FFCP PHASE1:Hg19::chr17:7255461..7255518,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:7255461..7255518,+
|short_description=p1@KCTD11
|description=CAGE_peak_1_at_KCTD11_5end
|association_with_transcript=253bp_to_ENST00000333751,NM_001002914...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=147040 | |EntrezGene=147040 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21302 | |HGNC=21302 | ||
|TSSclassifier=strong | |||
|UniProt=Q693B1 | |UniProt=Q693B1 | ||
|association_with_transcript=253bp_to_ENST00000333751,NM_001002914,uc002gge.3_5end | |||
|cluster_id=chr17:7255461..7255518,+ | |||
|coexpression_cluster_id=C3674 | |||
|description=CAGE_peak_1_at_KCTD11_5end | |||
|id=chr17:7255461..7255518,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.11e-11!180;CL:0000183!8.36e-10!59;CL:0000192!1.84e-09!42;CL:0000514!1.84e-09!42;CL:0000680!9.53e-09!57;CL:0000056!9.53e-09!57;CL:0000355!9.53e-09!57;CL:0000187!1.34e-08!54;CL:0000359!1.73e-08!32;CL:0002368!2.86e-07!13;CL:0000393!3.57e-07!60;CL:0000211!3.57e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.85e-08;32!CL:0000192;1.51e-07;43!CL:0002368;2.85e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,7.93e-10,43;CL:0000514,7.93e-10,43;CL:0000680,4.42e-09,58;CL:0000056,4.42e-09,58;CL:0000355,4.42e-09,58;CL:0000187,6.16e-09,55;CL:0000359,1.72e-08,32;CL:0000393,1.77e-07,61;CL:0000211,1.77e-07,61;CL:0002368,2.85e-07,13;CL:0000057,6.42e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;1.51e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!6.65e-16!659;UBERON:0000475!6.67e-15!365;UBERON:0000467!9.67e-13!625;UBERON:0000480!1.63e-12!626;UBERON:0002100!1.24e-11!216;UBERON:0000481!9.53e-10!347;UBERON:0000486!9.69e-10!82;UBERON:0003104!3.64e-09!238;UBERON:0009142!3.64e-09!238;UBERON:0002050!4.27e-09!605;UBERON:0005423!4.27e-09!605;UBERON:0005256!4.56e-09!143;UBERON:0000922!5.84e-09!612;UBERON:0000923!8.57e-09!604;UBERON:0005291!8.57e-09!604;UBERON:0006598!8.57e-09!604;UBERON:0002532!8.57e-09!604;UBERON:0003103!2.21e-08!69;UBERON:0000914!3.11e-08!83;UBERON:0002329!3.11e-08!83;UBERON:0003077!3.11e-08!83;UBERON:0003059!3.11e-08!83;UBERON:0007282!3.11e-08!83;UBERON:0009618!3.11e-08!83;UBERON:0007285!3.11e-08!83;UBERON:0003102!3.12e-08!95;UBERON:0001134!4.57e-08!61;UBERON:0002036!4.57e-08!61;UBERON:0003082!4.57e-08!61;UBERON:0002385!5.14e-08!63;UBERON:0001015!5.14e-08!63;UBERON:0000383!5.14e-08!63;UBERON:0004290!2.05e-07!70;UBERON:0001008!3.20e-07!45;UBERON:0006554!7.45e-07!44;UBERON:0000062!7.46e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.65e-10,199;UBERON:0000486,4.67e-10,83;UBERON:0003104,1.14e-09,160;UBERON:0009142,1.14e-09,160;UBERON:0003102,1.73e-09,99;UBERON:0005423,2.30e-09,581;UBERON:0000922,5.33e-09,592;UBERON:0007503,7.98e-09,78;UBERON:0001134,2.19e-08,62;UBERON:0002036,2.19e-08,62;UBERON:0003082,2.19e-08,62;UBERON:0002385,2.49e-08,64;UBERON:0001015,2.49e-08,64;UBERON:0000383,2.49e-08,64;UBERON:0003103,4.48e-08,68;UBERON:0001008,4.89e-08,48;UBERON:0007524,1.04e-07,73;UBERON:0002329,1.04e-07,71;UBERON:0003059,1.04e-07,71;UBERON:0007282,1.04e-07,71;UBERON:0004290,1.04e-07,71;UBERON:0009618,1.04e-07,71;UBERON:0006554,1.16e-07,47;UBERON:0003077,1.73e-07,72;UBERON:0007285,1.73e-07,72;UBERON:0002050,2.46e-07,564;UBERON:0005256,9.57e-07,122 | |||
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| ||
|short_description=p1@KCTD11 | |||
}} | }} |
Latest revision as of 08:03, 17 September 2015
Short description: | p1@KCTD11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCTD11_5end |
Coexpression cluster: | C3674_Small_Urothelial_Prostate_Esophageal_Alveolar_chorionic_Mammary |
Association with transcript: | 253bp_to_ENST00000333751, NM_001002914, uc002gge.3_5end |
EntrezGene: | KCTD11 |
HGNC: | 21302 |
UniProt: | Q693B1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 7.93e-10 | 43 |
smooth muscle myoblast | 7.93e-10 | 43 |
muscle precursor cell | 4.42e-09 | 58 |
myoblast | 4.42e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.42e-09 | 58 |
muscle cell | 6.16e-09 | 55 |
vascular associated smooth muscle cell | 1.72e-08 | 32 |
electrically responsive cell | 1.77e-07 | 61 |
electrically active cell | 1.77e-07 | 61 |
respiratory epithelial cell | 2.85e-07 | 13 |
fibroblast | 6.42e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
trunk | 3.65e-10 | 199 |
multilaminar epithelium | 4.67e-10 | 83 |
mesenchyme | 1.14e-09 | 160 |
entire embryonic mesenchyme | 1.14e-09 | 160 |
surface structure | 1.73e-09 | 99 |
developing anatomical structure | 2.30e-09 | 581 |
embryo | 5.33e-09 | 592 |
epithelial vesicle | 7.98e-09 | 78 |
skeletal muscle tissue | 2.19e-08 | 62 |
striated muscle tissue | 2.19e-08 | 62 |
myotome | 2.19e-08 | 62 |
muscle tissue | 2.49e-08 | 64 |
musculature | 2.49e-08 | 64 |
musculature of body | 2.49e-08 | 64 |
compound organ | 4.48e-08 | 68 |
renal system | 4.89e-08 | 48 |
dense mesenchyme tissue | 1.04e-07 | 73 |
somite | 1.04e-07 | 71 |
presomitic mesoderm | 1.04e-07 | 71 |
presumptive segmental plate | 1.04e-07 | 71 |
dermomyotome | 1.04e-07 | 71 |
trunk paraxial mesoderm | 1.04e-07 | 71 |
urinary system structure | 1.16e-07 | 47 |
paraxial mesoderm | 1.73e-07 | 72 |
presumptive paraxial mesoderm | 1.73e-07 | 72 |
embryonic structure | 2.46e-07 | 564 |
trunk mesenchyme | 9.57e-07 | 122 |