FFCP PHASE1:Hg19::chr17:7112272..7112279,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:7112272..7112279,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_at_chr17:7112272..7112279,- | |description=CAGE_peak_at_chr17:7112272..7112279,- | ||
|id=chr17:7112272..7112279,- | |id=chr17:7112272..7112279,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.71e-14;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;3.26e-11;4!DOID:1325;5.86e-07;7!DOID:3904;5.86e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.10e-11,4;DOID:1325,5.70e-07,7;DOID:3904,5.70e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001905!7.33e-41!2;UBERON:0002757!7.33e-41!2;UBERON:0010134!7.33e-41!2;UBERON:0002784!7.33e-41!2;UBERON:0005408!7.33e-41!2;UBERON:0001899!7.33e-41!2;UBERON:0002771!4.65e-27!3;UBERON:0003296!5.17e-21!4;UBERON:0010133!5.17e-21!4;UBERON:0000966!6.94e-17!5;UBERON:0005388!6.94e-17!5;UBERON:0001802!6.94e-17!5;UBERON:0000970!3.02e-16!20;UBERON:0002104!1.71e-15!21;UBERON:0003056!2.03e-15!61;UBERON:0000020!3.49e-14!23;UBERON:0000200!4.53e-14!6;UBERON:0001032!1.31e-13!24;UBERON:0004456!1.31e-13!24;UBERON:0001894!1.89e-12!7;UBERON:0006222!1.89e-12!7;UBERON:0003075!6.32e-11!86;UBERON:0007284!6.32e-11!86;UBERON:0001871!8.47e-11!7;UBERON:0002346!1.96e-10!90;UBERON:0000019!5.18e-10!19;UBERON:0000047!5.18e-10!19;UBERON:0004088!5.18e-10!19;UBERON:0003072!5.18e-10!19;UBERON:0003071!5.18e-10!19;UBERON:0004128!5.18e-10!19;UBERON:0001456!4.08e-09!21;UBERON:0005743!4.82e-08!86;UBERON:0002780!6.36e-08!41;UBERON:0001890!6.36e-08!41;UBERON:0006240!6.36e-08!41;UBERON:0003080!9.57e-08!42;UBERON:0000033!1.64e-07!123;UBERON:0000073!2.79e-07!94;UBERON:0001016!2.79e-07!94;UBERON:0000153!3.76e-07!129;UBERON:0007811!3.76e-07!129;UBERON:0000955!4.26e-07!69;UBERON:0006238!4.26e-07!69;UBERON:0005085!9.31e-07!29 | |ontology_enrichment_uberon=UBERON:0001905!7.33e-41!2;UBERON:0002757!7.33e-41!2;UBERON:0010134!7.33e-41!2;UBERON:0002784!7.33e-41!2;UBERON:0005408!7.33e-41!2;UBERON:0001899!7.33e-41!2;UBERON:0002771!4.65e-27!3;UBERON:0003296!5.17e-21!4;UBERON:0010133!5.17e-21!4;UBERON:0000966!6.94e-17!5;UBERON:0005388!6.94e-17!5;UBERON:0001802!6.94e-17!5;UBERON:0000970!3.02e-16!20;UBERON:0002104!1.71e-15!21;UBERON:0003056!2.03e-15!61;UBERON:0000020!3.49e-14!23;UBERON:0000200!4.53e-14!6;UBERON:0001032!1.31e-13!24;UBERON:0004456!1.31e-13!24;UBERON:0001894!1.89e-12!7;UBERON:0006222!1.89e-12!7;UBERON:0003075!6.32e-11!86;UBERON:0007284!6.32e-11!86;UBERON:0001871!8.47e-11!7;UBERON:0002346!1.96e-10!90;UBERON:0000019!5.18e-10!19;UBERON:0000047!5.18e-10!19;UBERON:0004088!5.18e-10!19;UBERON:0003072!5.18e-10!19;UBERON:0003071!5.18e-10!19;UBERON:0004128!5.18e-10!19;UBERON:0001456!4.08e-09!21;UBERON:0005743!4.82e-08!86;UBERON:0002780!6.36e-08!41;UBERON:0001890!6.36e-08!41;UBERON:0006240!6.36e-08!41;UBERON:0003080!9.57e-08!42;UBERON:0000033!1.64e-07!123;UBERON:0000073!2.79e-07!94;UBERON:0001016!2.79e-07!94;UBERON:0000153!3.76e-07!129;UBERON:0007811!3.76e-07!129;UBERON:0000955!4.26e-07!69;UBERON:0006238!4.26e-07!69;UBERON:0005085!9.31e-07!29 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.49e-79;2!UBERON:0002757;3.49e-79;2!UBERON:0010134;3.49e-79;2!UBERON:0005408;3.49e-79;2!UBERON:0001899;3.49e-79;2!UBERON:0003296;2.71e-40;4!UBERON:0010133;2.71e-40;4!UBERON:0002784;2.71e-40;4!UBERON:0001894;1.44e-23;7!UBERON:0000966;3.10e-09;5!UBERON:0005388;3.10e-09;5!UBERON:0001802;3.10e-09;5!UBERON:0000970;5.82e-09;20!UBERON:0002104;1.39e-08;21!UBERON:0000020;6.40e-08;23!UBERON:0001032;1.25e-07;24!UBERON:0004456;1.25e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.49e-79,2;UBERON:0002757,3.49e-79,2;UBERON:0010134,3.49e-79,2;UBERON:0005408,3.49e-79,2;UBERON:0001899,3.49e-79,2;UBERON:0003296,2.71e-40,4;UBERON:0010133,2.71e-40,4;UBERON:0002784,2.71e-40,4;UBERON:0001894,1.44e-23,7;UBERON:0006222,1.44e-23,7;UBERON:0000970,1.42e-08,21;UBERON:0002104,1.42e-08,21;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6;UBERON:0000020,1.27e-07,24;UBERON:0001032,1.27e-07,24;UBERON:0004456,1.27e-07,24 | |||
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|short_description=p@chr17:7112272..7112279,- | |short_description=p@chr17:7112272..7112279,- | ||
}} | }} |
Latest revision as of 20:37, 25 July 2015
Short description: | p@chr17:7112272..7112279, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7112272..7112279, - |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 3.49e-79 | 2 |
regional part of epithalamus | 3.49e-79 | 2 |
secretory circumventricular organ | 3.49e-79 | 2 |
circumventricular organ | 3.49e-79 | 2 |
epithalamus | 3.49e-79 | 2 |
gland of diencephalon | 2.71e-40 | 4 |
neuroendocrine gland | 2.71e-40 | 4 |
regional part of diencephalon | 2.71e-40 | 4 |
diencephalon | 1.44e-23 | 7 |
future diencephalon | 1.44e-23 | 7 |
eye | 1.42e-08 | 21 |
visual system | 1.42e-08 | 21 |
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |
sense organ | 1.27e-07 | 24 |
sensory system | 1.27e-07 | 24 |
entire sense organ system | 1.27e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.10e-11 | 4 |
bronchus cancer | 5.70e-07 | 7 |
bronchogenic carcinoma | 5.70e-07 | 7 |