FFCP PHASE1:Hg19::chr10:27818473..27818493,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-432bp_to_AK090947_5end | |association_with_transcript=-432bp_to_AK090947_5end | ||
|cluster_id=chr10:27818473..27818493,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_1_at_AK090947_5end | |description=CAGE_peak_1_at_AK090947_5end | ||
|id=chr10:27818473..27818493,+ | |id=chr10:27818473..27818493,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.26e-45!42;CL:0000860!2.03e-44!45;CL:0000839!5.62e-34!70;CL:0000766!1.17e-32!76;CL:0002194!2.00e-32!63;CL:0000576!2.00e-32!63;CL:0000040!2.00e-32!63;CL:0000559!2.00e-32!63;CL:0000557!2.65e-31!71;CL:0002009!3.95e-31!65;CL:0000763!7.81e-27!112;CL:0000049!7.81e-27!112;CL:0002031!3.47e-24!124;CL:0000738!8.88e-24!140;CL:0002032!1.27e-22!165;CL:0000837!1.27e-22!165;CL:0002087!9.21e-22!119;CL:0000037!3.92e-21!172;CL:0000566!3.92e-21!172;CL:0000988!3.02e-20!182;CL:0002320!1.10e-09!365;CL:0000134!1.34e-09!358;CL:0000048!2.61e-08!430;CL:0000723!5.67e-08!436;CL:0000219!6.00e-08!390;CL:0000034!1.54e-07!444 | |ontology_enrichment_celltype=CL:0002057!3.26e-45!42;CL:0000860!2.03e-44!45;CL:0000839!5.62e-34!70;CL:0000766!1.17e-32!76;CL:0002194!2.00e-32!63;CL:0000576!2.00e-32!63;CL:0000040!2.00e-32!63;CL:0000559!2.00e-32!63;CL:0000557!2.65e-31!71;CL:0002009!3.95e-31!65;CL:0000763!7.81e-27!112;CL:0000049!7.81e-27!112;CL:0002031!3.47e-24!124;CL:0000738!8.88e-24!140;CL:0002032!1.27e-22!165;CL:0000837!1.27e-22!165;CL:0002087!9.21e-22!119;CL:0000037!3.92e-21!172;CL:0000566!3.92e-21!172;CL:0000988!3.02e-20!182;CL:0002320!1.10e-09!365;CL:0000134!1.34e-09!358;CL:0000048!2.61e-08!430;CL:0000723!5.67e-08!436;CL:0000219!6.00e-08!390;CL:0000034!1.54e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.04e-106;33!CL:0002057;2.04e-106;33!CL:0000473;7.08e-74;39!CL:0000234;7.08e-74;39!CL:0000576;3.22e-49;48!CL:0000766;2.91e-27;69!CL:0000763;2.74e-16;100!CL:0002087;1.52e-15;104!CL:0000738;1.07e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.60e-93,42;CL:0002057,3.60e-93,42;CL:0000473,4.41e-81,48;CL:0000234,4.41e-81,48;CL:0002194,3.77e-64,59;CL:0000576,3.77e-64,59;CL:0000040,3.77e-64,59;CL:0000559,3.77e-64,59;CL:0002009,5.78e-62,61;CL:0000839,4.53e-57,66;CL:0000766,5.82e-57,72;CL:0000557,3.54e-56,67;CL:0000763,2.57e-40,108;CL:0000049,2.57e-40,108;CL:0002087,2.13e-31,115;CL:0002031,6.05e-30,120;CL:0000738,1.37e-28,136;CL:0002032,7.27e-26,161;CL:0000837,7.27e-26,161;CL:0000037,1.25e-24,168;CL:0000988,3.46e-23,177;CL:0000134,1.38e-09,354;CL:0002320,2.56e-09,361;CL:0000219,2.25e-08,386;CL:0000048,3.23e-07,427;CL:0000723,4.66e-07,433;CL:0000034,7.51e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.22e-64;42!CL:0000049;5.96e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.40e-28!80;UBERON:0001474!1.22e-25!86;UBERON:0002390!4.52e-24!102;UBERON:0003061!4.52e-24!102;UBERON:0004765!1.25e-21!101;UBERON:0001434!1.25e-21!101;UBERON:0002193!6.22e-21!112;UBERON:0002405!6.49e-20!115;UBERON:0002204!8.12e-15!167;UBERON:0002384!1.44e-09!375;UBERON:0003081!1.49e-09!216 | |ontology_enrichment_uberon=UBERON:0002371!2.40e-28!80;UBERON:0001474!1.22e-25!86;UBERON:0002390!4.52e-24!102;UBERON:0003061!4.52e-24!102;UBERON:0004765!1.25e-21!101;UBERON:0001434!1.25e-21!101;UBERON:0002193!6.22e-21!112;UBERON:0002405!6.49e-20!115;UBERON:0002204!8.12e-15!167;UBERON:0002384!1.44e-09!375;UBERON:0003081!1.49e-09!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.48e-49,76;UBERON:0001474,2.30e-45,82;UBERON:0004765,4.73e-41,90;UBERON:0002405,1.27e-39,93;UBERON:0002390,1.96e-37,98;UBERON:0003061,1.96e-37,98;UBERON:0001434,1.28e-36,100;UBERON:0002193,1.18e-33,108;UBERON:0002204,1.70e-20,167;UBERON:0003081,3.45e-16,203;UBERON:0000926,5.01e-09,315;UBERON:0004120,5.01e-09,315;UBERON:0006603,5.01e-09,315;UBERON:0002384,5.93e-09,371 | |||
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| ||
|short_description=p1@AK090947 | |short_description=p1@AK090947 | ||
}} | }} |
Latest revision as of 12:55, 23 July 2015
Short description: | p1@AK090947 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK090947_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -432bp_to_AK090947_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.60e-93 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.60e-93 | 42 |
defensive cell | 4.41e-81 | 48 |
phagocyte | 4.41e-81 | 48 |
monopoietic cell | 3.77e-64 | 59 |
monocyte | 3.77e-64 | 59 |
monoblast | 3.77e-64 | 59 |
promonocyte | 3.77e-64 | 59 |
macrophage dendritic cell progenitor | 5.78e-62 | 61 |
myeloid lineage restricted progenitor cell | 4.53e-57 | 66 |
myeloid leukocyte | 5.82e-57 | 72 |
granulocyte monocyte progenitor cell | 3.54e-56 | 67 |
myeloid cell | 2.57e-40 | 108 |
common myeloid progenitor | 2.57e-40 | 108 |
nongranular leukocyte | 2.13e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 6.05e-30 | 120 |
leukocyte | 1.37e-28 | 136 |
hematopoietic oligopotent progenitor cell | 7.27e-26 | 161 |
hematopoietic multipotent progenitor cell | 7.27e-26 | 161 |
hematopoietic stem cell | 1.25e-24 | 168 |
hematopoietic cell | 3.46e-23 | 177 |
mesenchymal cell | 1.38e-09 | 354 |
connective tissue cell | 2.56e-09 | 361 |
motile cell | 2.25e-08 | 386 |
multi fate stem cell | 3.23e-07 | 427 |
somatic stem cell | 4.66e-07 | 433 |
stem cell | 7.51e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.48e-49 | 76 |
bone element | 2.30e-45 | 82 |
skeletal element | 4.73e-41 | 90 |
immune system | 1.27e-39 | 93 |
hematopoietic system | 1.96e-37 | 98 |
blood island | 1.96e-37 | 98 |
skeletal system | 1.28e-36 | 100 |
hemolymphoid system | 1.18e-33 | 108 |
musculoskeletal system | 1.70e-20 | 167 |
lateral plate mesoderm | 3.45e-16 | 203 |
mesoderm | 5.01e-09 | 315 |
mesoderm-derived structure | 5.01e-09 | 315 |
presumptive mesoderm | 5.01e-09 | 315 |
connective tissue | 5.93e-09 | 371 |