FFCP PHASE1:Hg19::chr11:1774825..1774836,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1774825..1774836,- | |||
|coexpression_cluster_id=C71 | |coexpression_cluster_id=C71 | ||
|description=CAGE_peak_at_chr11:1774825..1774836,- | |description=CAGE_peak_at_chr11:1774825..1774836,- | ||
|id=chr11:1774825..1774836,- | |id=chr11:1774825..1774836,- | ||
|ontology_enrichment_celltype=CL:0000839!1.47e-18!70;CL:0000557!2.46e-18!71;CL:0002194!1.34e-16!63;CL:0000576!1.34e-16!63;CL:0000040!1.34e-16!63;CL:0000559!1.34e-16!63;CL:0002009!1.74e-16!65;CL:0000766!5.94e-15!76;CL:0002057!8.17e-14!42;CL:0000860!3.77e-13!45 | |ontology_enrichment_celltype=CL:0000839!1.47e-18!70;CL:0000557!2.46e-18!71;CL:0002194!1.34e-16!63;CL:0000576!1.34e-16!63;CL:0000040!1.34e-16!63;CL:0000559!1.34e-16!63;CL:0002009!1.74e-16!65;CL:0000766!5.94e-15!76;CL:0002057!8.17e-14!42;CL:0000860!3.77e-13!45 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.21e-25;39!CL:0000234;1.21e-25;39!CL:0000860;7.65e-24;33!CL:0002057;7.65e-24;33!CL:0000576;4.42e-14;48!CL:0000766;3.60e-12;69!CL:0000235;6.37e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,9.13e-31,66;CL:0000557,4.76e-30,67;CL:0000766,4.76e-28,72;CL:0002194,1.96e-27,59;CL:0000576,1.96e-27,59;CL:0000040,1.96e-27,59;CL:0000559,1.96e-27,59;CL:0000473,1.35e-26,48;CL:0000234,1.35e-26,48;CL:0002009,4.91e-26,61;CL:0000860,3.95e-20,42;CL:0002057,3.95e-20,42;CL:0000763,1.68e-15,108;CL:0000049,1.68e-15,108;CL:0002031,6.37e-10,120;CL:0002320,1.14e-09,361;CL:0000134,1.86e-09,354;CL:0000219,2.16e-09,386;CL:0000235,7.32e-09,6;CL:0000738,1.03e-07,136;CL:0002087,1.53e-07,115;CL:0000097,9.11e-07,5;CL:0002028,9.11e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.43e-15;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.49e-16!80;UBERON:0001474!1.43e-15!86;UBERON:0002405!9.11e-14!115;UBERON:0004765!2.13e-13!101;UBERON:0001434!2.13e-13!101;UBERON:0002390!4.66e-10!102;UBERON:0003061!4.66e-10!102;UBERON:0002193!7.13e-10!112;UBERON:0002204!6.06e-08!167;UBERON:0000468!7.85e-08!659;UBERON:0000062!1.60e-07!511 | |ontology_enrichment_uberon=UBERON:0002371!2.49e-16!80;UBERON:0001474!1.43e-15!86;UBERON:0002405!9.11e-14!115;UBERON:0004765!2.13e-13!101;UBERON:0001434!2.13e-13!101;UBERON:0002390!4.66e-10!102;UBERON:0003061!4.66e-10!102;UBERON:0002193!7.13e-10!112;UBERON:0002204!6.06e-08!167;UBERON:0000468!7.85e-08!659;UBERON:0000062!1.60e-07!511 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.61e-28,76;UBERON:0001474,3.85e-26,82;UBERON:0004765,2.13e-23,90;UBERON:0001434,2.71e-22,100;UBERON:0002405,3.87e-22,93;UBERON:0002390,2.87e-19,98;UBERON:0003061,2.87e-19,98;UBERON:0002193,1.29e-17,108;UBERON:0002204,1.75e-13,167;UBERON:0003081,3.79e-12,203;UBERON:0000926,1.45e-11,315;UBERON:0004120,1.45e-11,315;UBERON:0006603,1.45e-11,315;UBERON:0002384,1.09e-08,371 | |||
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|phase1_expression=0.726713517082227,9.63452357509424,2.25527046553554,4.00293193412522,1.34088328328186,1.74467704820074,2.53299878168311,2.52687949370732,1.56711376919903,0,2.79120467188971,0,0,0.247532705920093,0.662794751455832,0,0,1.46062018077475,0,0.123121058076788,1.22400414746552,0.626909442956176,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0.154816123316076,2.75826367343678,0.30120591877825,1.47901604066715,0,0,0,0.553995408531877,1.80490002723128,0.651032612147555,2.46307021663917,8.74512898251245,3.8636335145128,9.74168199823083,5.66813915533214,2.18325655069035,7.43772918098191,5.34518254428373,2.16794459626573,4.02769349251011,1.2808035326455,1.18241114944293,2.75796544589295,1.93645405075148,2.70852973188684,10.7298133539285,7.09555990150399,3.59557575112135,7.34601341690166,1.28371610830437,1.27867425159808,5.60747210317417,3.59034583718937,1.70489900213078,8.41606792022894,1.70215567407342,0.622822248995575,6.02996796616184,2.60741459210101,1.52032191293582,6.65939452896706,4.05105399586321,1.26584954976354,0.211255286311942,0.425208599930087,0,0.898629049171961,1.95229960693958,0.16072558669708,0,0.99458338599545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0.221533894583621,0,0.384273959177026,0.260118695119756,0.164437904603676,0,0.289803085735052,0.296573126324121,0,1.04535523804977,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0,0.361439152384566,0,1.44846518960824,0.795285947051099,1.94653948121054,0.283604451492204,0.886917589850256,0.527008714158756,0.392937226493138,0,0,1.29818957461873,1.74129737299267,5.7171923023112,0.238490624305342,0,0,0.198762407366705,0,0,0.56530794192401,0.419499436209906,0.550236083880135,0,0.258416759169329,0,0.33472061276467,0,0,1.22031028774085,0.367663080345869,0.81014194788176,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0.872188104285069,0,1.13967460498122,0.794455084879313,1.43418310374407,1.41867352879343,0.560677600142307,0,2.96001058100592,0,0.67355336034844,0.326923806226917,0.151357427644931,2.30470369792,0.468642863667593,0.624320153660641,0,0.597794722207204,0.352303495931295,0.161872944368132,0.140450806702248,0,0.61417158655884,0.309977343527296,0,1.97813543422845,1.82032272387605,1.43723628363248,0,0.250237039743928,0,0.438977620880838,0.30648779579902,1.20190447125277,0.226864366320042,0.358779271377724,0,0,0.600182192168805,0.309157587715317,0.257640540045629,0.37223371266318,0,0.389748020644795,0.252433774244115,0.552299391853796,0.80823028409406,0.355009592516614,0.302256294682921,0,0.193260853163297,0,0,0.365921118388786,0.132529768321485,0.580969714347592,0.518305275076852,1.00928340350251,0.36497735907583,0,3.21620469096443,0,0,0,0.236613600079688,1.01150814046861,0.482022059766964,0.55146986366197,0.653638332277218,0,1.34831308160164,0.588664395376038,0.769494313892781,3.69077727312324,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0.983907508344908,0.171567810298526,0.768251997860379,0,0.502644862058154,0.370353780634118,0,1.03993478527958,0,0.115930404975077,0.117408694235822,0.433099343283221,0,0.761016608938393,2.37061319387782,2.57545848628462,3.20082107913617,3.04205544681009,6.98566462757023,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0.766765358330422,2.46331618947972,3.16974362447614,4.35389042635621,1.8735593944205,4.29224273649692,0.380987365753014,4.58386110669933,3.51652341630141,1.71072446022705,1.13110241973656,1.50171528921959,2.28661146104463,0,0.87192013766656,0.1466765716419,0.258543431515556,0,0.845302752556,1.59562869950922,0,0,0,0.266422179016099,0,0,0,0,1.06617584622764,0,0.602878754119172,0.871533458600294,1.89948683245908,32.8384207731214,46.2076524117556,69.5752000294004,0,0,1.42636905040718,0.289562613335158,1.43833425785268,0.179060963239896,0.112085143993527,0,0.646882724578552,0.898401253958239,0.76228387266739,0,0,0.502548796003046,0.637938751653163,1.49801404789436,0,0,0.24538298343828,2.00068208423871,0.813795071099207,0.207970861530807,0.713715955188647,0.157702415033935,0.468565659970853,0.601892199455438,18.1926003244788,2.0694614258501,0,0.184369168541703,0.434418072340414,0.195801157462741,2.74514739048685,0,0.862856803274467,0.213455115606889,0,3.32870879020994,0.30239029332968,0.496215615637554,0.61384789315225,2.24528075546459,1.79394808957981,1.02341449813341,0.804269605718038,0,0,0.532685175939381,0,1.55776328755086,0.348631135379878,0.725156697549733,11.6293752775905,2.67034867914099,0.34444334449382,1.82091168006717,3.01586154406675,0.451199612907412,0.231046011313244,0,1.46139224653261,0.527758144464379,2.27466768141793,1.02056223165909,0.431831832204279,1.54227252690289,0,1.00337954770971,0,0,0.447749509444357,0.657779629937804,0,0.512900250232778,0.984043937099117,0.976135183992909,0.618246069886334,0.732555718546747,0.577566499444116,0.574265537996172,0.650060246036521,0,0.386682873168488,0.308097234229289,0.614014698904518,0.137836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| ||
|short_description=p@chr11:1774825..1774836,- | |short_description=p@chr11:1774825..1774836,- | ||
}} | }} |
Latest revision as of 20:31, 23 July 2015
Short description: | p@chr11:1774825..1774836, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1774825..1774836, - |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 9.13e-31 | 66 |
granulocyte monocyte progenitor cell | 4.76e-30 | 67 |
myeloid leukocyte | 4.76e-28 | 72 |
monopoietic cell | 1.96e-27 | 59 |
monocyte | 1.96e-27 | 59 |
monoblast | 1.96e-27 | 59 |
promonocyte | 1.96e-27 | 59 |
defensive cell | 1.35e-26 | 48 |
phagocyte | 1.35e-26 | 48 |
macrophage dendritic cell progenitor | 4.91e-26 | 61 |
classical monocyte | 3.95e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.95e-20 | 42 |
myeloid cell | 1.68e-15 | 108 |
common myeloid progenitor | 1.68e-15 | 108 |
hematopoietic lineage restricted progenitor cell | 6.37e-10 | 120 |
connective tissue cell | 1.14e-09 | 361 |
mesenchymal cell | 1.86e-09 | 354 |
motile cell | 2.16e-09 | 386 |
macrophage | 7.32e-09 | 6 |
leukocyte | 1.03e-07 | 136 |
nongranular leukocyte | 1.53e-07 | 115 |
mast cell | 9.11e-07 | 5 |
basophil mast progenitor cell | 9.11e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.61e-28 | 76 |
bone element | 3.85e-26 | 82 |
skeletal element | 2.13e-23 | 90 |
skeletal system | 2.71e-22 | 100 |
immune system | 3.87e-22 | 93 |
hematopoietic system | 2.87e-19 | 98 |
blood island | 2.87e-19 | 98 |
hemolymphoid system | 1.29e-17 | 108 |
musculoskeletal system | 1.75e-13 | 167 |
lateral plate mesoderm | 3.79e-12 | 203 |
mesoderm | 1.45e-11 | 315 |
mesoderm-derived structure | 1.45e-11 | 315 |
presumptive mesoderm | 1.45e-11 | 315 |
connective tissue | 1.09e-08 | 371 |