FFCP PHASE1:Hg19::chr17:7750567..7750589,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:7750567..7750589,+
|short_description=p11@KDM6B
|description=CAGE_peak_11_at_KDM6B_5end
|association_with_transcript=-274bp_to_uc002gix.2_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23135 | |EntrezGene=23135 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29012 | |HGNC=29012 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-274bp_to_uc002gix.2_5end | |||
|cluster_id=chr17:7750567..7750589,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_11_at_KDM6B_5end | |||
|id=chr17:7750567..7750589,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.31e-29!42;CL:0000860!4.12e-28!45;CL:0000766!4.25e-25!76;CL:0000839!2.03e-22!70;CL:0000557!5.35e-22!71;CL:0002009!1.65e-18!65;CL:0002194!3.56e-18!63;CL:0000576!3.56e-18!63;CL:0000040!3.56e-18!63;CL:0000559!3.56e-18!63;CL:0000763!1.86e-14!112;CL:0000049!1.86e-14!112;CL:0000738!4.06e-14!140;CL:0002031!6.34e-13!124;CL:0002087!3.16e-10!119;CL:0000037!1.75e-09!172;CL:0000566!1.75e-09!172;CL:0002032!1.92e-09!165;CL:0000837!1.92e-09!165;CL:0000988!1.28e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.43e-73;33!CL:0002057;2.43e-73;33!CL:0000473;9.60e-51;39!CL:0000234;9.60e-51;39!CL:0000576;1.16e-34;48!CL:0000766;5.37e-29;69!CL:0000775;2.06e-20;3!CL:0000094;3.73e-13;8!CL:0000763;2.41e-12;100!CL:0002087;1.20e-09;104!CL:0000081;1.34e-09;11!CL:0000738;2.18e-09;136!CL:0002591;1.91e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.48e-68,42;CL:0002057,4.48e-68,42;CL:0000766,9.58e-63,72;CL:0000473,5.00e-59,48;CL:0000234,5.00e-59,48;CL:0000839,2.06e-49,66;CL:0000557,1.28e-48,67;CL:0002194,2.36e-46,59;CL:0000576,2.36e-46,59;CL:0000040,2.36e-46,59;CL:0000559,2.36e-46,59;CL:0002009,1.02e-44,61;CL:0000763,2.29e-40,108;CL:0000049,2.29e-40,108;CL:0000738,4.48e-31,136;CL:0002032,1.74e-25,161;CL:0000837,1.74e-25,161;CL:0002031,2.86e-25,120;CL:0000037,3.24e-24,168;CL:0000988,9.94e-23,177;CL:0002087,7.57e-22,115;CL:0000775,2.00e-20,3;CL:0000094,3.80e-13,8;CL:0000081,1.36e-09,11;CL:0000134,9.55e-09,354;CL:0002320,1.80e-08,361;CL:0000219,1.66e-07,386;CL:0000034,1.94e-07,441;CL:0002591,2.80e-07,1;CL:0000048,4.52e-07,427;CL:0000723,6.76e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.17e-49;42!CL:0000049;1.70e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.90e-18!102;UBERON:0003061!6.90e-18!102;UBERON:0002371!7.57e-18!80;UBERON:0001474!2.20e-16!86;UBERON:0002193!1.79e-15!112;UBERON:0004765!1.43e-12!101;UBERON:0001434!1.43e-12!101;UBERON:0002405!4.54e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.15e-42,76;UBERON:0001474,5.43e-39,82;UBERON:0004765,3.74e-35,90;UBERON:0002405,6.99e-34,93;UBERON:0002390,6.21e-32,98;UBERON:0003061,6.21e-32,98;UBERON:0001434,3.30e-31,100;UBERON:0002193,1.43e-28,108;UBERON:0002204,1.55e-18,167;UBERON:0003081,7.56e-16,203;UBERON:0000926,1.99e-08,315;UBERON:0004120,1.99e-08,315;UBERON:0006603,1.99e-08,315;UBERON:0002384,4.25e-08,371 | |||
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| ||
|short_description=p11@KDM6B | |||
}} | }} |
Latest revision as of 01:45, 18 September 2015
Short description: | p11@KDM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_KDM6B_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -274bp_to_uc002gix.2_5end |
EntrezGene: | KDM6B |
HGNC: | 29012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.15e-42 | 76 |
bone element | 5.43e-39 | 82 |
skeletal element | 3.74e-35 | 90 |
immune system | 6.99e-34 | 93 |
hematopoietic system | 6.21e-32 | 98 |
blood island | 6.21e-32 | 98 |
skeletal system | 3.30e-31 | 100 |
hemolymphoid system | 1.43e-28 | 108 |
musculoskeletal system | 1.55e-18 | 167 |
lateral plate mesoderm | 7.56e-16 | 203 |
mesoderm | 1.99e-08 | 315 |
mesoderm-derived structure | 1.99e-08 | 315 |
presumptive mesoderm | 1.99e-08 | 315 |
connective tissue | 4.25e-08 | 371 |