FFCP PHASE1:Hg19::chr1:44440575..44440646,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=533 | |EntrezGene=533 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=861 | |HGNC=861 | ||
|TSSclassifier=strong | |||
|UniProt=Q99437,E9PKB6,E9PNU0,E9PNL3,D3DPY5,Q6IB32 | |UniProt=Q99437,E9PKB6,E9PNU0,E9PNL3,D3DPY5,Q6IB32 | ||
|association_with_transcript=0bp_to_ENST00000236067,ENST00000461670,ENST00000468183,ENST00000471859,ENST00000472277,ENST00000473485,ENST00000532642,NM_001039457,NM_004047,uc001clc.2,uc001cld.2,uc001cle.2,uc001clf.2_5end | |association_with_transcript=0bp_to_ENST00000236067,ENST00000461670,ENST00000468183,ENST00000471859,ENST00000472277,ENST00000473485,ENST00000532642,NM_001039457,NM_004047,uc001clc.2,uc001cld.2,uc001cle.2,uc001clf.2_5end | ||
|cluster_id=chr1:44440575..44440646,+ | |||
|coexpression_cluster_id=C2383 | |coexpression_cluster_id=C2383 | ||
|description=CAGE_peak_1_at_ATP6V0B_5end | |description=CAGE_peak_1_at_ATP6V0B_5end | ||
|id=chr1:44440575..44440646,+ | |id=chr1:44440575..44440646,+ | ||
|ontology_enrichment_celltype=CL:0002009!3.05e-33!65;CL:0000766!3.63e-33!76;CL:0002194!3.33e-32!63;CL:0000576!3.33e-32!63;CL:0000040!3.33e-32!63;CL:0000559!3.33e-32!63;CL:0000763!7.56e-30!112;CL:0000049!7.56e-30!112;CL:0000557!1.30e-29!71;CL:0000839!5.36e-29!70;CL:0002057!8.21e-26!42;CL:0000860!1.47e-24!45;CL:0000037!3.62e-15!172;CL:0000566!3.62e-15!172;CL:0000988!4.83e-15!182;CL:0000738!9.27e-15!140;CL:0002032!5.37e-14!165;CL:0000837!5.37e-14!165;CL:0002371!1.53e-12!591;CL:0000144!1.88e-12!625;CL:0000723!2.27e-12!436;CL:0000034!3.48e-12!444;CL:0000048!5.68e-12!430;CL:0000012!2.69e-11!682;CL:0002087!2.94e-11!119;CL:0002031!4.31e-11!124;CL:0000548!1.56e-10!679;CL:0000004!1.56e-10!679;CL:0000255!1.56e-10!679;CL:0000134!6.04e-10!358;CL:0002320!6.07e-10!365;CL:0000003!1.09e-09!722;CL:0000063!1.12e-09!578;CL:0000219!1.43e-09!390 | |ontology_enrichment_celltype=CL:0002009!3.05e-33!65;CL:0000766!3.63e-33!76;CL:0002194!3.33e-32!63;CL:0000576!3.33e-32!63;CL:0000040!3.33e-32!63;CL:0000559!3.33e-32!63;CL:0000763!7.56e-30!112;CL:0000049!7.56e-30!112;CL:0000557!1.30e-29!71;CL:0000839!5.36e-29!70;CL:0002057!8.21e-26!42;CL:0000860!1.47e-24!45;CL:0000037!3.62e-15!172;CL:0000566!3.62e-15!172;CL:0000988!4.83e-15!182;CL:0000738!9.27e-15!140;CL:0002032!5.37e-14!165;CL:0000837!5.37e-14!165;CL:0002371!1.53e-12!591;CL:0000144!1.88e-12!625;CL:0000723!2.27e-12!436;CL:0000034!3.48e-12!444;CL:0000048!5.68e-12!430;CL:0000012!2.69e-11!682;CL:0002087!2.94e-11!119;CL:0002031!4.31e-11!124;CL:0000548!1.56e-10!679;CL:0000004!1.56e-10!679;CL:0000255!1.56e-10!679;CL:0000134!6.04e-10!358;CL:0002320!6.07e-10!365;CL:0000003!1.09e-09!722;CL:0000063!1.12e-09!578;CL:0000219!1.43e-09!390 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.34e-19;39!CL:0000234;2.34e-19;39!CL:0000860;4.35e-19;33!CL:0002057;4.35e-19;33!CL:0000576;3.40e-18;48!CL:0000766;1.63e-14;69!CL:0000763;3.52e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,6.28e-35,61;CL:0000766,1.47e-34,72;CL:0002194,6.80e-34,59;CL:0000576,6.80e-34,59;CL:0000040,6.80e-34,59;CL:0000559,6.80e-34,59;CL:0000557,6.03e-31,67;CL:0000763,1.33e-30,108;CL:0000049,1.33e-30,108;CL:0000839,2.54e-30,66;CL:0000473,7.05e-30,48;CL:0000234,7.05e-30,48;CL:0000860,8.21e-26,42;CL:0002057,8.21e-26,42;CL:0000037,2.45e-15,168;CL:0000988,4.12e-15,177;CL:0000738,5.44e-15,136;CL:0002032,3.68e-14,161;CL:0000837,3.68e-14,161;CL:0000723,7.29e-12,433;CL:0000034,1.11e-11,441;CL:0000048,1.78e-11,427;CL:0002087,1.83e-11,115;CL:0002031,2.78e-11,120;CL:0000134,8.13e-10,354;CL:0002320,8.20e-10,361;CL:0000219,1.96e-09,386 | |||
|ontology_enrichment_development_v019=CL:0002057;9.98e-19;42!CL:0000049;2.22e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.01e-29!80;UBERON:0002390!2.91e-26!102;UBERON:0003061!2.91e-26!102;UBERON:0001474!2.07e-25!86;UBERON:0002193!1.11e-22!112;UBERON:0003081!1.75e-22!216;UBERON:0004765!1.57e-19!101;UBERON:0001434!1.57e-19!101;UBERON:0002405!1.62e-17!115;UBERON:0002204!2.51e-15!167;UBERON:0002384!9.85e-09!375 | |ontology_enrichment_uberon=UBERON:0002371!3.01e-29!80;UBERON:0002390!2.91e-26!102;UBERON:0003061!2.91e-26!102;UBERON:0001474!2.07e-25!86;UBERON:0002193!1.11e-22!112;UBERON:0003081!1.75e-22!216;UBERON:0004765!1.57e-19!101;UBERON:0001434!1.57e-19!101;UBERON:0002405!1.62e-17!115;UBERON:0002204!2.51e-15!167;UBERON:0002384!9.85e-09!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.21e-30,76;UBERON:0002390,5.34e-27,98;UBERON:0003061,5.34e-27,98;UBERON:0001474,2.72e-26,82;UBERON:0004765,1.03e-23,90;UBERON:0002193,3.15e-23,108;UBERON:0003081,4.56e-22,203;UBERON:0002405,3.62e-21,93;UBERON:0001434,5.56e-19,100;UBERON:0002204,2.34e-14,167;UBERON:0000926,1.24e-11,315;UBERON:0004120,1.24e-11,315;UBERON:0006603,1.24e-11,315;UBERON:0002384,1.32e-08,371 | |||
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|short_description=p1@ATP6V0B | |short_description=p1@ATP6V0B | ||
}} | }} |
Latest revision as of 05:35, 18 September 2015
Short description: | p1@ATP6V0B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATP6V0B_5end |
Coexpression cluster: | C2383_Eosinophils_CD14_Monocytederived_Neutrophils_Alveolar_Mesenchymal_Melanocyte |
Association with transcript: | 0bp_to_ENST00000236067, ENST00000461670, ENST00000468183, ENST00000471859, ENST00000472277, ENST00000473485, ENST00000532642, NM_001039457, NM_004047, uc001clc.2, uc001cld.2, uc001cle.2, uc001clf.2_5end |
EntrezGene: | ATP6V0B |
HGNC: | 861 |
UniProt: | Q99437E9PKB6E9PNU0E9PNL3D3DPY5Q6IB32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 6.28e-35 | 61 |
myeloid leukocyte | 1.47e-34 | 72 |
monopoietic cell | 6.80e-34 | 59 |
monocyte | 6.80e-34 | 59 |
monoblast | 6.80e-34 | 59 |
promonocyte | 6.80e-34 | 59 |
granulocyte monocyte progenitor cell | 6.03e-31 | 67 |
myeloid cell | 1.33e-30 | 108 |
common myeloid progenitor | 1.33e-30 | 108 |
myeloid lineage restricted progenitor cell | 2.54e-30 | 66 |
defensive cell | 7.05e-30 | 48 |
phagocyte | 7.05e-30 | 48 |
classical monocyte | 8.21e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.21e-26 | 42 |
hematopoietic stem cell | 2.45e-15 | 168 |
hematopoietic cell | 4.12e-15 | 177 |
leukocyte | 5.44e-15 | 136 |
hematopoietic oligopotent progenitor cell | 3.68e-14 | 161 |
hematopoietic multipotent progenitor cell | 3.68e-14 | 161 |
somatic stem cell | 7.29e-12 | 433 |
stem cell | 1.11e-11 | 441 |
multi fate stem cell | 1.78e-11 | 427 |
nongranular leukocyte | 1.83e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 2.78e-11 | 120 |
mesenchymal cell | 8.13e-10 | 354 |
connective tissue cell | 8.20e-10 | 361 |
motile cell | 1.96e-09 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.21e-30 | 76 |
hematopoietic system | 5.34e-27 | 98 |
blood island | 5.34e-27 | 98 |
bone element | 2.72e-26 | 82 |
skeletal element | 1.03e-23 | 90 |
hemolymphoid system | 3.15e-23 | 108 |
lateral plate mesoderm | 4.56e-22 | 203 |
immune system | 3.62e-21 | 93 |
skeletal system | 5.56e-19 | 100 |
musculoskeletal system | 2.34e-14 | 167 |
mesoderm | 1.24e-11 | 315 |
mesoderm-derived structure | 1.24e-11 | 315 |
presumptive mesoderm | 1.24e-11 | 315 |
connective tissue | 1.32e-08 | 371 |