FFCP PHASE1:Hg19::chr2:116000264..116000269,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:116000264..116000269,+ | |||
|coexpression_cluster_id=C87 | |coexpression_cluster_id=C87 | ||
|description=CAGE_peak_at_chr2:116000264..116000269,+ | |description=CAGE_peak_at_chr2:116000264..116000269,+ | ||
|id=chr2:116000264..116000269,+ | |id=chr2:116000264..116000269,+ | ||
|ontology_enrichment_celltype=CL:0002553!6.23e-07!1 | |ontology_enrichment_celltype=CL:0002553!6.23e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000081;2.37e-10;11!CL:0000243;3.38e-07;15!CL:0000125;3.38e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000081,2.37e-10,11;CL:0000243,3.38e-07,15;CL:0000125,3.38e-07,15;CL:0000030,3.38e-07,15;CL:0000339,3.38e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.27e-34;3!UBERON:0006238;2.16e-10;10!CL:0000339;3.38e-07;15 | |||
|ontology_enrichment_disease=DOID:225!7.35e-07!1;DOID:9119!8.21e-07!1 | |ontology_enrichment_disease=DOID:225!7.35e-07!1;DOID:9119!8.21e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3093;1.22e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.22e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.08e-13!82;UBERON:0002791!4.99e-13!33;UBERON:0005743!6.62e-13!86;UBERON:0000955!9.45e-13!69;UBERON:0006238!9.45e-13!69;UBERON:0002020!1.19e-12!34;UBERON:0003528!1.19e-12!34;UBERON:0001893!1.32e-12!34;UBERON:0001049!6.18e-12!57;UBERON:0005068!6.18e-12!57;UBERON:0006241!6.18e-12!57;UBERON:0007135!6.18e-12!57;UBERON:0002616!1.89e-11!59;UBERON:0000073!2.26e-11!94;UBERON:0001016!2.26e-11!94;UBERON:0001950!4.90e-11!20;UBERON:0001869!6.07e-11!32;UBERON:0002780!3.30e-10!41;UBERON:0001890!3.30e-10!41;UBERON:0006240!3.30e-10!41;UBERON:0002619!5.33e-10!22;UBERON:0003075!6.22e-10!86;UBERON:0007284!6.22e-10!86;UBERON:0003080!6.26e-10!42;UBERON:0002346!2.32e-09!90;UBERON:0000956!9.63e-09!25;UBERON:0000203!9.63e-09!25;UBERON:0003056!7.60e-08!61;UBERON:0002771!1.15e-07!3;UBERON:0000988!1.51e-07!3;UBERON:0000033!6.28e-07!123;UBERON:0002134!6.96e-07!1;UBERON:0005208!6.96e-07!1;UBERON:0005946!6.96e-07!1;UBERON:0005965!6.96e-07!1;UBERON:0002078!6.96e-07!1 | |ontology_enrichment_uberon=UBERON:0001017!1.08e-13!82;UBERON:0002791!4.99e-13!33;UBERON:0005743!6.62e-13!86;UBERON:0000955!9.45e-13!69;UBERON:0006238!9.45e-13!69;UBERON:0002020!1.19e-12!34;UBERON:0003528!1.19e-12!34;UBERON:0001893!1.32e-12!34;UBERON:0001049!6.18e-12!57;UBERON:0005068!6.18e-12!57;UBERON:0006241!6.18e-12!57;UBERON:0007135!6.18e-12!57;UBERON:0002616!1.89e-11!59;UBERON:0000073!2.26e-11!94;UBERON:0001016!2.26e-11!94;UBERON:0001950!4.90e-11!20;UBERON:0001869!6.07e-11!32;UBERON:0002780!3.30e-10!41;UBERON:0001890!3.30e-10!41;UBERON:0006240!3.30e-10!41;UBERON:0002619!5.33e-10!22;UBERON:0003075!6.22e-10!86;UBERON:0007284!6.22e-10!86;UBERON:0003080!6.26e-10!42;UBERON:0002346!2.32e-09!90;UBERON:0000956!9.63e-09!25;UBERON:0000203!9.63e-09!25;UBERON:0003056!7.60e-08!61;UBERON:0002771!1.15e-07!3;UBERON:0000988!1.51e-07!3;UBERON:0000033!6.28e-07!123;UBERON:0002134!6.96e-07!1;UBERON:0005208!6.96e-07!1;UBERON:0005946!6.96e-07!1;UBERON:0005965!6.96e-07!1;UBERON:0002078!6.96e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;4.21e-21;5!UBERON:0005388;4.21e-21;5!UBERON:0001802;4.21e-21;5!UBERON:0002331;3.02e-11;10!UBERON:0000178;5.93e-08;15!UBERON:0000179;5.93e-08;15!UBERON:0000463;5.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,7.67e-18,6;UBERON:0005388,7.67e-18,6;UBERON:0001802,7.67e-18,6;UBERON:0002331,3.02e-11,10;UBERON:0000358,3.02e-11,10;UBERON:0000307,3.02e-11,10;UBERON:0000091,3.02e-11,10;UBERON:0000087,3.02e-11,10;UBERON:0007010,3.02e-11,10;UBERON:0007806,3.02e-11,10;UBERON:0008780,3.02e-11,10;UBERON:0005728,3.02e-11,10;UBERON:0000178,5.93e-08,15;UBERON:0000179,5.93e-08,15;UBERON:0000463,5.93e-08,15 | |||
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|short_description=p@chr2:116000264..116000269,+ | |short_description=p@chr2:116000264..116000269,+ | ||
}} | }} |
Latest revision as of 23:44, 28 July 2015
Short description: | p@chr2:116000264..116000269, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:116000264..116000269, + |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood cell | 2.37e-10 | 11 |
glial cell (sensu Vertebrata) | 3.38e-07 | 15 |
glial cell | 3.38e-07 | 15 |
glioblast | 3.38e-07 | 15 |
glioblast (sensu Vertebrata) | 3.38e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
retina | 7.67e-18 | 6 |
photoreceptor array | 7.67e-18 | 6 |
posterior segment of eyeball | 7.67e-18 | 6 |
umbilical cord | 3.02e-11 | 10 |
blastocyst | 3.02e-11 | 10 |
blastula | 3.02e-11 | 10 |
bilaminar disc | 3.02e-11 | 10 |
inner cell mass | 3.02e-11 | 10 |
cleaving embryo | 3.02e-11 | 10 |
connecting stalk | 3.02e-11 | 10 |
inner cell mass derived epiblast | 3.02e-11 | 10 |
extraembryonic mesoderm | 3.02e-11 | 10 |
blood | 5.93e-08 | 15 |
haemolymphatic fluid | 5.93e-08 | 15 |
organism substance | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.22e-09 | 11 |