FFCP PHASE1:Hg19::chr12:66696231..66696253,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92797 | |EntrezGene=92797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17196 | |HGNC=17196 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NG08 | |UniProt=Q8NG08 | ||
|association_with_transcript=-71bp_to_ENST00000247815_5end | |association_with_transcript=-71bp_to_ENST00000247815_5end | ||
|cluster_id=chr12:66696231..66696253,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_3_at_HELB_5end | |description=CAGE_peak_3_at_HELB_5end | ||
|id=chr12:66696231..66696253,+ | |id=chr12:66696231..66696253,+ | ||
|ontology_enrichment_celltype=CL:0000791!4.49e-11!18;CL:0000789!4.49e-11!18;CL:0002420!4.49e-11!18;CL:0002419!4.49e-11!18;CL:0000790!4.49e-11!18;CL:0000084!3.11e-10!25;CL:0000827!3.11e-10!25;CL:0000625!8.89e-09!11;CL:0000542!1.48e-08!53;CL:0000051!1.48e-08!53;CL:0000838!1.64e-08!52 | |ontology_enrichment_celltype=CL:0000791!4.49e-11!18;CL:0000789!4.49e-11!18;CL:0002420!4.49e-11!18;CL:0002419!4.49e-11!18;CL:0000790!4.49e-11!18;CL:0000084!3.11e-10!25;CL:0000827!3.11e-10!25;CL:0000625!8.89e-09!11;CL:0000542!1.48e-08!53;CL:0000051!1.48e-08!53;CL:0000838!1.64e-08!52 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.55e-25;18!CL:0000789;4.55e-25;18!CL:0002419;4.55e-25;18!CL:0000084;1.15e-23;25!CL:0000625;1.43e-19;11!CL:0000624;7.15e-09;6!CL:0000815;1.17e-07;2!CL:0000792;1.17e-07;2!CL:0002677;1.17e-07;2!CL:0000542;1.79e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.50e-25,18;CL:0000789,3.50e-25,18;CL:0002420,3.50e-25,18;CL:0002419,3.50e-25,18;CL:0000790,3.50e-25,18;CL:0000084,8.69e-24,25;CL:0000827,8.69e-24,25;CL:0000625,3.04e-19,11;CL:0000838,1.15e-14,52;CL:0000542,2.61e-14,53;CL:0000051,2.61e-14,53;CL:0000624,2.84e-09,6;CL:0000815,6.07e-08,2;CL:0000792,6.07e-08,2;CL:0002677,6.07e-08,2;CL:0002087,1.71e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;4.55e-25;18!CL:0000051;1.79e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.89e-21;15!UBERON:0000179;5.89e-21;15!UBERON:0000463;5.89e-21;15!UBERON:0002390;1.05e-11;32!UBERON:0002193;5.17e-08;42!UBERON:0002370;1.17e-07;2!UBERON:0005058;1.17e-07;2!UBERON:0009113;1.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.27e-21,15;UBERON:0000179,3.27e-21,15;UBERON:0000463,3.27e-21,15 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.572471974262113,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0.383829398097213,0,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0.601633342410425,0,0.671746422719773,0.971680998056939,0,0,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0,1.08594422352558,0,0,0.632924774881769,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0.546138611262131,0,1.70692089026603,0,0.574752439954483,1.32208974556972,0,0,0.587237189370939,0,0,0.560508562981536,1.05353633910031,0.983548850569165,1.96505381374582,1.43921049299656,0.167186495390678,2.60737813306872,3.78758244587787,1.94826728407911,0.557052284425868,1.76763544484902,2.43687284041983,1.35401931882508,0.896639238079726,1.1705341280389,0.657751618414705,0.552700035571697,0.579606171470105,2.96573126324121,8.02622484269139,3.1360657141493,0.679856056185397,0.383220493601921,1.03088233644789,1.26509846009751,6.68987370080603,5.20866763085135,0.950452044448374,4.51725357233318,5.88738411310325,11.2437653897111,5.20909954496837,0.821127996921047,1.00803371612366,1.06976078313403,0.579297615531196,0,0,0.12786256184353,0,0,0.144846518960824,0.795285947051099,0,0,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0.174129737299267,0.26591592103773,1.19245312152671,1.71598473234038,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0.673588117878509,0.225222960966644,0,0,0.549605231791222,0,0,0,0,0.12663051166458,0.662045904066094,0.860509862246441,0.354668382198357,0,0,0,0.933633106199299,0.269421344139376,0,0.302714855289863,0.576175924479999,0.234321431833797,0,0.570471821544449,0.149448680551801,0.469737994575059,0.161872944368132,0.280901613404497,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0,0.250237039743928,0.277064115484183,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0,0.292311015483596,0.757301322732344,0.552299391853796,0.161646056818812,0.355009592516614,0.201504196455281,0,0,0,0.286804595389004,0.365921118388786,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0,0.277765335475589,0,0,0,0.115930404975077,0.117408694235822,0.433099343283221,0,0,0,0.858486162094873,0.246217006087397,0,0,0,0,0,0,0,0,0.985326475791887,0.176096868026452,0.207328115540772,0,0.25248486685276,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,1.14861935834114,0,0,0,0,0,1.37921532141349,0.215627574859517,0.898401253958239,0.254094624222463,2.60279707715243,0.773288812777695,0,0,0,0,0.414415513436035,0.24538298343828,0,0.271265023699736,0.207970861530807,0.356857977594324,0.473107245101804,0.234282829985426,0.300946099727719,0,0,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0.82707210449155,1.72571360654893,1.49418580924822,0.303127571446259,0,0,0.744323423456331,0,0,0.128139149255701,0,0.321707842287215,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0.114814448164607,0,0,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0.206082023295445,0.457847324091717,0,0,0,0,0.096670718292122,0,0.307007349452259,0.413509717453592,0.214840489736547,0.145016693914229,0.255679882248303,0.178064071293475,0,0,0.255225424989168,0.2023155617111,0,0.62962469366128,0,0,0,0,0,0.286249773483982,0.744316738719335,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0,0,0,0,0.329294892959902,0.75894634753143,0.699869440489966,0,0,0,0.470719003883896,0,0,0,0.229723400206959,2.53723804616085,3.82318603571188,2.27858874869665,2.1440859791201,1.64544909234478,2.59389324477087,4.32025149790492,2.37937552888281,0,0.962479855263359,0,0.185803175125719,0.144269212976445,0.0711418433484141,1.59426272728822,0,0.383010740264733,0,0.324621940274555,0.842391534340376,0.456469358066384,0.156679895773023,2.50634477090067,0,0.481764225311099,0.403599414382095,0,0.343505344755765,0,0,0,0.390776190804081,0.278406173895242,0,0,0.33307196799782,0,0.18714054040822,0.586032717087576,0,0.445773537109913,1.13654458722565,0.47748896947538,0,0.614321404198464,0,0,0.779160935160341,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0,0.874813840149763,0.173624994933292,0,0.60298219312704,1.52581736317083,0.221158519862449,0,0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| ||
|short_description=p3@HELB | |short_description=p3@HELB | ||
}} | }} |
Latest revision as of 00:35, 20 September 2015
Short description: | p3@HELB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HELB_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -71bp_to_ENST00000247815_5end |
EntrezGene: | HELB |
HGNC: | 17196 |
UniProt: | Q8NG08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.50e-25 | 18 |
alpha-beta T cell | 3.50e-25 | 18 |
immature T cell | 3.50e-25 | 18 |
mature T cell | 3.50e-25 | 18 |
immature alpha-beta T cell | 3.50e-25 | 18 |
T cell | 8.69e-24 | 25 |
pro-T cell | 8.69e-24 | 25 |
CD8-positive, alpha-beta T cell | 3.04e-19 | 11 |
lymphoid lineage restricted progenitor cell | 1.15e-14 | 52 |
lymphocyte | 2.61e-14 | 53 |
common lymphoid progenitor | 2.61e-14 | 53 |
CD4-positive, alpha-beta T cell | 2.84e-09 | 6 |
regulatory T cell | 6.07e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.07e-08 | 2 |
naive regulatory T cell | 6.07e-08 | 2 |
nongranular leukocyte | 1.71e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
blood | 3.27e-21 | 15 |
haemolymphatic fluid | 3.27e-21 | 15 |
organism substance | 3.27e-21 | 15 |