FFCP PHASE1:Hg19::chr17:7211268..7211275,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:7211268..7211275,+
|short_description=p9@EIF5A
|description=CAGE_peak_9_at_EIF5A_5end
|association_with_transcript=-12bp_to_ENST00000419711,NM_001143761,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1984 | |EntrezGene=1984 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3300 | |HGNC=3300 | ||
|TSSclassifier=strong | |||
|UniProt=P63241,Q6IS14 | |UniProt=P63241,Q6IS14 | ||
|association_with_transcript=-12bp_to_ENST00000419711,NM_001143761,uc002gft.2_5end | |||
|cluster_id=chr17:7211268..7211275,+ | |||
|description=CAGE_peak_9_at_EIF5A_5end | |||
|id=chr17:7211268..7211275,+ | |||
|ontology_enrichment_celltype=CL:0000548!4.50e-28!679;CL:0000004!4.50e-28!679;CL:0000255!4.50e-28!679;CL:0000012!5.37e-28!682;CL:0002321!9.33e-24!248;CL:0000220!3.56e-23!246;CL:0000066!6.08e-20!254;CL:0000222!8.77e-18!119;CL:0000003!4.96e-16!722;CL:0000055!9.41e-16!180;CL:0000144!3.68e-15!625;CL:0000192!6.13e-15!42;CL:0000514!6.13e-15!42;CL:0000183!4.92e-14!59;CL:0000680!1.94e-13!57;CL:0000056!1.94e-13!57;CL:0000355!1.94e-13!57;CL:0000359!3.79e-13!32;CL:0002371!3.79e-13!591;CL:0000187!4.17e-13!54;CL:0000393!1.03e-12!60;CL:0000211!1.03e-12!60;CL:0000076!3.50e-10!62;CL:0000063!9.79e-09!578 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.26e-13;32!CL:0000192;2.77e-11;43!CL:0002159;1.71e-07;14!CL:0000187;2.48e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.04e-20,250;CL:0000222,3.31e-18,121;CL:0000192,5.84e-16,43;CL:0000514,5.84e-16,43;CL:0000359,9.14e-15,32;CL:0000066,6.31e-14,253;CL:0000680,7.69e-14,58;CL:0000056,7.69e-14,58;CL:0000355,7.69e-14,58;CL:0000187,1.23e-13,55;CL:0000393,2.22e-13,61;CL:0000211,2.22e-13,61;CL:0000076,4.59e-10,63;CL:0002159,3.44e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000514;2.77e-11;43!CL:0000355;3.36e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!7.71e-15!238;UBERON:0009142!7.71e-15!238;UBERON:0001637!1.98e-13!42;UBERON:0003509!1.98e-13!42;UBERON:0004572!1.98e-13!42;UBERON:0005256!3.33e-13!143;UBERON:0000914!1.08e-12!83;UBERON:0002329!1.08e-12!83;UBERON:0003077!1.08e-12!83;UBERON:0003059!1.08e-12!83;UBERON:0007282!1.08e-12!83;UBERON:0009618!1.08e-12!83;UBERON:0007285!1.08e-12!83;UBERON:0000486!1.24e-12!82;UBERON:0002049!1.43e-12!79;UBERON:0007798!1.43e-12!79;UBERON:0001981!3.07e-12!60;UBERON:0007500!3.07e-12!60;UBERON:0004537!3.07e-12!60;UBERON:0006965!3.07e-12!60;UBERON:0003914!3.35e-12!118;UBERON:0004290!4.69e-12!70;UBERON:0000055!8.64e-12!69;UBERON:0004872!1.35e-11!84;UBERON:0002100!1.97e-11!216;UBERON:0001134!3.60e-11!61;UBERON:0002036!3.60e-11!61;UBERON:0003082!3.60e-11!61;UBERON:0002385!2.92e-10!63;UBERON:0001015!2.92e-10!63;UBERON:0000383!2.92e-10!63;UBERON:0000490!3.37e-10!138;UBERON:0004573!1.20e-09!33;UBERON:0004571!1.20e-09!33;UBERON:0000481!2.67e-08!347;UBERON:0004535!3.78e-08!110;UBERON:0000119!6.71e-08!312;UBERON:0001009!1.41e-07!113;UBERON:0000483!1.62e-07!309;UBERON:0000072!2.99e-07!46;UBERON:0001737!3.81e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.80e-09;42!UBERON:0003509;7.80e-09;42!UBERON:0004572;7.80e-09;42!UBERON:0001737;1.14e-08;9!UBERON:0001557;1.14e-08;9!UBERON:0007500;2.35e-08;56!UBERON:0001981;2.35e-08;56!UBERON:0004537;2.35e-08;56!UBERON:0004573;5.02e-08;33!UBERON:0004571;5.02e-08;33!UBERON:0003914;9.41e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,4.54e-15,78;UBERON:0001637,4.67e-14,42;UBERON:0003509,4.67e-14,42;UBERON:0004572,4.67e-14,42;UBERON:0000486,4.35e-13,83;UBERON:0007500,7.21e-13,59;UBERON:0001981,7.21e-13,59;UBERON:0004537,7.21e-13,59;UBERON:0006965,7.21e-13,59;UBERON:0002329,7.72e-13,71;UBERON:0003059,7.72e-13,71;UBERON:0007282,7.72e-13,71;UBERON:0004290,7.72e-13,71;UBERON:0009618,7.72e-13,71;UBERON:0002049,9.88e-13,78;UBERON:0007798,9.88e-13,78;UBERON:0004872,1.88e-12,83;UBERON:0003077,2.07e-12,72;UBERON:0007285,2.07e-12,72;UBERON:0000055,3.03e-12,68;UBERON:0003914,3.05e-12,117;UBERON:0007524,5.36e-12,73;UBERON:0001134,6.89e-12,62;UBERON:0002036,6.89e-12,62;UBERON:0003082,6.89e-12,62;UBERON:0005256,1.87e-11,122;UBERON:0002385,5.06e-11,64;UBERON:0001015,5.06e-11,64;UBERON:0000383,5.06e-11,64;UBERON:0000490,1.26e-10,148;UBERON:0002100,1.35e-09,199;UBERON:0004573,2.02e-09,33;UBERON:0004571,2.02e-09,33;UBERON:0003104,3.05e-09,160;UBERON:0009142,3.05e-09,160;UBERON:0000119,6.61e-09,309;UBERON:0001737,8.88e-09,9;UBERON:0000483,1.42e-08,306;UBERON:0004535,2.26e-08,109;UBERON:0001009,1.13e-07,112 | |||
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| ||
|short_description=p9@EIF5A | |||
}} | }} |
Latest revision as of 06:56, 17 September 2015
Short description: | p9@EIF5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_EIF5A_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000419711, NM_001143761, uc002gft.2_5end |
EntrezGene: | EIF5A |
HGNC: | 3300 |
UniProt: | P63241Q6IS14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.04e-20 | 250 |
mesodermal cell | 3.31e-18 | 121 |
smooth muscle cell | 5.84e-16 | 43 |
smooth muscle myoblast | 5.84e-16 | 43 |
vascular associated smooth muscle cell | 9.14e-15 | 32 |
epithelial cell | 6.31e-14 | 253 |
muscle precursor cell | 7.69e-14 | 58 |
myoblast | 7.69e-14 | 58 |
multi-potent skeletal muscle stem cell | 7.69e-14 | 58 |
muscle cell | 1.23e-13 | 55 |
electrically responsive cell | 2.22e-13 | 61 |
electrically active cell | 2.22e-13 | 61 |
squamous epithelial cell | 4.59e-10 | 63 |
general ecto-epithelial cell | 3.44e-07 | 14 |