FFCP PHASE1:Hg19::chr18:28682263..28682280,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1824 | |EntrezGene=1824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3036 | |HGNC=3036 | ||
|TSSclassifier=strong | |||
|UniProt=Q02487 | |UniProt=Q02487 | ||
|association_with_transcript=97bp_to_ENST00000280904_5end | |association_with_transcript=97bp_to_ENST00000280904_5end | ||
|cluster_id=chr18:28682263..28682280,- | |||
|coexpression_cluster_id=C629 | |coexpression_cluster_id=C629 | ||
|description=CAGE_peak_4_at_DSC2_5end | |description=CAGE_peak_4_at_DSC2_5end | ||
|id=chr18:28682263..28682280,- | |id=chr18:28682263..28682280,- | ||
|ontology_enrichment_celltype=CL:0000066!1.55e-23!254;CL:0002076!5.43e-21!43;CL:0000223!1.51e-19!59;CL:0002251!1.47e-11!21;CL:0002368!1.73e-09!13;CL:0002159!2.13e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.55e-23!254;CL:0002076!5.43e-21!43;CL:0000223!1.51e-19!59;CL:0002251!1.47e-11!21;CL:0002368!1.73e-09!13;CL:0002159!2.13e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.34e-18;42!CL:0002368;2.02e-13;13!CL:0002251;1.37e-11;20!CL:0002159;7.65e-10;14!CL:0002202;1.21e-08;9!CL:0002632;1.21e-08;9!CL:0000622;1.97e-08;5!CL:0000349;1.56e-07;19!CL:0000150;1.87e-07;9!CL:0000154;6.70e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.73e-23,42;CL:0000223,2.52e-20,58;CL:0000066,6.39e-20,253;CL:0002368,2.02e-13,13;CL:0002251,1.38e-11,20;CL:0002159,7.83e-10,14;CL:0002202,1.27e-08,9;CL:0002632,1.27e-08,9;CL:0000622,1.97e-08,5;CL:0000349,1.56e-07,19;CL:0000150,1.78e-07,9;CL:0000154,6.71e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;1.79e-10;58 | |||
|ontology_enrichment_disease=DOID:305!1.38e-12!106;DOID:1749!2.76e-08!14;DOID:0050687!3.33e-07!143 | |ontology_enrichment_disease=DOID:305!1.38e-12!106;DOID:1749!2.76e-08!14;DOID:0050687!3.33e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.11e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.96e-28!169;UBERON:0000925!2.96e-28!169;UBERON:0006595!2.96e-28!169;UBERON:0001007!5.91e-21!155;UBERON:0001555!5.91e-21!155;UBERON:0007026!5.91e-21!155;UBERON:0004921!4.11e-19!129;UBERON:0004185!4.11e-19!129;UBERON:0000077!4.71e-18!130;UBERON:0001004!3.22e-14!72;UBERON:0001041!1.22e-12!98;UBERON:0005911!1.17e-11!82;UBERON:0000464!7.24e-11!104;UBERON:0000466!7.62e-11!126;UBERON:0000161!1.55e-10!35;UBERON:0000166!5.21e-10!21;UBERON:0005153!9.06e-10!37;UBERON:0005631!2.04e-09!14;UBERON:0000158!2.04e-09!14;UBERON:0005157!5.25e-09!51;UBERON:0000065!6.59e-09!53;UBERON:0005178!7.04e-09!34;UBERON:0002224!7.04e-09!34;UBERON:0000062!1.66e-08!511;UBERON:0005181!2.03e-08!35;UBERON:0005409!3.84e-08!35;UBERON:0000165!6.98e-08!28;UBERON:0000930!6.98e-08!28;UBERON:0003124!3.27e-07!7;UBERON:0001044!5.59e-07!6;UBERON:0003293!5.59e-07!6;UBERON:0003294!5.59e-07!6;UBERON:0010047!5.59e-07!6;UBERON:0000167!5.59e-07!6;UBERON:0002048!7.22e-07!22;UBERON:0000117!7.22e-07!22;UBERON:0000171!7.22e-07!22;UBERON:0000170!7.22e-07!22;UBERON:0005597!7.22e-07!22;UBERON:0000118!7.22e-07!22;UBERON:0004807!7.48e-07!28 | |ontology_enrichment_uberon=UBERON:0004119!2.96e-28!169;UBERON:0000925!2.96e-28!169;UBERON:0006595!2.96e-28!169;UBERON:0001007!5.91e-21!155;UBERON:0001555!5.91e-21!155;UBERON:0007026!5.91e-21!155;UBERON:0004921!4.11e-19!129;UBERON:0004185!4.11e-19!129;UBERON:0000077!4.71e-18!130;UBERON:0001004!3.22e-14!72;UBERON:0001041!1.22e-12!98;UBERON:0005911!1.17e-11!82;UBERON:0000464!7.24e-11!104;UBERON:0000466!7.62e-11!126;UBERON:0000161!1.55e-10!35;UBERON:0000166!5.21e-10!21;UBERON:0005153!9.06e-10!37;UBERON:0005631!2.04e-09!14;UBERON:0000158!2.04e-09!14;UBERON:0005157!5.25e-09!51;UBERON:0000065!6.59e-09!53;UBERON:0005178!7.04e-09!34;UBERON:0002224!7.04e-09!34;UBERON:0000062!1.66e-08!511;UBERON:0005181!2.03e-08!35;UBERON:0005409!3.84e-08!35;UBERON:0000165!6.98e-08!28;UBERON:0000930!6.98e-08!28;UBERON:0003124!3.27e-07!7;UBERON:0001044!5.59e-07!6;UBERON:0003293!5.59e-07!6;UBERON:0003294!5.59e-07!6;UBERON:0010047!5.59e-07!6;UBERON:0000167!5.59e-07!6;UBERON:0002048!7.22e-07!22;UBERON:0000117!7.22e-07!22;UBERON:0000171!7.22e-07!22;UBERON:0000170!7.22e-07!22;UBERON:0005597!7.22e-07!22;UBERON:0000118!7.22e-07!22;UBERON:0004807!7.48e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.06e-19;33!UBERON:0001041;5.36e-14;14!UBERON:0001555;5.77e-12;54!UBERON:0005409;1.28e-11;22!UBERON:0000161;1.43e-09;19!UBERON:0000166;1.43e-09;19!UBERON:0001044;1.68e-09;6!UBERON:0003293;1.68e-09;6!UBERON:0003294;1.68e-09;6!UBERON:0010047;1.68e-09;6!UBERON:0003408;1.68e-09;6!UBERON:0000167;1.68e-09;6!UBERON:0000165;3.29e-09;28!UBERON:0005631;4.40e-09;10!UBERON:0000158;4.40e-09;10!UBERON:0000160;1.85e-08;17!UBERON:0004807;2.10e-08;22!UBERON:0005178;3.27e-08;34!UBERON:0002224;3.27e-08;34!UBERON:0005911;8.22e-08;36!UBERON:0000478;1.12e-07;24!UBERON:0007196;2.04e-07;15!UBERON:0001558;2.04e-07;15!UBERON:0005181;2.39e-07;35!UBERON:0001007;4.63e-07;81!UBERON:0000365;5.10e-07;5!UBERON:0001004;5.27e-07;65!UBERON:0000486;6.35e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.07e-27,160;UBERON:0000925,7.07e-27,160;UBERON:0006595,7.07e-27,160;UBERON:0004921,4.72e-19,118;UBERON:0001007,1.12e-18,145;UBERON:0001555,1.12e-18,145;UBERON:0007026,1.12e-18,145;UBERON:0001004,2.03e-16,74;UBERON:0005631,1.46e-13,14;UBERON:0000158,1.46e-13,14;UBERON:0001041,5.60e-12,87;UBERON:0000166,3.21e-11,22;UBERON:0000161,1.39e-10,36;UBERON:0003124,7.83e-10,7;UBERON:0005409,9.81e-10,25;UBERON:0000065,1.22e-09,54;UBERON:0001044,1.71e-09,6;UBERON:0003293,1.71e-09,6;UBERON:0003294,1.71e-09,6;UBERON:0010047,1.71e-09,6;UBERON:0000167,1.71e-09,6;UBERON:0005178,6.54e-09,34;UBERON:0002224,6.54e-09,34;UBERON:0000165,9.33e-09,29;UBERON:0000930,9.33e-09,29;UBERON:0003408,1.38e-08,10;UBERON:0000153,1.44e-08,62;UBERON:0007811,1.44e-08,62;UBERON:0005181,1.61e-08,35;UBERON:0000160,1.97e-08,17;UBERON:0005153,2.34e-08,37;UBERON:0004807,6.08e-08,28;UBERON:0000478,1.16e-07,24;UBERON:0005911,1.85e-07,82;UBERON:0005157,1.90e-07,47;UBERON:0007196,2.13e-07,15;UBERON:0001558,2.13e-07,15;UBERON:0000365,4.84e-07,5;UBERON:0003102,5.08e-07,99;UBERON:0000072,6.64e-07,47;UBERON:0005795,6.67e-07,22;UBERON:0000033,8.91e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.45733936501509,0,9.61142037372758,4.74780560811216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,7.35536979583142,5.72291245678675,4.80680213216824,0,0,0,0,0,0,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0.659702600373432,0,0,0,0,0,0,0.521482918420201,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.527008714158756,0.851363990735132,19.3076502795047,40.7862887062872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.7822074414073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.6769528149051,33.002280591491,26.6728273711774,0.121973706129595,0.265059536642971,0.348581828608555,1.24393266018445,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.737930631258681,0,46.8633718694831,5.62008766288098,8.04231779293047,6.85154494173119,0,0,0,0,0.587043471179108,0,0,0,0,0.858486162094873,0,0,0,19.6841051372232,31.7486222295845,22.4004653642971,3.85101647622248,3.48760726216754,3.83382679165211,0,0,0.414656231081544,1.15295962733569,0.50496973370552,0.253991577168676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,8.97484377612075,6.21623270154053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.39695471483404,6.65741758041988,6.04780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,17.6445693866891,39.3185822756277,0,0,0,0.451199612907412,1.00119938235739,0,0,1.68882606228601,0,0,0,0,0,0,1.01950509218015,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0,2.47298427954533,0,0,30.4360735137971,22.1020483652417,0,0,0,0,0,0,0,0,0,16.5284915360978,5.76570202095319,10.3366297120613,27.5149163927096,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0,0,0,0,0,0,0,6.63932577806033,3.35151137767894,3.26672954583968,2.44773882019626,3.44404298136984,8.42357378338128,21.7280775232971,6.66197860600182,1.52234282769651,0.764637207142375,0,0.476463550915578,0,0,0,0.79312517629427,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,3.7428108081644,0,0,0,0,163.539972045318,21.0844923391173,123.478602243891,0,0,0,0,0,0,18.787306256118,1.25966373927138,0,0,0,0.898683511473268,0.716084698702437,0,0.0986434056369336,0,0,0,0,0,1.04171104434093,1.22443999994674,1.44999915086959,2.73104275885199,11.4414142631745,13.9468732243082,0,0,0,0,0,0,0,0,0,0,42.1059707721382,58.1743954288706,0,26.975976813403,1.52587995496613,21.6208270124796,27.753100896677,6.41183153813036,7.99552164027952,0,0.156980256395025,0.498635045700469,0.451191321234361,0,0.167821586975843,0,0,0,0.163232808159148,2.26164914294305,0,33.8389056566692,70.5891364736647,54.9927130440263,0,0,0,0.202203398942031,0,0,0,1.17398771359254,0,0,9.67925728389311,0,0.063186579628488,0.300646838828985,1.14057010536972,0,0,0,0,0.569219092059585,0,6.24815058006471,10.387194125924,1.39294730528644,1.04836000945218,0,0,0,0,238.980936627465,0,4.74559555639118,0,0,0,0.391102765469606,1.36269994427607,0.640358984218058,0.599428828746391,4.17862209746907,5.03961023130029,0.171594997861965,0,0,15.3201122500917,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,8.9855550224546,0,0.446342914883745,0.604651252380536,0,3.49487848582361,0.709048640765013,1.07140615895516,1.41547442093788,0,0,0,0.136203406111576,0.803765742325096,0.550157746388935,0,0.449947783103001,0,0,30.1891218839339,1.26089131678717,1.25891011523995,0.528001682597033,0,0.959575986597226,0,0.662091970365432,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,2.81926008926669,0.854299300541557,1.10043013569766,0.828478110694391,0,0,0,8.29843635101236,0,0,0,0,2.35581144375351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,1.28664954824955,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0,0.163565394255844,0,0,1.90180911022764,0,0,0,0,0,38.7466236382861,19.9064723210551,0,0,0,0,0,0,0,0,0,0,4.00285374142735,0,0,0,0,0,0,0,0,0,0,6.18330626556461,0.825788063434183,2.93485757634686,0.924205329202706,0,0,0,0.526472298444801,0,1.56302802246618,23.0477891143652,0,9.4627895178909,0,0,0,0.0634158101939068,0,24.6715995085732,2.48105589194647,0,2.55524855279191,0,0,0.606965604236632,0,11.8861176017936,0,0,0,0,0.590969204419841,2.33585943973345,3.06123062117005,0.157115589916002,27.4666720047513,3.65263488203798,0,0,0.142953088353313,0,0,0,0,7.45978190986933,25.9492085182804,111.292805552069,10.3254566116867,0,0,0,6.18588545068935,0,0,0,12.8576806035968,1.21917924982269,0,0.102662806856247,0,10.1999308542419,0.233939463462106,1.98950775161368,0.118920090777569,33.996770693727,0,0,103.336197706538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| ||
|short_description=p4@DSC2 | |short_description=p4@DSC2 | ||
}} | }} |
Latest revision as of 04:41, 19 September 2015
Short description: | p4@DSC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DSC2_5end |
Coexpression cluster: | C629_esophagus_amniotic_tongue_throat_tonsil_uterus_salivary |
Association with transcript: | 97bp_to_ENST00000280904_5end |
EntrezGene: | DSC2 |
HGNC: | 3036 |
UniProt: | Q02487 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.73e-23 | 42 |
endodermal cell | 2.52e-20 | 58 |
epithelial cell | 6.39e-20 | 253 |
respiratory epithelial cell | 2.02e-13 | 13 |
epithelial cell of alimentary canal | 1.38e-11 | 20 |
general ecto-epithelial cell | 7.83e-10 | 14 |
epithelial cell of tracheobronchial tree | 1.27e-08 | 9 |
epithelial cell of lower respiratory tract | 1.27e-08 | 9 |
acinar cell | 1.97e-08 | 5 |
extraembryonic cell | 1.56e-07 | 19 |
glandular epithelial cell | 1.78e-07 | 9 |
protein secreting cell | 6.71e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.11e-08 | 106 |