FFCP PHASE1:Hg19::chr14:23292476..23292500,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9056 | |EntrezGene=9056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11065 | |HGNC=11065 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=144bp_to_ENST00000553874_5end | |association_with_transcript=144bp_to_ENST00000553874_5end | ||
|cluster_id=chr14:23292476..23292500,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_12_at_SLC7A7_5end | |description=CAGE_peak_12_at_SLC7A7_5end | ||
|id=chr14:23292476..23292500,- | |id=chr14:23292476..23292500,- | ||
|ontology_enrichment_celltype=CL:0002057!2.11e-18!42;CL:0000860!2.25e-16!45;CL:0002194!2.60e-08!63;CL:0000576!2.60e-08!63;CL:0000040!2.60e-08!63;CL:0000559!2.60e-08!63;CL:0002009!9.07e-08!65;CL:0000839!4.93e-07!70;CL:0000557!8.29e-07!71 | |ontology_enrichment_celltype=CL:0002057!2.11e-18!42;CL:0000860!2.25e-16!45;CL:0002194!2.60e-08!63;CL:0000576!2.60e-08!63;CL:0000040!2.60e-08!63;CL:0000559!2.60e-08!63;CL:0002009!9.07e-08!65;CL:0000839!4.93e-07!70;CL:0000557!8.29e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.92e-55;33!CL:0002057;9.92e-55;33!CL:0000473;6.86e-38;39!CL:0000234;6.86e-38;39!CL:0000576;4.35e-32;48!CL:0000766;2.86e-22;69!CL:0002087;2.99e-13;104!CL:0002393;3.67e-09;6!CL:0002397;3.67e-09;6!CL:0000763;1.53e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.08e-67,42;CL:0002057,7.08e-67,42;CL:0000473,6.62e-58,48;CL:0000234,6.62e-58,48;CL:0002194,2.42e-45,59;CL:0000576,2.42e-45,59;CL:0000040,2.42e-45,59;CL:0000559,2.42e-45,59;CL:0002009,1.01e-43,61;CL:0000839,4.33e-40,66;CL:0000557,1.99e-39,67;CL:0000766,2.18e-36,72;CL:0002087,2.16e-25,115;CL:0002031,4.01e-24,120;CL:0000763,9.87e-23,108;CL:0000049,9.87e-23,108;CL:0000738,1.10e-20,136;CL:0002032,1.13e-16,161;CL:0000837,1.13e-16,161;CL:0000037,9.16e-16,168;CL:0000988,1.06e-14,177;CL:0002393,3.13e-10,9;CL:0002397,3.13e-10,9;CL:0000034,2.10e-08,441;CL:0000134,2.18e-08,354;CL:0002320,4.16e-08,361;CL:0000048,4.41e-08,427;CL:0000723,7.03e-08,433;CL:0000219,4.03e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.65e-49;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.16e-09!216 | |ontology_enrichment_uberon=UBERON:0003081!1.16e-09!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.06e-34,76;UBERON:0001474,2.08e-31,82;UBERON:0002405,8.44e-30,93;UBERON:0004765,3.28e-28,90;UBERON:0002390,1.57e-25,98;UBERON:0003061,1.57e-25,98;UBERON:0002193,5.42e-25,108;UBERON:0001434,6.32e-25,100;UBERON:0003081,1.89e-17,203;UBERON:0002204,2.50e-17,167;UBERON:0000926,4.10e-10,315;UBERON:0004120,4.10e-10,315;UBERON:0006603,4.10e-10,315;UBERON:0002384,1.00e-07,371 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,0,0.893922188854576,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0,0,0.672325146451775,0.602694528023977,0,0.975865597581014,0,0,0.313454721478088,0,0,0,0.534893840235659,0.328402357799783,0.550975469195755,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,4.43196326825502,6.21687787157439,3.25516306073778,0,0,0,0,0,0.242584061187816,1.62700325833979,2.46700732813095,3.71647645074124,0.863077176966451,1.5369642391746,1.18241114944293,8.27389633767885,6.45484683583826,9.47985406160392,0.376484679085209,0.272906150057846,1.12361742222542,11.9372718024652,5.45579346029359,12.1474053901818,0,0,0,27.2796684310869,20.9932533135722,33.632401445761,0,0.521482918420201,1.08594422352558,15.1349875658342,16.2042159834528,27.8486900947978,0,0,0.209658645508376,0,0,0,0,0.39783335439818,1.27864907635244,0,0.546138611262131,0,0,0,0,0,0,1.70763890732835,2.34894875748376,0.764546456250458,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0.795285947051099,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0,0,0,4.2699598291882,0.74000264525148,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.206651562351531,0,0,1.82032272387605,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0.276149695926898,0,0,0.201504196455281,0,0.773043412653187,0,0.286804595389004,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0.664225598535437,0,0.0868836144680828,0,0.343143423810856,0.413536052245775,0,0.106727557803444,0.606255142892519,0,0.30239029332968,0,0.306923946576125,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0.362578348774867,0,0,0,0.182091168006717,0,0.451199612907412,0.15403067420883,0,0,0.211103257785751,0,0.340187410553031,0,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.286249773483982,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0.404364963146632,0,0,0,0.487426979262569,1.05650146756755,0,0.141405431953713,0,0,1.32687795048244,0,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0,0.0982490410131212,1.07001315444375,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0.284136146806413,0.47748896947538,0.593929361665277,0,0,0,0.222617410045812,0,0,0,0,0,0,0.246169610922139,0.311039587661807,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0.359030577639089,0.651884231532048,0.31900115973192,0.549585560411174,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0.141353071433941,0,0,0.176915129006678,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0.126373159256976,1.80388103297391,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.586654148204409,0,0.426905989478705,0,0.144090417154106,0.572682980829578,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,1.16495949527454,0,0,0,0,0,0,0,0.643012593860077,0.275078873194468,0.83088067605837,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.470531639396343,0,0,0,0.233713309847224,0,0,0,0,0.915360273587694,0,0.466311601748341,1.18284119991707,0.318593534327405,2.69881867298163,0.776314784381297,0,0,0,0.300515217994437,0,0.406870733204662,0.181848659202559,0.751873899297419,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0.194860308839388,0.398594520940089,0.327130788511688,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.40341013740704,0.781514011233092,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681707238073262,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |phase1_expression=0,0.428201047781966,0.422863212287913,0,0.893922188854576,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0,0,0.672325146451775,0.602694528023977,0,0.975865597581014,0,0,0.313454721478088,0,0,0,0.534893840235659,0.328402357799783,0.550975469195755,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,4.43196326825502,6.21687787157439,3.25516306073778,0,0,0,0,0,0.242584061187816,1.62700325833979,2.46700732813095,3.71647645074124,0.863077176966451,1.5369642391746,1.18241114944293,8.27389633767885,6.45484683583826,9.47985406160392,0.376484679085209,0.272906150057846,1.12361742222542,11.9372718024652,5.45579346029359,12.1474053901818,0,0,0,27.2796684310869,20.9932533135722,33.632401445761,0,0.521482918420201,1.08594422352558,15.1349875658342,16.2042159834528,27.8486900947978,0,0,0.209658645508376,0,0,0,0,0.39783335439818,1.27864907635244,0,0.546138611262131,0,0,0,0,0,0,1.70763890732835,2.34894875748376,0.764546456250458,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0.795285947051099,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0,0,0,4.2699598291882,0.74000264525148,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.206651562351531,0,0,1.82032272387605,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0.276149695926898,0,0,0.201504196455281,0,0.773043412653187,0,0.286804595389004,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0.664225598535437,0,0.0868836144680828,0,0.343143423810856,0.413536052245775,0,0.106727557803444,0.606255142892519,0,0.30239029332968,0,0.306923946576125,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0.362578348774867,0,0,0,0.182091168006717,0,0.451199612907412,0.15403067420883,0,0,0.211103257785751,0,0.340187410553031,0,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.286249773483982,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0.404364963146632,0,0,0,0.487426979262569,1.05650146756755,0,0.141405431953713,0,0,1.32687795048244,0,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0,0.0982490410131212,1.07001315444375,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0.284136146806413,0.47748896947538,0.593929361665277,0,0,0,0.222617410045812,0,0,0,0,0,0,0.246169610922139,0.311039587661807,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0.359030577639089,0.651884231532048,0.31900115973192,0.549585560411174,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0.141353071433941,0,0,0.176915129006678,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0.126373159256976,1.80388103297391,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.586654148204409,0,0.426905989478705,0,0.144090417154106,0.572682980829578,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,1.16495949527454,0,0,0,0,0,0,0,0.643012593860077,0.275078873194468,0.83088067605837,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.470531639396343,0,0,0,0.233713309847224,0,0,0,0,0.915360273587694,0,0.466311601748341,1.18284119991707,0.318593534327405,2.69881867298163,0.776314784381297,0,0,0,0.300515217994437,0,0.406870733204662,0.181848659202559,0.751873899297419,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0.194860308839388,0.398594520940089,0.327130788511688,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.40341013740704,0.781514011233092,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681707238073262,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | ||
|short_description=p12@SLC7A7 | |short_description=p12@SLC7A7 | ||
}} | }} |
Latest revision as of 07:27, 19 September 2015
Short description: | p12@SLC7A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SLC7A7_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 144bp_to_ENST00000553874_5end |
EntrezGene: | SLC7A7 |
HGNC: | 11065 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.08e-67 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.08e-67 | 42 |
defensive cell | 6.62e-58 | 48 |
phagocyte | 6.62e-58 | 48 |
monopoietic cell | 2.42e-45 | 59 |
monocyte | 2.42e-45 | 59 |
monoblast | 2.42e-45 | 59 |
promonocyte | 2.42e-45 | 59 |
macrophage dendritic cell progenitor | 1.01e-43 | 61 |
myeloid lineage restricted progenitor cell | 4.33e-40 | 66 |
granulocyte monocyte progenitor cell | 1.99e-39 | 67 |
myeloid leukocyte | 2.18e-36 | 72 |
nongranular leukocyte | 2.16e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 4.01e-24 | 120 |
myeloid cell | 9.87e-23 | 108 |
common myeloid progenitor | 9.87e-23 | 108 |
leukocyte | 1.10e-20 | 136 |
hematopoietic oligopotent progenitor cell | 1.13e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.13e-16 | 161 |
hematopoietic stem cell | 9.16e-16 | 168 |
hematopoietic cell | 1.06e-14 | 177 |
intermediate monocyte | 3.13e-10 | 9 |
CD14-positive, CD16-positive monocyte | 3.13e-10 | 9 |
stem cell | 2.10e-08 | 441 |
mesenchymal cell | 2.18e-08 | 354 |
connective tissue cell | 4.16e-08 | 361 |
multi fate stem cell | 4.41e-08 | 427 |
somatic stem cell | 7.03e-08 | 433 |
motile cell | 4.03e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.06e-34 | 76 |
bone element | 2.08e-31 | 82 |
immune system | 8.44e-30 | 93 |
skeletal element | 3.28e-28 | 90 |
hematopoietic system | 1.57e-25 | 98 |
blood island | 1.57e-25 | 98 |
hemolymphoid system | 5.42e-25 | 108 |
skeletal system | 6.32e-25 | 100 |
lateral plate mesoderm | 1.89e-17 | 203 |
musculoskeletal system | 2.50e-17 | 167 |
mesoderm | 4.10e-10 | 315 |
mesoderm-derived structure | 4.10e-10 | 315 |
presumptive mesoderm | 4.10e-10 | 315 |
connective tissue | 1.00e-07 | 371 |