FFCP PHASE1:Hg19::chr10:64495881..64495891,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:64495881..64495891,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_at_chr10:64495881..64495891,+ | |description=CAGE_peak_at_chr10:64495881..64495891,+ | ||
|id=chr10:64495881..64495891,+ | |id=chr10:64495881..64495891,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.12e-81!42;CL:0000860!1.67e-75!45;CL:0002194!9.99e-55!63;CL:0000576!9.99e-55!63;CL:0000040!9.99e-55!63;CL:0000559!9.99e-55!63;CL:0002009!7.54e-53!65;CL:0000766!8.10e-51!76;CL:0000839!1.29e-48!70;CL:0000557!7.67e-48!71;CL:0002087!3.87e-46!119;CL:0002031!5.94e-44!124;CL:0000738!1.24e-42!140;CL:0002032!6.70e-35!165;CL:0000837!6.70e-35!165;CL:0000037!3.91e-33!172;CL:0000566!3.91e-33!172;CL:0000988!1.10e-32!182;CL:0000763!3.26e-32!112;CL:0000049!3.26e-32!112;CL:0000134!4.24e-15!358;CL:0002320!1.24e-14!365;CL:0000219!5.43e-13!390;CL:0000623!1.32e-12!3;CL:0000825!1.32e-12!3;CL:0000048!5.04e-11!430;CL:0000723!9.59e-11!436;CL:0000034!2.21e-10!444 | |ontology_enrichment_celltype=CL:0002057!2.12e-81!42;CL:0000860!1.67e-75!45;CL:0002194!9.99e-55!63;CL:0000576!9.99e-55!63;CL:0000040!9.99e-55!63;CL:0000559!9.99e-55!63;CL:0002009!7.54e-53!65;CL:0000766!8.10e-51!76;CL:0000839!1.29e-48!70;CL:0000557!7.67e-48!71;CL:0002087!3.87e-46!119;CL:0002031!5.94e-44!124;CL:0000738!1.24e-42!140;CL:0002032!6.70e-35!165;CL:0000837!6.70e-35!165;CL:0000037!3.91e-33!172;CL:0000566!3.91e-33!172;CL:0000988!1.10e-32!182;CL:0000763!3.26e-32!112;CL:0000049!3.26e-32!112;CL:0000134!4.24e-15!358;CL:0002320!1.24e-14!365;CL:0000219!5.43e-13!390;CL:0000623!1.32e-12!3;CL:0000825!1.32e-12!3;CL:0000048!5.04e-11!430;CL:0000723!9.59e-11!436;CL:0000034!2.21e-10!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.69e-116;33!CL:0002057;1.69e-116;33!CL:0000473;1.21e-76;39!CL:0000234;1.21e-76;39!CL:0000576;1.72e-59;48!CL:0000766;1.04e-29;69!CL:0000763;1.26e-14;100!CL:0002087;2.88e-14;104!CL:0000738;8.68e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.25e-101,42;CL:0002057,4.25e-101,42;CL:0000473,3.98e-88,48;CL:0000234,3.98e-88,48;CL:0002194,5.89e-70,59;CL:0000576,5.89e-70,59;CL:0000040,5.89e-70,59;CL:0000559,5.89e-70,59;CL:0002009,1.31e-67,61;CL:0000839,2.33e-62,66;CL:0000557,2.12e-61,67;CL:0000766,5.28e-57,72;CL:0000763,3.11e-37,108;CL:0000049,3.11e-37,108;CL:0002087,8.22e-35,115;CL:0002031,2.98e-33,120;CL:0000738,5.04e-29,136;CL:0002032,4.40e-24,161;CL:0000837,4.40e-24,161;CL:0000037,5.84e-23,168;CL:0000988,1.21e-21,177;CL:0000134,2.93e-09,354;CL:0002320,5.13e-09,361;CL:0000219,3.71e-08,386;CL:0000048,4.21e-07,427;CL:0000723,5.89e-07,433;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.08e-70;42!CL:0000049;1.05e-12;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.01e-41!80;UBERON:0001474!4.49e-41!86;UBERON:0004765!6.05e-34!101;UBERON:0001434!6.05e-34!101;UBERON:0002390!1.29e-33!102;UBERON:0003061!1.29e-33!102;UBERON:0002193!5.52e-30!112;UBERON:0002405!5.78e-29!115;UBERON:0002204!1.02e-17!167;UBERON:0002384!5.35e-14!375;UBERON:0003081!3.91e-13!216 | |ontology_enrichment_uberon=UBERON:0002371!1.01e-41!80;UBERON:0001474!4.49e-41!86;UBERON:0004765!6.05e-34!101;UBERON:0001434!6.05e-34!101;UBERON:0002390!1.29e-33!102;UBERON:0003061!1.29e-33!102;UBERON:0002193!5.52e-30!112;UBERON:0002405!5.78e-29!115;UBERON:0002204!1.02e-17!167;UBERON:0002384!5.35e-14!375;UBERON:0003081!3.91e-13!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.75e-54,76;UBERON:0001474,8.50e-50,82;UBERON:0004765,3.61e-45,90;UBERON:0002405,1.23e-43,93;UBERON:0002390,2.75e-41,98;UBERON:0003061,2.75e-41,98;UBERON:0001434,2.06e-40,100;UBERON:0002193,3.11e-37,108;UBERON:0002204,4.09e-23,167;UBERON:0003081,1.71e-18,203;UBERON:0000926,8.25e-11,315;UBERON:0004120,8.25e-11,315;UBERON:0006603,8.25e-11,315;UBERON:0002384,1.10e-08,371 | |||
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|short_description=p@chr10:64495881..64495891,+ | |short_description=p@chr10:64495881..64495891,+ | ||
}} | }} |
Latest revision as of 14:42, 23 July 2015
Short description: | p@chr10:64495881..64495891, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:64495881..64495891, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.25e-101 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.25e-101 | 42 |
defensive cell | 3.98e-88 | 48 |
phagocyte | 3.98e-88 | 48 |
monopoietic cell | 5.89e-70 | 59 |
monocyte | 5.89e-70 | 59 |
monoblast | 5.89e-70 | 59 |
promonocyte | 5.89e-70 | 59 |
macrophage dendritic cell progenitor | 1.31e-67 | 61 |
myeloid lineage restricted progenitor cell | 2.33e-62 | 66 |
granulocyte monocyte progenitor cell | 2.12e-61 | 67 |
myeloid leukocyte | 5.28e-57 | 72 |
myeloid cell | 3.11e-37 | 108 |
common myeloid progenitor | 3.11e-37 | 108 |
nongranular leukocyte | 8.22e-35 | 115 |
hematopoietic lineage restricted progenitor cell | 2.98e-33 | 120 |
leukocyte | 5.04e-29 | 136 |
hematopoietic oligopotent progenitor cell | 4.40e-24 | 161 |
hematopoietic multipotent progenitor cell | 4.40e-24 | 161 |
hematopoietic stem cell | 5.84e-23 | 168 |
hematopoietic cell | 1.21e-21 | 177 |
mesenchymal cell | 2.93e-09 | 354 |
connective tissue cell | 5.13e-09 | 361 |
motile cell | 3.71e-08 | 386 |
multi fate stem cell | 4.21e-07 | 427 |
somatic stem cell | 5.89e-07 | 433 |
stem cell | 9.09e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.75e-54 | 76 |
bone element | 8.50e-50 | 82 |
skeletal element | 3.61e-45 | 90 |
immune system | 1.23e-43 | 93 |
hematopoietic system | 2.75e-41 | 98 |
blood island | 2.75e-41 | 98 |
skeletal system | 2.06e-40 | 100 |
hemolymphoid system | 3.11e-37 | 108 |
musculoskeletal system | 4.09e-23 | 167 |
lateral plate mesoderm | 1.71e-18 | 203 |
mesoderm | 8.25e-11 | 315 |
mesoderm-derived structure | 8.25e-11 | 315 |
presumptive mesoderm | 8.25e-11 | 315 |
connective tissue | 1.10e-08 | 371 |