FFCP PHASE1:Hg19::chr12:122239809..122239841,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-461bp_to_ENST00000535614_5end | |association_with_transcript=-461bp_to_ENST00000535614_5end | ||
|cluster_id=chr12:122239809..122239841,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_2_at_ENST00000535614_5end | |description=CAGE_peak_2_at_ENST00000535614_5end | ||
|id=chr12:122239809..122239841,- | |id=chr12:122239809..122239841,- | ||
|ontology_enrichment_celltype=CL:0000838!2.80e-14!52;CL:0000084!3.18e-14!25;CL:0000827!3.18e-14!25;CL:0000542!1.09e-13!53;CL:0000051!1.09e-13!53;CL:0000791!1.85e-13!18;CL:0000789!1.85e-13!18;CL:0002420!1.85e-13!18;CL:0002419!1.85e-13!18;CL:0000790!1.85e-13!18;CL:0000625!4.82e-10!11;CL:0000738!2.39e-08!140;CL:0002031!7.69e-07!124;CL:0002087!8.04e-07!119;CL:0000037!9.83e-07!172;CL:0000566!9.83e-07!172 | |ontology_enrichment_celltype=CL:0000838!2.80e-14!52;CL:0000084!3.18e-14!25;CL:0000827!3.18e-14!25;CL:0000542!1.09e-13!53;CL:0000051!1.09e-13!53;CL:0000791!1.85e-13!18;CL:0000789!1.85e-13!18;CL:0002420!1.85e-13!18;CL:0002419!1.85e-13!18;CL:0000790!1.85e-13!18;CL:0000625!4.82e-10!11;CL:0000738!2.39e-08!140;CL:0002031!7.69e-07!124;CL:0002087!8.04e-07!119;CL:0000037!9.83e-07!172;CL:0000566!9.83e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000791;9.87e-41;18!CL:0000789;9.87e-41;18!CL:0002419;9.87e-41;18!CL:0000084;8.39e-35;25!CL:0000625;2.39e-28;11!CL:0000624;1.18e-16;6!CL:0000542;2.63e-15;53!CL:0000898;3.25e-09;3!CL:0000226;1.10e-08;3!CL:0000842;1.10e-08;3!CL:0000623;6.64e-08;3!CL:0000815;7.14e-07;2!CL:0000792;7.14e-07;2!CL:0002677;7.14e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.82e-41,18;CL:0000789,5.82e-41,18;CL:0002420,5.82e-41,18;CL:0002419,5.82e-41,18;CL:0000790,5.82e-41,18;CL:0000084,7.17e-35,25;CL:0000827,7.17e-35,25;CL:0000625,1.71e-28,11;CL:0000838,1.91e-27,52;CL:0000542,8.70e-27,53;CL:0000051,8.70e-27,53;CL:0000624,9.45e-17,6;CL:0002087,2.50e-12,115;CL:0000738,5.75e-11,136;CL:0002031,2.29e-10,120;CL:0000898,2.51e-09,3;CL:0000226,8.85e-09,3;CL:0000842,8.85e-09,3;CL:0000037,4.01e-08,168;CL:0000623,5.59e-08,3;CL:0000825,5.59e-08,3;CL:0000988,2.51e-07,177;CL:0000815,6.67e-07,2;CL:0000792,6.67e-07,2;CL:0002677,6.67e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;9.87e-41;18!CL:0000051;2.63e-15;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.15e-11!15;UBERON:0000179!2.15e-11!15;UBERON:0000463!2.15e-11!15 | |ontology_enrichment_uberon=UBERON:0000178!2.15e-11!15;UBERON:0000179!2.15e-11!15;UBERON:0000463!2.15e-11!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.55e-23;15!UBERON:0000179;4.55e-23;15!UBERON:0000463;4.55e-23;15!UBERON:0002390;2.28e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.63e-23,15;UBERON:0000179,3.63e-23,15;UBERON:0000463,3.63e-23,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0.626909442956176,0,0.410623275218653,0.125542639594803,0.152826811495903,0.246301768349837,0.0787107813136792,0.786728553697808,0.383829398097213,0.309632246632152,0,0.6024118375565,0.369754010166788,0,0,0.293600439334847,0.553995408531877,0.802177789880567,0.651032612147555,0,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0,0.28769239232215,0,0,0,1.29096936716765,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0.16072558669708,0,0,0,3.51992488922645,0.546138611262131,0.889509253863555,0,0.400395987036012,1.14950487990897,0.661044872784862,2.86216126360609,0,0,1.14681968437569,1.32171328579026,0.560508562981536,0.263384084775077,5.90129310341499,6.6811829667358,3.08402248499264,5.51715434789238,11.0813570655421,13.2565385605725,21.4309401248702,3.00808233589969,5.89211814949674,6.42448294292501,10.8321545506006,5.37983542847836,5.20237390239513,2.13769275984779,4.14525026678773,2.31842468588042,9.49034004237187,8.82884732696053,12.5442628565972,0.793165398882963,3.83220493601921,2.74901956386104,6.57851199250707,6.68987370080603,3.90650072313851,6.65316431113862,3.61380285786655,5.11946444617674,4.99722906209383,4.73554504088034,3.28451198768419,3.83052812126992,2.40696176205157,6.51709817472595,0,0,0,0,0,0.144846518960824,0,0,0,0,0.263504357079378,0.196468613246569,0,0.370784442784429,0.324547393654683,0,0,0,0.571994910780128,0,0.993812036833525,1.72046919021225,1.04142150482278,0,0.419499436209906,0.275118041940067,1.25396979922086,0,0,0.33472061276467,2.81980521976403,0,1.46437234528902,0,0,0.625098097988558,0.898117490504679,0.225222960966644,3.06633274931766,1.89853131913626,0.549605231791222,0,0,0,0,0.12663051166458,0.662045904066094,0.286836620748814,0,0,2.1349799145941,0,0,0.538842688278752,0.490385709340376,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0.515281080091258,0,0,0,0.252433774244115,0,0.323292113637624,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0.286804595389004,0.243947412259191,0.265059536642971,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0.38474715694639,0.738155454624648,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.433099343283221,0.462985512576611,0.951270761172991,0.790204397959275,0,0,0,0.148631162288728,0,0.335964256397719,0,0,0,0,1.47798971368783,0.352193736052904,0.414656231081544,1.8735593944205,0.88369703398466,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.94064817373566,3.59360501583295,0,1.30139853857622,0,0.670065061337395,0,0,0,0.414415513436035,0,0,0,0.207970861530807,0.535286966391485,0.315404830067869,0,0,0,0,0,0,0.0868836144680828,0,0,2.89475236572042,5.39285502046542,3.52200940751366,0,0,0,0,0.767309866440312,0,0,0,0,1.48418066444991,0,0.177561725313127,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0.340187410553031,0.215915916102139,1.54227252690289,0,0,0,0.831076008928724,0,0.219259876645935,0,0,0.328014645699706,0,0.206082023295445,0.0915694648183434,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,2.29702882490251,0.30347334256665,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,2.11300293513511,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,3.26672954583968,0.0941438007767792,0.43050537267123,0,0.443430153536676,0.229723400206959,5.07447609232169,3.82318603571188,3.41788312304498,2.85878130549347,3.29089818468955,2.59389324477087,3.7802200606668,3.17250070517708,0.213648142254946,0.962479855263359,0.245040215981032,0,0,0.426851060090485,0.159426272728822,0.199579371432817,0.5745161103971,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0,0.33307196799782,2.81974010175699,0,0,0.36408156524854,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0.398495976502139,1.10513566212459,0,0.306806047506464,0.369254416383208,0.311039587661807,0,0,0,0.197286811273867,4.7896618469388,0,0,0.0927680981618513,0,0,0,0,0.568967241427498,0,0,0,0.583209226766509,0,0,0,1.52581736317083,0.552896299656123,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0.108647371922008,0,0.0915975934018623,0,1.02193298195737,0.627921025580099,0,0,0,0.335643173951685,0,0.476809736941136,0,0,0,0,0,0,0,0.296521128680622,0.494255755786011,0.835375596043643,0.134802265961354,0,0.234264445725339,0.364909578431332,0.19566461893209,0.242780379534093,0,1.20990716048664,0,0.63186579628488,0,0.103688191397247,0,0,0,0,0,0.277349346026277,0,0.195984794828755,0,0,0,0.0967563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| ||
|short_description=p2@ENST00000535614 | |short_description=p2@ENST00000535614 | ||
}} | }} |
Latest revision as of 06:00, 24 July 2015
Short description: | p2@ENST00000535614 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000535614_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -461bp_to_ENST00000535614_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.82e-41 | 18 |
alpha-beta T cell | 5.82e-41 | 18 |
immature T cell | 5.82e-41 | 18 |
mature T cell | 5.82e-41 | 18 |
immature alpha-beta T cell | 5.82e-41 | 18 |
T cell | 7.17e-35 | 25 |
pro-T cell | 7.17e-35 | 25 |
CD8-positive, alpha-beta T cell | 1.71e-28 | 11 |
lymphoid lineage restricted progenitor cell | 1.91e-27 | 52 |
lymphocyte | 8.70e-27 | 53 |
common lymphoid progenitor | 8.70e-27 | 53 |
CD4-positive, alpha-beta T cell | 9.45e-17 | 6 |
nongranular leukocyte | 2.50e-12 | 115 |
leukocyte | 5.75e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 2.29e-10 | 120 |
naive T cell | 2.51e-09 | 3 |
single nucleate cell | 8.85e-09 | 3 |
mononuclear cell | 8.85e-09 | 3 |
hematopoietic stem cell | 4.01e-08 | 168 |
natural killer cell | 5.59e-08 | 3 |
pro-NK cell | 5.59e-08 | 3 |
hematopoietic cell | 2.51e-07 | 177 |
regulatory T cell | 6.67e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.67e-07 | 2 |
naive regulatory T cell | 6.67e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.63e-23 | 15 |
haemolymphatic fluid | 3.63e-23 | 15 |
organism substance | 3.63e-23 | 15 |