FFCP PHASE1:Hg19::chr17:78807170..78807198,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:78807170..78807198,+
|short_description=p@chr17:78807170..78807198,+
|description=CAGE_peak_at_chr17:78807170..78807198,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:78807170..78807198,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr17:78807170..78807198,+ | |||
|id=chr17:78807170..78807198,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.88e-31!42;CL:0000860!1.76e-27!45;CL:0002194!4.89e-18!63;CL:0000576!4.89e-18!63;CL:0000040!4.89e-18!63;CL:0000559!4.89e-18!63;CL:0002009!6.20e-17!65;CL:0000766!5.45e-16!76;CL:0000839!1.74e-15!70;CL:0000557!5.07e-15!71;CL:0000738!3.45e-09!140;CL:0002087!3.94e-09!119;CL:0000763!5.64e-08!112;CL:0000049!5.64e-08!112;CL:0000034!9.69e-08!444;CL:0000134!1.09e-07!358;CL:0000048!1.23e-07!430;CL:0002320!1.35e-07!365;CL:0000723!1.48e-07!436;CL:0000219!1.53e-07!390;CL:0002031!5.57e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.52e-78;33!CL:0002057;2.52e-78;33!CL:0000473;2.63e-56;39!CL:0000234;2.63e-56;39!CL:0000576;2.83e-45;48!CL:0000766;2.32e-28;69!CL:0000763;5.29e-13;100!CL:0002087;1.26e-11;104!CL:0000767;5.11e-09;3!CL:0002582;1.38e-08;3!CL:0002393;4.05e-08;6!CL:0002397;4.05e-08;6!CL:0000738;1.40e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.87e-84,42;CL:0002057,1.87e-84,42;CL:0000473,8.28e-77,48;CL:0000234,8.28e-77,48;CL:0002194,2.61e-59,59;CL:0000576,2.61e-59,59;CL:0000040,2.61e-59,59;CL:0000559,2.61e-59,59;CL:0002009,4.71e-57,61;CL:0000766,1.44e-55,72;CL:0000839,5.29e-52,66;CL:0000557,4.41e-51,67;CL:0000763,1.61e-33,108;CL:0000049,1.61e-33,108;CL:0002087,5.54e-29,115;CL:0000738,1.80e-27,136;CL:0002031,3.78e-24,120;CL:0000037,3.85e-20,168;CL:0002032,5.34e-19,161;CL:0000837,5.34e-19,161;CL:0000988,1.46e-18,177;CL:0002320,1.04e-14,361;CL:0000134,1.67e-14,354;CL:0000219,9.66e-13,386;CL:0000034,3.47e-12,441;CL:0000048,1.40e-11,427;CL:0000723,3.21e-11,433;CL:0000767,3.66e-09,3;CL:0002582,1.71e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.87e-61;42!CL:0000049;4.11e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.24e-16!80;UBERON:0001474!4.11e-15!86;UBERON:0004765!2.38e-13!101;UBERON:0001434!2.38e-13!101;UBERON:0002390!2.58e-12!102;UBERON:0003061!2.58e-12!102;UBERON:0002193!1.83e-10!112;UBERON:0002204!1.55e-09!167;UBERON:0002405!8.13e-09!115;UBERON:0002384!2.51e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.82e-52,76;UBERON:0001474,7.00e-50,82;UBERON:0004765,9.01e-47,90;UBERON:0002390,3.88e-42,98;UBERON:0003061,3.88e-42,98;UBERON:0001434,5.40e-41,100;UBERON:0002405,2.36e-40,93;UBERON:0002193,3.26e-37,108;UBERON:0002204,1.63e-22,167;UBERON:0003081,1.00e-18,203;UBERON:0002384,6.22e-14,371;UBERON:0000926,2.99e-11,315;UBERON:0004120,2.99e-11,315;UBERON:0006603,2.99e-11,315 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0,0.612002073732759,0,0,0,0,0.0764134057479513,0.0821005894499457,0,3.14691421479123,1.91914699048606,4.64448369948228,0,0,0,0,0,0.293600439334847,16.6198622559563,10.6288557159175,11.718587018656,0,0,0,2.76256653681173,2.64513160582167,2.18325655069035,9.76201955003875,11.9238687526329,14.2464930611748,49.770783871732,29.7146419573757,33.1075121844019,28.2691458204027,20.6555098746824,13.5426486594342,6.02375486536335,4.63940455098338,8.53949240891322,34.587479837912,14.7627352455003,21.0981251513684,10.8850929061616,8.7764009353518,3.40979800426155,11.8985787837719,8.5107783703671,8.71951148593805,25.6273638561878,27.6385946762707,24.9767171410884,4.23779651843358,5.52416453981347,10.1267963981083,0.211255286311942,1.70083439972035,0.838634582033504,1.46027220490444,1.05123824989054,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,3.96513985737078,2.24203425192614,0,0.196709770113833,0.393010762749165,0.205601498999509,0.334372990781356,0,0,0,0,0,0,0,0.25618263945135,0.390178042679635,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0.298897361103602,0.117434498643765,0.485618833104395,0.140450806702248,0.61246251376468,1.10550885580591,0.206651562351531,0,0.494533858557114,0,0,0.336672227908132,0.500474079487857,0,0,0.30648779579902,0.300476117813194,0,0,0,0.211931901159562,0,0.206105058476878,0,0.37223371266318,0.168776332241266,0,0.252433774244115,0,0.484938170456436,0.710019185033229,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0.337169380156203,0,0,0.217879444092406,0,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0,0,0.190493682876507,0.381988425558278,0,1.71072446022705,0,0,0.285826432630578,0.224262168690721,0,0,0,0,0.845302752556,0.797814349754612,0,0,1.41849132023278,0.266422179016099,0.57191197463259,0,0.823240336780769,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0.289562613335158,0,0,0.112085143993527,0.788123040807709,0.646882724578552,0.256686072559497,0,0,0.773288812777695,0,1.27587750330633,0,0,0,0,1.00034104211935,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0.347534457872331,0,0,0.413536052245775,2.37285620900479,1.81436848265855,0,0,0,0.248107807818777,0,0,0.256278298511402,0,0,0,0.308419387605311,1.24293207719189,1.06765302817952,2.07701771673448,1.39452454151951,0,0,0,0.229628896329213,1.0925470080403,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0.460511024178389,0.413509717453592,0.107420244868274,0.290033387828457,0.511359764496605,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0.95460974377781,0.78494864019923,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,1.05650146756755,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0.573645408816206,0,0,1.06428319221179,0,0,0.75894634753143,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.398495976502139,0,0.251932747854276,0,0.246169610922139,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,3.54296554325536,0,0,0,0,0.438770794307945,0,0,0.153900517007594,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0.235694034616795,0.135904206073614,0,0.101998217636322,0,1.80126086612937,0.547621515567972,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0.681552087141687,0.113312091520126,0,0,1.0342636508924,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.500763722825999,0,0.776503360757966,0.18628920882415,0,0,0,0,0.235265819698172,0.468334905806882,0,1.19403842309499,0.701139929541673,2.77402930751307,1.13641803165053,0.50313580350515,1.77962244319307,2.51724075236616,1.96600200892211,1.39893480524502,0.591420599958536,0,0,0.155262956876259,0.829412415681711,0.265841714557995,0,0.300515217994437,0,0.406870733204662,0.909243296012797,0.107410557042488,0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| ||
|short_description=p@chr17:78807170..78807198,+ | |||
}} | }} |
Latest revision as of 22:33, 25 July 2015
Short description: | p@chr17:78807170..78807198, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:78807170..78807198, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.87e-84 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.87e-84 | 42 |
defensive cell | 8.28e-77 | 48 |
phagocyte | 8.28e-77 | 48 |
monopoietic cell | 2.61e-59 | 59 |
monocyte | 2.61e-59 | 59 |
monoblast | 2.61e-59 | 59 |
promonocyte | 2.61e-59 | 59 |
macrophage dendritic cell progenitor | 4.71e-57 | 61 |
myeloid leukocyte | 1.44e-55 | 72 |
myeloid lineage restricted progenitor cell | 5.29e-52 | 66 |
granulocyte monocyte progenitor cell | 4.41e-51 | 67 |
myeloid cell | 1.61e-33 | 108 |
common myeloid progenitor | 1.61e-33 | 108 |
nongranular leukocyte | 5.54e-29 | 115 |
leukocyte | 1.80e-27 | 136 |
hematopoietic lineage restricted progenitor cell | 3.78e-24 | 120 |
hematopoietic stem cell | 3.85e-20 | 168 |
hematopoietic oligopotent progenitor cell | 5.34e-19 | 161 |
hematopoietic multipotent progenitor cell | 5.34e-19 | 161 |
hematopoietic cell | 1.46e-18 | 177 |
connective tissue cell | 1.04e-14 | 361 |
mesenchymal cell | 1.67e-14 | 354 |
motile cell | 9.66e-13 | 386 |
stem cell | 3.47e-12 | 441 |
multi fate stem cell | 1.40e-11 | 427 |
somatic stem cell | 3.21e-11 | 433 |
basophil | 3.66e-09 | 3 |
visceral preadipocyte | 1.71e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.82e-52 | 76 |
bone element | 7.00e-50 | 82 |
skeletal element | 9.01e-47 | 90 |
hematopoietic system | 3.88e-42 | 98 |
blood island | 3.88e-42 | 98 |
skeletal system | 5.40e-41 | 100 |
immune system | 2.36e-40 | 93 |
hemolymphoid system | 3.26e-37 | 108 |
musculoskeletal system | 1.63e-22 | 167 |
lateral plate mesoderm | 1.00e-18 | 203 |
connective tissue | 6.22e-14 | 371 |
mesoderm | 2.99e-11 | 315 |
mesoderm-derived structure | 2.99e-11 | 315 |
presumptive mesoderm | 2.99e-11 | 315 |