0.00171614838979488!GO:0006891;intra-Golgi vesicle-mediated transport;0.00173463789200512!GO:0008312;7S RNA binding;0.00175084795459534!GO:0006289;nucleotide-excision repair;0.00175210078090335!GO:0032508;DNA duplex unwinding;0.00177191051906738!GO:0032392;DNA geometric change;0.00177191051906738!GO:0030133;transport vesicle;0.001953146630572!GO:0030521;androgen receptor signaling pathway;0.00197196553453944!GO:0000910;cytokinesis;0.00199558999424655!GO:0046489;phosphoinositide biosynthetic process;0.00207225264560738!GO:0009112;nucleobase metabolic process;0.00210173321399599!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00211348029695463!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00211348029695463!GO:0030137;COPI-coated vesicle;0.00213545623361882!GO:0009116;nucleoside metabolic process;0.00225815546895844!GO:0032774;RNA biosynthetic process;0.00225930738222248!GO:0000228;nuclear chromosome;0.00225930738222248!GO:0004518;nuclease activity;0.00228085253693018!GO:0043284;biopolymer biosynthetic process;0.00228085253693018!GO:0019752;carboxylic acid metabolic process;0.00228085253693018!GO:0008139;nuclear localization sequence binding;0.00230681272505039!GO:0035258;steroid hormone receptor binding;0.00238484505052764!GO:0043488;regulation of mRNA stability;0.00238577051641644!GO:0043487;regulation of RNA stability;0.00238577051641644!GO:0006220;pyrimidine nucleotide metabolic process;0.00239675775265518!GO:0006082;organic acid metabolic process;0.00240462552028498!GO:0043596;nuclear replication fork;0.00241907651919406!GO:0008180;signalosome;0.00244225616745298!GO:0006268;DNA unwinding during replication;0.00275990958972088!GO:0051087;chaperone binding;0.00284500102430038!GO:0006351;transcription, DNA-dependent;0.00295363385435169!GO:0008361;regulation of cell size;0.00309296174037251!GO:0007050;cell cycle arrest;0.00309714266028076!GO:0006401;RNA catabolic process;0.00309714266028076!GO:0031570;DNA integrity checkpoint;0.00314547474821316!GO:0046483;heterocycle metabolic process;0.00314547474821316!GO:0051539;4 iron, 4 sulfur cluster binding;0.0031479457024215!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00317438299970987!GO:0045047;protein targeting to ER;0.00317438299970987!GO:0030658;transport vesicle membrane;0.00327412744873255!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.0033429777246255!GO:0005637;nuclear inner membrane;0.00337505394676232!GO:0042770;DNA damage response, signal transduction;0.00341885233678531!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00348497526072521!GO:0016049;cell growth;0.00362379048919951!GO:0006520;amino acid metabolic process;0.00372843797752063!GO:0006595;polyamine metabolic process;0.00412839999276258!GO:0004674;protein serine/threonine kinase activity;0.0041930049397819!GO:0048037;cofactor binding;0.00421505535126702!GO:0006650;glycerophospholipid metabolic process;0.00432836371821249!GO:0031124;mRNA 3'-end processing;0.00441623645503179!GO:0032984;macromolecular complex disassembly;0.00441858865988195!GO:0030134;ER to Golgi transport vesicle;0.00443440019674159!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00449139287853934!GO:0005096;GTPase activator activity;0.00457938597543346!GO:0000725;recombinational repair;0.00465408144866099!GO:0000724;double-strand break repair via homologous recombination;0.00465408144866099!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00489619020370866!GO:0030132;clathrin coat of coated pit;0.00515570829140208!GO:0004003;ATP-dependent DNA helicase activity;0.00525121620257087!GO:0017166;vinculin binding;0.00525352502682226!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00528599587547381!GO:0065007;biological regulation;0.0053012433865056!GO:0031901;early endosome membrane;0.00530309719839768!GO:0030029;actin filament-based process;0.00544087458791471!GO:0030118;clathrin coat;0.00545561444336175!GO:0016251;general RNA polymerase II transcription factor activity;0.00584856455890068!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.00597887410245527!GO:0001726;ruffle;0.00603805511999543!GO:0030127;COPII vesicle coat;0.00618857772732533!GO:0012507;ER to Golgi transport vesicle membrane;0.00618857772732533!GO:0008047;enzyme activator activity;0.00631416926035708!GO:0006144;purine base metabolic process;0.00638339469309683!GO:0019206;nucleoside kinase activity;0.00642528035684434!GO:0003711;transcription elongation regulator activity;0.00646276460254688!GO:0006284;base-excision repair;0.0069395417154595!GO:0030176;integral to endoplasmic reticulum membrane;0.00703109691858282!GO:0045449;regulation of transcription;0.00724203322959556!GO:0006405;RNA export from nucleus;0.00724203322959556!GO:0043624;cellular protein complex disassembly;0.00727282216256421!GO:0003746;translation elongation factor activity;0.00731561459398443!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00740147299422088!GO:0043241;protein complex disassembly;0.00740147299422088!GO:0006611;protein export from nucleus;0.00749274456116085!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00803121455477794!GO:0032200;telomere organization and biogenesis;0.00829769526067756!GO:0000723;telomere maintenance;0.00829769526067756!GO:0005832;chaperonin-containing T-complex;0.00830280919448193!GO:0042393;histone binding;0.00830985090838255!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00831798478520679!GO:0000339;RNA cap binding;0.00850973555303367!GO:0043601;nuclear replisome;0.00850973555303367!GO:0030894;replisome;0.00850973555303367!GO:0016408;C-acyltransferase activity;0.00854292135769377!GO:0043022;ribosome binding;0.00854800461431355!GO:0016272;prefoldin complex;0.00867435513242836!GO:0008652;amino acid biosynthetic process;0.00867821361183391!GO:0000792;heterochromatin;0.00900676871502689!GO:0005758;mitochondrial intermembrane space;0.00902717109188294!GO:0030660;Golgi-associated vesicle membrane;0.00918237131908847!GO:0000287;magnesium ion binding;0.00949194196523271!GO:0001558;regulation of cell growth;0.009773551595779!GO:0016407;acetyltransferase activity;0.0102176885000322!GO:0005100;Rho GTPase activator activity;0.0102327141366584!GO:0000077;DNA damage checkpoint;0.0103562552391478!GO:0048522;positive regulation of cellular process;0.0107330862315157!GO:0030027;lamellipodium;0.0108531973699999!GO:0009451;RNA modification;0.0110324430378563!GO:0000096;sulfur amino acid metabolic process;0.011620275293041!GO:0000819;sister chromatid segregation;0.0116580078367051!GO:0019783;small conjugating protein-specific protease activity;0.0116751115313575!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0119060148850984!GO:0015002;heme-copper terminal oxidase activity;0.0119060148850984!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0119060148850984!GO:0004129;cytochrome-c oxidase activity;0.0119060148850984!GO:0000070;mitotic sister chromatid segregation;0.0119828266569734!GO:0006270;DNA replication initiation;0.0121460433373854!GO:0007021;tubulin folding;0.0124071295225255!GO:0031970;organelle envelope lumen;0.0124615534928258!GO:0006740;NADPH regeneration;0.012582769262876!GO:0006098;pentose-phosphate shunt;0.012582769262876!GO:0050681;androgen receptor binding;0.012582769262876!GO:0000178;exosome (RNase complex);0.0126790412455715!GO:0005869;dynactin complex;0.013105476291813!GO:0016125;sterol metabolic process;0.013260138692834!GO:0006497;protein amino acid lipidation;0.013260138692834!GO:0044262;cellular carbohydrate metabolic process;0.0132634293748426!GO:0004843;ubiquitin-specific protease activity;0.0135086042793085!GO:0045892;negative regulation of transcription, DNA-dependent;0.0135086042793085!GO:0008092;cytoskeletal protein binding;0.0139866228059639!GO:0008022;protein C-terminus binding;0.0140264221849617!GO:0022411;cellular component disassembly;0.0140285897778033!GO:0007346;regulation of progression through mitotic cell cycle;0.0140285897778033!GO:0008234;cysteine-type peptidase activity;0.0141628181204879!GO:0006506;GPI anchor biosynthetic process;0.0141628181204879!GO:0005669;transcription factor TFIID complex;0.0142041719248307!GO:0030384;phosphoinositide metabolic process;0.014412517641275!GO:0006950;response to stress;0.0144818591176231!GO:0009303;rRNA transcription;0.0145838678678899!GO:0030145;manganese ion binding;0.0147762369187629!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0149578050015185!GO:0000152;nuclear ubiquitin ligase complex;0.0150398127919046!GO:0016584;nucleosome positioning;0.0150475205853411!GO:0031123;RNA 3'-end processing;0.0150855031298089!GO:0006338;chromatin remodeling;0.0152707996973071!GO:0030518;steroid hormone receptor signaling pathway;0.0157876866098918!GO:0030032;lamellipodium biogenesis;0.0160220333023146!GO:0008299;isoprenoid biosynthetic process;0.0161160372461909!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0161323151250207!GO:0030041;actin filament polymerization;0.0164649337984992!GO:0048487;beta-tubulin binding;0.0164649337984992!GO:0043189;H4/H2A histone acetyltransferase complex;0.0165189834350202!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0171723566965767!GO:0031625;ubiquitin protein ligase binding;0.0175253260734703!GO:0006505;GPI anchor metabolic process;0.0175848543644342!GO:0005773;vacuole;0.0175964780603948!GO:0005663;DNA replication factor C complex;0.0176341687358787!GO:0006378;mRNA polyadenylation;0.017819187233418!GO:0009262;deoxyribonucleotide metabolic process;0.017819187233418!GO:0015992;proton transport;0.0180477365076908!GO:0016044;membrane organization and biogenesis;0.0181048458068234!GO:0044454;nuclear chromosome part;0.0181128765074491!GO:0000209;protein polyubiquitination;0.0181688407960677!GO:0004177;aminopeptidase activity;0.0182431764600788!GO:0006118;electron transport;0.018588325170711!GO:0006541;glutamine metabolic process;0.0186198415299092!GO:0004221;ubiquitin thiolesterase activity;0.0187500107000285!GO:0006818;hydrogen transport;0.0188242011457801!GO:0046128;purine ribonucleoside metabolic process;0.0192194862794846!GO:0042278;purine nucleoside metabolic process;0.0192194862794846!GO:0035267;NuA4 histone acetyltransferase complex;0.0193715768620157!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.01971906158915!GO:0065009;regulation of a molecular function;0.0200850751031979!GO:0005862;muscle thin filament tropomyosin;0.0202873789247226!GO:0030496;midbody;0.0203525307488982!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0209485736130904!GO:0051053;negative regulation of DNA metabolic process;0.0211922344598662!GO:0006221;pyrimidine nucleotide biosynthetic process;0.0212840934875777!GO:0006778;porphyrin metabolic process;0.0212840934875777!GO:0033013;tetrapyrrole metabolic process;0.0212840934875777!GO:0031529;ruffle organization and biogenesis;0.0217431738361752!GO:0045941;positive regulation of transcription;0.0217431738361752!GO:0006376;mRNA splice site selection;0.0217431738361752!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0217431738361752!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0218522323071604!GO:0015399;primary active transmembrane transporter activity;0.0218522323071604!GO:0032259;methylation;0.0218522323071604!GO:0033673;negative regulation of kinase activity;0.0218522323071604!GO:0006469;negative regulation of protein kinase activity;0.0218522323071604!GO:0006607;NLS-bearing substrate import into nucleus;0.0221867504577005!GO:0046112;nucleobase biosynthetic process;0.0225509826829164!GO:0008408;3'-5' exonuclease activity;0.0227993933767351!GO:0006007;glucose catabolic process;0.0229408390512117!GO:0006779;porphyrin biosynthetic process;0.0232377435945233!GO:0033014;tetrapyrrole biosynthetic process;0.0232377435945233!GO:0000084;S phase of mitotic cell cycle;0.0232492764676858!GO:0009124;nucleoside monophosphate biosynthetic process;0.0235270241232014!GO:0009123;nucleoside monophosphate metabolic process;0.0235270241232014!GO:0004448;isocitrate dehydrogenase activity;0.0235567067943886!GO:0000781;chromosome, telomeric region;0.0236134312221509!GO:0031577;spindle checkpoint;0.0237324553833992!GO:0006509;membrane protein ectodomain proteolysis;0.023753150815678!GO:0033619;membrane protein proteolysis;0.023753150815678!GO:0030508;thiol-disulfide exchange intermediate activity;0.0237948740773424!GO:0045045;secretory pathway;0.0240992268883643!GO:0008632;apoptotic program;0.024314768671431!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0244561370169492!GO:0030119;AP-type membrane coat adaptor complex;0.025217200338578!GO:0000118;histone deacetylase complex;0.0255820541556796!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.025811385559527!GO:0051348;negative regulation of transferase activity;0.0268710093573656!GO:0048144;fibroblast proliferation;0.0268841349057977!GO:0048145;regulation of fibroblast proliferation;0.0268841349057977!GO:0048146;positive regulation of fibroblast proliferation;0.026935335531283!GO:0043414;biopolymer methylation;0.0269692198435339!GO:0030125;clathrin vesicle coat;0.0270210855375573!GO:0030665;clathrin coated vesicle membrane;0.0270210855375573!GO:0006400;tRNA modification;0.0270901033861943!GO:0051320;S phase;0.0271183592542574!GO:0007004;telomere maintenance via telomerase;0.0271733069293906!GO:0031371;ubiquitin conjugating enzyme complex;0.0272275961694424!GO:0003756;protein disulfide isomerase activity;0.0273949971388299!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0273949971388299!GO:0030659;cytoplasmic vesicle membrane;0.0274475615895528!GO:0004532;exoribonuclease activity;0.0275289850325338!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0275289850325338!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0276815363696613!GO:0010257;NADH dehydrogenase complex assembly;0.0276815363696613!GO:0033108;mitochondrial respiratory chain complex assembly;0.0276815363696613!GO:0022890;inorganic cation transmembrane transporter activity;0.0276831785543945!GO:0051128;regulation of cellular component organization and biogenesis;0.0281719047726354!GO:0016790;thiolester hydrolase activity;0.0281719047726354!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.029031204833798!GO:0009119;ribonucleoside metabolic process;0.0292867910968225!GO:0000123;histone acetyltransferase complex;0.0292867910968225!GO:0030833;regulation of actin filament polymerization;0.0293057669275656!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0294481253863976!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0294481253863976!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0302394957736888!GO:0016197;endosome transport;0.0304360664090764!GO:0004523;ribonuclease H activity;0.03067344980779!GO:0044450;microtubule organizing center part;0.0307613506677031!GO:0045893;positive regulation of transcription, DNA-dependent;0.0309974721929703!GO:0000323;lytic vacuole;0.0311235787942934!GO:0005764;lysosome;0.0311235787942934!GO:0042158;lipoprotein biosynthetic process;0.0314747089691657!GO:0051537;2 iron, 2 sulfur cluster binding;0.0321293623606985!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0324280263569737!GO:0030911;TPR domain binding;0.0332431502118317!GO:0047485;protein N-terminus binding;0.0334621434758832!GO:0017134;fibroblast growth factor binding;0.0338273253715358!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0344101742257716!GO:0003887;DNA-directed DNA polymerase activity;0.0345095642357203!GO:0000726;non-recombinational repair;0.0354286653042442!GO:0005784;translocon complex;0.0355475212673856!GO:0031902;late endosome membrane;0.0359372668889052!GO:0008276;protein methyltransferase activity;0.0360387880037804!GO:0005881;cytoplasmic microtubule;0.036262291295712!GO:0006739;NADP metabolic process;0.0365879897854975!GO:0016581;NuRD complex;0.0368617952856078!GO:0005680;anaphase-promoting complex;0.0386684034265079!GO:0008097;5S rRNA binding;0.0389639020991087!GO:0022408;negative regulation of cell-cell adhesion;0.0390013920431403!GO:0006730;one-carbon compound metabolic process;0.0392921255428983!GO:0008629;induction of apoptosis by intracellular signals;0.040056799357961!GO:0006643;membrane lipid metabolic process;0.0403761089939879!GO:0000086;G2/M transition of mitotic cell cycle;0.0406165908349728!GO:0030503;regulation of cell redox homeostasis;0.0408713339721516!GO:0003702;RNA polymerase II transcription factor activity;0.041693448798358!GO:0003985;acetyl-CoA C-acetyltransferase activity;0.0421829584609888!GO:0043130;ubiquitin binding;0.0423069212053071!GO:0032182;small conjugating protein binding;0.0423069212053071!GO:0030131;clathrin adaptor complex;0.0428305923511486!GO:0051098;regulation of binding;0.0430687914785021!GO:0000097;sulfur amino acid biosynthetic process;0.0432143237652439!GO:0050178;phenylpyruvate tautomerase activity;0.0434142855047811!GO:0006984;ER-nuclear signaling pathway;0.0434142855047811!GO:0007034;vacuolar transport;0.0434142855047811!GO:0016311;dephosphorylation;0.0434142855047811!GO:0006355;regulation of transcription, DNA-dependent;0.043623517531039!GO:0016417;S-acyltransferase activity;0.0437049388243064!GO:0000793;condensed chromosome;0.0442482414825733!GO:0030522;intracellular receptor-mediated signaling pathway;0.0456204197385905!GO:0006733;oxidoreduction coenzyme metabolic process;0.046014877454948!GO:0006367;transcription initiation from RNA polymerase II promoter;0.046014877454948!GO:0042026;protein refolding;0.0462136498641515!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0462136498641515!GO:0045039;protein import into mitochondrial inner membrane;0.0462136498641515!GO:0009161;ribonucleoside monophosphate metabolic process;0.0462976164735275!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0462976164735275!GO:0006979;response to oxidative stress;0.0464025059978828!GO:0009225;nucleotide-sugar metabolic process;0.0471681411542757!GO:0046966;thyroid hormone receptor binding;0.0471928899317372!GO:0015036;disulfide oxidoreductase activity;0.0473602876260634!GO:0008017;microtubule binding;0.047590652326947!GO:0008287;protein serine/threonine phosphatase complex;0.048476577863359!GO:0051101;regulation of DNA binding;0.0484935163967387!GO:0030031;cell projection biogenesis;0.0489399356998461!GO:0004239;methionyl aminopeptidase activity;0.049330012258568
|sample_id=11450
|sample_id=11450
|sample_note=
|sample_note=
Line 76: Line 100:
|sample_tissue=skin
|sample_tissue=skin
|top_motifs=GFI1:1.60876221053;TFDP1:1.57122860323;NKX3-1:1.32694433193;E2F1..5:1.23596829568;ALX4:1.23195864599;NKX2-2,8:1.20970737251;NFY{A,B,C}:1.20076787791;PDX1:1.19936370807;EN1,2:1.17591927955;PAX8:1.1605401392;GZF1:1.00912091909;NR3C1:1.00309778971;YY1:0.961305623334;MYB:0.826115065652;NRF1:0.814168407814;NFIX:0.808214110351;ELK1,4_GABP{A,B1}:0.798751614226;ZNF143:0.785673884976;PBX1:0.782688553435;POU1F1:0.765012244121;TOPORS:0.685360158471;SPZ1:0.577968830848;UFEwm:0.567161244598;HES1:0.560590092412;HOX{A5,B5}:0.559536084438;GFI1B:0.552905433606;SOX17:0.54544486089;RXR{A,B,G}:0.538072359138;XBP1:0.526330968065;PAX4:0.519714684256;ZNF238:0.516398445034;ZIC1..3:0.48658433384;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.486562477388;CREB1:0.479132646381;TFAP4:0.464323199182;POU2F1..3:0.439595151488;BREu{core}:0.422885147289;KLF4:0.418698944521;AHR_ARNT_ARNT2:0.388444926538;CDC5L:0.381411227537;MZF1:0.353713708683;PRRX1,2:0.343883661219;NANOG{mouse}:0.325715524209;PAX3,7:0.315346496836;NKX6-1,2:0.305787868682;TEAD1:0.280338048322;GCM1,2:0.276876739426;XCPE1{core}:0.268644937909;POU3F1..4:0.250281014298;BACH2:0.247855302987;CEBPA,B_DDIT3:0.247783107566;TBX4,5:0.244082965336;MYBL2:0.243379567497;AR:0.227285630991;HOXA9_MEIS1:0.221796993255;LEF1_TCF7_TCF7L1,2:0.213767563548;TP53:0.213641962239;FOS_FOS{B,L1}_JUN{B,D}:0.201500388778;PAX1,9:0.194911695074;HOX{A4,D4}:0.184368299821;STAT1,3:0.174289358374;NKX2-3_NKX2-5:0.169242285631;HBP1_HMGB_SSRP1_UBTF:0.161013180708;FOXQ1:0.144207065329;NFATC1..3:0.135955328325;ALX1:0.13278020702;GATA4:0.129114106889;AIRE:0.128646683992;TFAP2{A,C}:0.122734323086;NFE2L2:0.115849269683;GTF2A1,2:0.109992631721;TLX1..3_NFIC{dimer}:0.104219875565;PRDM1:0.102767025241;NR1H4:0.0893804718249;HSF1,2:0.0892914628673;PAX5:0.0821375004295;GTF2I:0.0805070813533;ATF4:0.0665718271955;CRX:0.0641798792858;NKX2-1,4:0.0588470150933;ELF1,2,4:0.0483720301006;TAL1_TCF{3,4,12}:0.0433244695232;FOXD3:0.0396869199928;HLF:0.0384024925672;SOX{8,9,10}:0.0332269803455;HNF4A_NR2F1,2:0.0267167563062;ESR1:0.0197874005243;TEF:-0.00671461307504;EVI1:-0.00788868874643;NKX3-2:-0.0134079317744;POU5F1:-0.0178838655157;ONECUT1,2:-0.0234999640181;IKZF1:-0.0273957288885;NFE2L1:-0.0354563988224;LHX3,4:-0.03663422752;FOSL2:-0.0425258083966;FOXP1:-0.0499609017413;TFAP2B:-0.0588514696377;ZFP161:-0.0610147752093;NR5A1,2:-0.0611612163419;ESRRA:-0.0692476138321;HIC1:-0.0731509895998;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.077886666371;FOX{I1,J2}:-0.079226252382;T:-0.091607812612;ATF6:-0.0933710644576;RFX1:-0.0959629880371;ZBTB16:-0.0989718896383;HNF1A:-0.106079405612;PATZ1:-0.116289268301;PITX1..3:-0.142276319716;SRF:-0.150647413358;ZBTB6:-0.165924131746;STAT5{A,B}:-0.194995766259;NFE2:-0.200074580937;TGIF1:-0.206132126481;bHLH_family:-0.207782771898;NANOG:-0.2121013858;TBP:-0.218121354625;RUNX1..3:-0.224716791808;HAND1,2:-0.251820052824;MTE{core}:-0.251825084188;EGR1..3:-0.264370625194;DMAP1_NCOR{1,2}_SMARC:-0.264448496626;RXRA_VDR{dimer}:-0.27203822293;MTF1:-0.289871806237;HIF1A:-0.293449199917;SP1:-0.296467660697;GATA6:-0.306105905633;SPI1:-0.307650766954;NFKB1_REL_RELA:-0.316805545897;ZNF384:-0.318823433448;POU6F1:-0.327609632601;MEF2{A,B,C,D}:-0.336492456659;SOX5:-0.338664120185;ADNP_IRX_SIX_ZHX:-0.345429698725;RFX2..5_RFXANK_RFXAP:-0.347583712416;ARID5B:-0.354489879145;ZNF423:-0.358230634844;MED-1{core}:-0.362052011707;ZNF148:-0.365741883561;OCT4_SOX2{dimer}:-0.369602372821;REST:-0.370964986337;HMGA1,2:-0.378894553401;SOX2:-0.397489016468;JUN:-0.401516593408;NHLH1,2:-0.403491893586;FOXM1:-0.40990381777;CUX2:-0.413765932532;EBF1:-0.424759944414;VSX1,2:-0.438645745287;ATF5_CREB3:-0.448682305706;PPARG:-0.448915285074;CDX1,2,4:-0.449168796047;IKZF2:-0.450165590016;PAX2:-0.460798045652;MAZ:-0.464692781265;TFCP2:-0.481849868429;HOX{A6,A7,B6,B7}:-0.487643533172;STAT2,4,6:-0.49523171352;SPIB:-0.497511480157;FOXA2:-0.528506795734;DBP:-0.534832278392;RBPJ:-0.535143824876;NR6A1:-0.548974882282;MYFfamily:-0.557817023546;ATF2:-0.558704177656;ETS1,2:-0.564206373121;GLI1..3:-0.569703339316;RREB1:-0.576856467781;MAFB:-0.594136316801;FOXO1,3,4:-0.603031821763;FOXP3:-0.636046246539;RORA:-0.643752069375;FOXN1:-0.648095476813;PAX6:-0.669981830731;FOXL1:-0.689728333519;BPTF:-0.69624484646;HMX1:-0.714612820005;TLX2:-0.718259248362;MYOD1:-0.73054300219;IRF7:-0.738418393554;IRF1,2:-0.758507588483;EP300:-0.761727979398;SNAI1..3:-0.784345179367;FOX{F1,F2,J1}:-0.785005628642;SMAD1..7,9:-0.802894303235;SREBF1,2:-0.842783761304;NFIL3:-0.84677293641;LMO2:-0.892731623326;ZEB1:-0.90701136869;FOX{D1,D2}:-1.17488927928
|top_motifs=GFI1:1.60876221053;TFDP1:1.57122860323;NKX3-1:1.32694433193;E2F1..5:1.23596829568;ALX4:1.23195864599;NKX2-2,8:1.20970737251;NFY{A,B,C}:1.20076787791;PDX1:1.19936370807;EN1,2:1.17591927955;PAX8:1.1605401392;GZF1:1.00912091909;NR3C1:1.00309778971;YY1:0.961305623334;MYB:0.826115065652;NRF1:0.814168407814;NFIX:0.808214110351;ELK1,4_GABP{A,B1}:0.798751614226;ZNF143:0.785673884976;PBX1:0.782688553435;POU1F1:0.765012244121;TOPORS:0.685360158471;SPZ1:0.577968830848;UFEwm:0.567161244598;HES1:0.560590092412;HOX{A5,B5}:0.559536084438;GFI1B:0.552905433606;SOX17:0.54544486089;RXR{A,B,G}:0.538072359138;XBP1:0.526330968065;PAX4:0.519714684256;ZNF238:0.516398445034;ZIC1..3:0.48658433384;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.486562477388;CREB1:0.479132646381;TFAP4:0.464323199182;POU2F1..3:0.439595151488;BREu{core}:0.422885147289;KLF4:0.418698944521;AHR_ARNT_ARNT2:0.388444926538;CDC5L:0.381411227537;MZF1:0.353713708683;PRRX1,2:0.343883661219;NANOG{mouse}:0.325715524209;PAX3,7:0.315346496836;NKX6-1,2:0.305787868682;TEAD1:0.280338048322;GCM1,2:0.276876739426;XCPE1{core}:0.268644937909;POU3F1..4:0.250281014298;BACH2:0.247855302987;CEBPA,B_DDIT3:0.247783107566;TBX4,5:0.244082965336;MYBL2:0.243379567497;AR:0.227285630991;HOXA9_MEIS1:0.221796993255;LEF1_TCF7_TCF7L1,2:0.213767563548;TP53:0.213641962239;FOS_FOS{B,L1}_JUN{B,D}:0.201500388778;PAX1,9:0.194911695074;HOX{A4,D4}:0.184368299821;STAT1,3:0.174289358374;NKX2-3_NKX2-5:0.169242285631;HBP1_HMGB_SSRP1_UBTF:0.161013180708;FOXQ1:0.144207065329;NFATC1..3:0.135955328325;ALX1:0.13278020702;GATA4:0.129114106889;AIRE:0.128646683992;TFAP2{A,C}:0.122734323086;NFE2L2:0.115849269683;GTF2A1,2:0.109992631721;TLX1..3_NFIC{dimer}:0.104219875565;PRDM1:0.102767025241;NR1H4:0.0893804718249;HSF1,2:0.0892914628673;PAX5:0.0821375004295;GTF2I:0.0805070813533;ATF4:0.0665718271955;CRX:0.0641798792858;NKX2-1,4:0.0588470150933;ELF1,2,4:0.0483720301006;TAL1_TCF{3,4,12}:0.0433244695232;FOXD3:0.0396869199928;HLF:0.0384024925672;SOX{8,9,10}:0.0332269803455;HNF4A_NR2F1,2:0.0267167563062;ESR1:0.0197874005243;TEF:-0.00671461307504;EVI1:-0.00788868874643;NKX3-2:-0.0134079317744;POU5F1:-0.0178838655157;ONECUT1,2:-0.0234999640181;IKZF1:-0.0273957288885;NFE2L1:-0.0354563988224;LHX3,4:-0.03663422752;FOSL2:-0.0425258083966;FOXP1:-0.0499609017413;TFAP2B:-0.0588514696377;ZFP161:-0.0610147752093;NR5A1,2:-0.0611612163419;ESRRA:-0.0692476138321;HIC1:-0.0731509895998;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.077886666371;FOX{I1,J2}:-0.079226252382;T:-0.091607812612;ATF6:-0.0933710644576;RFX1:-0.0959629880371;ZBTB16:-0.0989718896383;HNF1A:-0.106079405612;PATZ1:-0.116289268301;PITX1..3:-0.142276319716;SRF:-0.150647413358;ZBTB6:-0.165924131746;STAT5{A,B}:-0.194995766259;NFE2:-0.200074580937;TGIF1:-0.206132126481;bHLH_family:-0.207782771898;NANOG:-0.2121013858;TBP:-0.218121354625;RUNX1..3:-0.224716791808;HAND1,2:-0.251820052824;MTE{core}:-0.251825084188;EGR1..3:-0.264370625194;DMAP1_NCOR{1,2}_SMARC:-0.264448496626;RXRA_VDR{dimer}:-0.27203822293;MTF1:-0.289871806237;HIF1A:-0.293449199917;SP1:-0.296467660697;GATA6:-0.306105905633;SPI1:-0.307650766954;NFKB1_REL_RELA:-0.316805545897;ZNF384:-0.318823433448;POU6F1:-0.327609632601;MEF2{A,B,C,D}:-0.336492456659;SOX5:-0.338664120185;ADNP_IRX_SIX_ZHX:-0.345429698725;RFX2..5_RFXANK_RFXAP:-0.347583712416;ARID5B:-0.354489879145;ZNF423:-0.358230634844;MED-1{core}:-0.362052011707;ZNF148:-0.365741883561;OCT4_SOX2{dimer}:-0.369602372821;REST:-0.370964986337;HMGA1,2:-0.378894553401;SOX2:-0.397489016468;JUN:-0.401516593408;NHLH1,2:-0.403491893586;FOXM1:-0.40990381777;CUX2:-0.413765932532;EBF1:-0.424759944414;VSX1,2:-0.438645745287;ATF5_CREB3:-0.448682305706;PPARG:-0.448915285074;CDX1,2,4:-0.449168796047;IKZF2:-0.450165590016;PAX2:-0.460798045652;MAZ:-0.464692781265;TFCP2:-0.481849868429;HOX{A6,A7,B6,B7}:-0.487643533172;STAT2,4,6:-0.49523171352;SPIB:-0.497511480157;FOXA2:-0.528506795734;DBP:-0.534832278392;RBPJ:-0.535143824876;NR6A1:-0.548974882282;MYFfamily:-0.557817023546;ATF2:-0.558704177656;ETS1,2:-0.564206373121;GLI1..3:-0.569703339316;RREB1:-0.576856467781;MAFB:-0.594136316801;FOXO1,3,4:-0.603031821763;FOXP3:-0.636046246539;RORA:-0.643752069375;FOXN1:-0.648095476813;PAX6:-0.669981830731;FOXL1:-0.689728333519;BPTF:-0.69624484646;HMX1:-0.714612820005;TLX2:-0.718259248362;MYOD1:-0.73054300219;IRF7:-0.738418393554;IRF1,2:-0.758507588483;EP300:-0.761727979398;SNAI1..3:-0.784345179367;FOX{F1,F2,J1}:-0.785005628642;SMAD1..7,9:-0.802894303235;SREBF1,2:-0.842783761304;NFIL3:-0.84677293641;LMO2:-0.892731623326;ZEB1:-0.90701136869;FOX{D1,D2}:-1.17488927928
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11450-119A1;search_select_hide=table117:FF:11450-119A1
}}
}}

Latest revision as of 18:01, 4 June 2020

Name:Fibroblast - Dermal, donor4
Species:Human (Homo sapiens)
Library ID:CNhs12052
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueskin
dev stagefetus
sexunknown
agefetal
cell typefibroblast
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number243
catalog numberSC2305
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005148
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12052 CAGE DRX008257 DRR009129
Accession ID Hg19

Library idBAMCTSS
CNhs12052 DRZ000554 DRZ001939
Accession ID Hg38

Library idBAMCTSS
CNhs12052 DRZ011904 DRZ013289
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.167
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.569
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0191
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.095
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.395
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140.0482
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.382
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.235
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.261
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.845
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory-0.00667
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.525
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.0916
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.0482
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.0482
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.422
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.0916
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.411
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12052

Jaspar motifP-value
MA0002.20.0253
MA0003.10.353
MA0004.10.973
MA0006.10.752
MA0007.10.51
MA0009.10.106
MA0014.10.979
MA0017.10.127
MA0018.20.537
MA0019.10.44
MA0024.11.26329e-8
MA0025.10.505
MA0027.10.68
MA0028.13.37062e-4
MA0029.10.829
MA0030.10.00289
MA0031.10.00871
MA0035.20.0387
MA0038.14.84918e-4
MA0039.20.669
MA0040.10.682
MA0041.10.318
MA0042.10.341
MA0043.10.303
MA0046.10.361
MA0047.20.451
MA0048.19.39688e-4
MA0050.19.58613e-7
MA0051.11.69048e-5
MA0052.10.783
MA0055.16.71979e-4
MA0057.10.662
MA0058.10.732
MA0059.10.634
MA0060.12.20524e-13
MA0061.10.00209
MA0062.20.0386
MA0065.20.0677
MA0066.10.227
MA0067.10.145
MA0068.10.792
MA0069.10.794
MA0070.10.112
MA0071.10.85
MA0072.10.951
MA0073.10.593
MA0074.10.661
MA0076.14.29574e-4
MA0077.10.809
MA0078.10.93
MA0079.20.469
MA0080.28.04581e-11
MA0081.10.199
MA0083.10.414
MA0084.10.164
MA0087.10.56
MA0088.10.00124
MA0090.10.844
MA0091.10.404
MA0092.10.194
MA0093.10.937
MA0099.20.579
MA0100.10.0423
MA0101.10.119
MA0102.20.00715
MA0103.12.40151e-4
MA0104.20.0818
MA0105.10.0081
MA0106.10.204
MA0107.10.00843
MA0108.20.325
MA0111.10.563
MA0112.23.8312e-4
MA0113.10.938
MA0114.10.393
MA0115.10.833
MA0116.10.119
MA0117.10.804
MA0119.10.816
MA0122.10.278
MA0124.10.757
MA0125.10.414
MA0131.10.132
MA0135.10.495
MA0136.12.61183e-6
MA0137.20.121
MA0138.20.529
MA0139.10.545
MA0140.10.236
MA0141.10.938
MA0142.10.121
MA0143.10.41
MA0144.10.0568
MA0145.10.0488
MA0146.10.375
MA0147.10.145
MA0148.10.288
MA0149.10.995
MA0150.10.0945
MA0152.10.0407
MA0153.10.461
MA0154.10.00471
MA0155.10.133
MA0156.10.142
MA0157.10.0111
MA0159.10.0107
MA0160.10.181
MA0162.10.524
MA0163.10.646
MA0164.10.937
MA0258.10.00131
MA0259.10.238



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12052

Novel motifP-value
10.366
100.348
1000.927
1010.387
1020.54
1030.217
1040.799
1050.979
1068.33331e-5
1070.0944
1080.183
1090.751
110.823
1100.687
1110.971
1120.0319
1130.00552
1140.195
1150.728
1160.695
1170.88
1180.909
1190.118
120.797
1200.201
1210.628
1220.23
1230.0414
1240.253
1250.819
1260.78
1270.297
1280.0117
1290.113
130.943
1300.0163
1310.313
1320.883
1330.679
1340.605
1350.0329
1360.239
1370.123
1380.102
1391.10283e-5
140.194
1400.978
1410.808
1420.674
1430.37
1440.534
1450.982
1460.715
1470.964
1480.236
1490.233
150.167
1500.911
1510.138
1520.0594
1530.218
1540.546
1550.0292
1560.548
1570.103
1580.029
1590.0444
160.77
1600.96
1610.562
1620.448
1630.653
1640.681
1650.466
1660.854
1670.337
1680.457
1690.0628
170.19
180.799
190.554
20.574
200.353
210.279
220.377
230.0209
240.857
250.736
260.973
270.514
280.555
290.795
30.539
300.758
310.647
320.839
330.444
340.306
350.502
360.339
370.396
380.262
390.794
40.232
400.211
410.129
420.741
430.236
440.806
450.0803
460.281
470.916
480.843
490.181
50.0968
500.779
510.481
520.0812
530.156
540.439
550.421
560.678
570.614
580.149
590.306
60.661
600.022
610.948
620.122
630.552
640.653
650.119
660.0387
670.75
680.995
690.883
70.336
700.00439
710.62
720.211
730.448
740.242
750.413
760.837
770.541
780.428
790.546
80.646
800.105
810.394
820.0187
830.306
840.934
850.00673
860.542
870.0993
880.492
890.0921
90.63
900.666
910.348
920.0887
930.895
940.336
950.429
960.288
970.672
980.184
990.0626



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12052


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002620 (skin fibroblast)
0002551 (fibroblast of dermis)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002097 (skin of body)
0002199 (integument)
0002384 (connective tissue)
0000479 (tissue)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0004923 (organ component layer)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003102 (surface structure)
0010317 (germ layer / neural crest derived structure)
0002067 (dermis)
0002416 (integumental system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000057 (fibroblast sample)
0000250 (human fibroblast of skin sample)
0000001 (sample)
0000062 (human dermal fibroblast sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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