FFCP PHASE1:Hg19::chr10:12673592..12673597,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:12673592..12673597,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:12673592..12673597,+ | |description=CAGE_peak_at_chr10:12673592..12673597,+ | ||
|id=chr10:12673592..12673597,+ | |id=chr10:12673592..12673597,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.66e-60!42;CL:0000860!3.00e-56!45;CL:0002009!3.59e-46!65;CL:0000557!5.11e-42!71;CL:0002194!1.54e-38!63;CL:0000576!1.54e-38!63;CL:0000040!1.54e-38!63;CL:0000559!1.54e-38!63;CL:0000453!4.03e-37!5;CL:0000839!2.12e-34!70;CL:0000763!5.56e-34!112;CL:0000049!5.56e-34!112;CL:0000766!1.89e-31!76;CL:0000738!1.96e-26!140;CL:0002031!1.30e-22!124;CL:0002032!7.69e-22!165;CL:0000837!7.69e-22!165;CL:0000037!8.63e-21!172;CL:0000566!8.63e-21!172;CL:0000990!1.32e-20!8;CL:0000988!1.98e-19!182;CL:0002087!6.38e-19!119;CL:0000451!7.71e-17!10;CL:0001014!2.17e-16!2;CL:0001016!2.17e-16!2;CL:0000134!9.19e-09!358;CL:0002320!1.64e-08!365;CL:0000219!1.28e-07!390;CL:0000048!2.14e-07!430;CL:0000723!3.13e-07!436;CL:0000034!5.10e-07!444 | |ontology_enrichment_celltype=CL:0002057!1.66e-60!42;CL:0000860!3.00e-56!45;CL:0002009!3.59e-46!65;CL:0000557!5.11e-42!71;CL:0002194!1.54e-38!63;CL:0000576!1.54e-38!63;CL:0000040!1.54e-38!63;CL:0000559!1.54e-38!63;CL:0000453!4.03e-37!5;CL:0000839!2.12e-34!70;CL:0000763!5.56e-34!112;CL:0000049!5.56e-34!112;CL:0000766!1.89e-31!76;CL:0000738!1.96e-26!140;CL:0002031!1.30e-22!124;CL:0002032!7.69e-22!165;CL:0000837!7.69e-22!165;CL:0000037!8.63e-21!172;CL:0000566!8.63e-21!172;CL:0000990!1.32e-20!8;CL:0000988!1.98e-19!182;CL:0002087!6.38e-19!119;CL:0000451!7.71e-17!10;CL:0001014!2.17e-16!2;CL:0001016!2.17e-16!2;CL:0000134!9.19e-09!358;CL:0002320!1.64e-08!365;CL:0000219!1.28e-07!390;CL:0000048!2.14e-07!430;CL:0000723!3.13e-07!436;CL:0000034!5.10e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.63e-53;33!CL:0002057;5.63e-53;33!CL:0000473;1.04e-35;39!CL:0000234;1.04e-35;39!CL:0001014;1.87e-31;2!CL:0001016;1.87e-31;2!CL:0000576;1.77e-23;48!CL:0000766;2.99e-13;69!CL:0000453;3.23e-13;5!CL:0000840;3.57e-11;5!CL:0002087;2.65e-10;104!CL:0000763;5.73e-08;100!CL:0000990;9.52e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.24e-43,42;CL:0002057,8.24e-43,42;CL:0002009,2.07e-40,61;CL:0000473,2.31e-37,48;CL:0000234,2.31e-37,48;CL:0000557,9.06e-37,67;CL:0001014,1.60e-31,2;CL:0001016,1.60e-31,2;CL:0002194,9.96e-30,59;CL:0000576,9.96e-30,59;CL:0000040,9.96e-30,59;CL:0000559,9.96e-30,59;CL:0000839,1.56e-26,66;CL:0000766,2.79e-24,72;CL:0000763,1.37e-22,108;CL:0000049,1.37e-22,108;CL:0002031,3.00e-20,120;CL:0000738,9.17e-18,136;CL:0002087,6.30e-15,115;CL:0002032,7.41e-15,161;CL:0000837,7.41e-15,161;CL:0000037,3.40e-14,168;CL:0000988,2.02e-13,177;CL:0000453,3.03e-13,5;CL:0000840,3.39e-11,5;CL:0001029,3.39e-11,5;CL:0000990,9.20e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.72e-28;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.14e-37!80;UBERON:0001474!3.90e-34!86;UBERON:0004765!1.45e-28!101;UBERON:0001434!1.45e-28!101;UBERON:0002390!2.99e-28!102;UBERON:0003061!2.99e-28!102;UBERON:0002193!2.04e-25!112;UBERON:0002405!1.16e-24!115;UBERON:0002204!7.61e-16!167;UBERON:0003081!9.87e-13!216;UBERON:0002384!3.64e-08!375 | |ontology_enrichment_uberon=UBERON:0002371!6.14e-37!80;UBERON:0001474!3.90e-34!86;UBERON:0004765!1.45e-28!101;UBERON:0001434!1.45e-28!101;UBERON:0002390!2.99e-28!102;UBERON:0003061!2.99e-28!102;UBERON:0002193!2.04e-25!112;UBERON:0002405!1.16e-24!115;UBERON:0002204!7.61e-16!167;UBERON:0003081!9.87e-13!216;UBERON:0002384!3.64e-08!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.28e-32,76;UBERON:0001474,5.79e-30,82;UBERON:0004765,3.01e-27,90;UBERON:0002405,2.39e-26,93;UBERON:0002390,5.72e-25,98;UBERON:0003061,5.72e-25,98;UBERON:0001434,1.87e-24,100;UBERON:0002193,1.37e-22,108;UBERON:0002204,2.75e-14,167;UBERON:0003081,1.45e-11,203;UBERON:0000926,5.11e-07,315;UBERON:0004120,5.11e-07,315;UBERON:0006603,5.11e-07,315 | |||
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|short_description=p@chr10:12673592..12673597,+ | |short_description=p@chr10:12673592..12673597,+ | ||
}} | }} |
Latest revision as of 11:25, 23 July 2015
Short description: | p@chr10:12673592..12673597, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:12673592..12673597, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.24e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.24e-43 | 42 |
macrophage dendritic cell progenitor | 2.07e-40 | 61 |
defensive cell | 2.31e-37 | 48 |
phagocyte | 2.31e-37 | 48 |
granulocyte monocyte progenitor cell | 9.06e-37 | 67 |
CD1a-positive Langerhans cell | 1.60e-31 | 2 |
immature CD1a-positive Langerhans cell | 1.60e-31 | 2 |
monopoietic cell | 9.96e-30 | 59 |
monocyte | 9.96e-30 | 59 |
monoblast | 9.96e-30 | 59 |
promonocyte | 9.96e-30 | 59 |
myeloid lineage restricted progenitor cell | 1.56e-26 | 66 |
myeloid leukocyte | 2.79e-24 | 72 |
myeloid cell | 1.37e-22 | 108 |
common myeloid progenitor | 1.37e-22 | 108 |
hematopoietic lineage restricted progenitor cell | 3.00e-20 | 120 |
leukocyte | 9.17e-18 | 136 |
nongranular leukocyte | 6.30e-15 | 115 |
hematopoietic oligopotent progenitor cell | 7.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-15 | 161 |
hematopoietic stem cell | 3.40e-14 | 168 |
hematopoietic cell | 2.02e-13 | 177 |
Langerhans cell | 3.03e-13 | 5 |
immature conventional dendritic cell | 3.39e-11 | 5 |
common dendritic progenitor | 3.39e-11 | 5 |
conventional dendritic cell | 9.20e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.28e-32 | 76 |
bone element | 5.79e-30 | 82 |
skeletal element | 3.01e-27 | 90 |
immune system | 2.39e-26 | 93 |
hematopoietic system | 5.72e-25 | 98 |
blood island | 5.72e-25 | 98 |
skeletal system | 1.87e-24 | 100 |
hemolymphoid system | 1.37e-22 | 108 |
musculoskeletal system | 2.75e-14 | 167 |
lateral plate mesoderm | 1.45e-11 | 203 |
mesoderm | 5.11e-07 | 315 |
mesoderm-derived structure | 5.11e-07 | 315 |
presumptive mesoderm | 5.11e-07 | 315 |