FFCP PHASE1:Hg19::chr2:196521674..196521689,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57181 | |EntrezGene=57181 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20861 | |HGNC=20861 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z341 | |UniProt=F2Z341 | ||
|association_with_transcript=39bp_to_ENST00000444421_5end | |association_with_transcript=39bp_to_ENST00000444421_5end | ||
|cluster_id=chr2:196521674..196521689,+ | |||
|coexpression_cluster_id=C4164 | |coexpression_cluster_id=C4164 | ||
|description=CAGE_peak_6_at_SLC39A10_5end | |description=CAGE_peak_6_at_SLC39A10_5end | ||
|id=chr2:196521674..196521689,+ | |id=chr2:196521674..196521689,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.64e-11!32;UBERON:0001893!1.19e-10!34;UBERON:0002020!1.71e-10!34;UBERON:0003528!1.71e-10!34;UBERON:0002619!3.52e-10!22;UBERON:0002791!4.74e-10!33;UBERON:0000956!1.33e-09!25;UBERON:0000203!1.33e-09!25;UBERON:0001950!2.80e-09!20;UBERON:0002780!1.16e-08!41;UBERON:0001890!1.16e-08!41;UBERON:0006240!1.16e-08!41;UBERON:0001049!1.61e-08!57;UBERON:0005068!1.61e-08!57;UBERON:0006241!1.61e-08!57;UBERON:0007135!1.61e-08!57;UBERON:0001737!3.03e-08!9;UBERON:0003080!3.81e-08!42;UBERON:0002616!1.27e-07!59 | |ontology_enrichment_uberon=UBERON:0001869!1.64e-11!32;UBERON:0001893!1.19e-10!34;UBERON:0002020!1.71e-10!34;UBERON:0003528!1.71e-10!34;UBERON:0002619!3.52e-10!22;UBERON:0002791!4.74e-10!33;UBERON:0000956!1.33e-09!25;UBERON:0000203!1.33e-09!25;UBERON:0001950!2.80e-09!20;UBERON:0002780!1.16e-08!41;UBERON:0001890!1.16e-08!41;UBERON:0006240!1.16e-08!41;UBERON:0001049!1.61e-08!57;UBERON:0005068!1.61e-08!57;UBERON:0006241!1.61e-08!57;UBERON:0007135!1.61e-08!57;UBERON:0001737!3.03e-08!9;UBERON:0003080!3.81e-08!42;UBERON:0002616!1.27e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.86e-21;9!UBERON:0001557;2.86e-21;9!UBERON:0002619;9.60e-21;22!UBERON:0001950;2.24e-20;20!UBERON:0000956;7.89e-18;25!UBERON:0000203;7.89e-18;25!UBERON:0001869;6.11e-16;32!UBERON:0001893;1.20e-14;34!UBERON:0002791;8.26e-14;32!UBERON:0000200;4.98e-13;6!UBERON:0003528;7.65e-13;34!UBERON:0002020;7.65e-13;34!UBERON:0002780;3.34e-09;41!UBERON:0001890;3.34e-09;41!UBERON:0001871;1.08e-07;6!UBERON:0001872;1.37e-07;5!UBERON:0001870;1.46e-07;3!UBERON:0000349;2.10e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.08e-21,9;UBERON:0002619,3.39e-21,22;UBERON:0001950,8.58e-21,20;UBERON:0000956,3.20e-18,25;UBERON:0000203,3.20e-18,25;UBERON:0001869,1.58e-17,32;UBERON:0001893,3.12e-16,34;UBERON:0002791,2.21e-15,32;UBERON:0003528,3.12e-14,34;UBERON:0002020,3.12e-14,34;UBERON:0000200,2.61e-13,6;UBERON:0002780,1.09e-12,41;UBERON:0001890,1.09e-12,41;UBERON:0003080,1.09e-12,41;UBERON:0006240,1.09e-12,41;UBERON:0000073,7.05e-10,53;UBERON:0002616,7.05e-10,53;UBERON:0001049,4.22e-09,56;UBERON:0005068,4.22e-09,56;UBERON:0006241,4.22e-09,56;UBERON:0007135,4.22e-09,56;UBERON:0001557,6.59e-09,19;UBERON:0000955,2.18e-08,68;UBERON:0006238,2.18e-08,68;UBERON:0001871,6.27e-08,6;UBERON:0001870,1.13e-07,3;UBERON:0001872,1.23e-07,5;UBERON:0000349,1.62e-07,5;UBERON:0001017,3.99e-07,81;UBERON:0003056,4.22e-07,61 | |||
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| ||
|short_description=p6@SLC39A10 | |short_description=p6@SLC39A10 | ||
}} | }} |
Latest revision as of 06:09, 19 September 2015
Short description: | p6@SLC39A10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC39A10_5end |
Coexpression cluster: | C4164_medial_amygdala_frontal_Mast_Hep2_paracentral_parietal |
Association with transcript: | 39bp_to_ENST00000444421_5end |
EntrezGene: | SLC39A10 |
HGNC: | 20861 |
UniProt: | F2Z341 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 3.08e-21 | 9 |
regional part of cerebral cortex | 3.39e-21 | 22 |
neocortex | 8.58e-21 | 20 |
cerebral cortex | 3.20e-18 | 25 |
pallium | 3.20e-18 | 25 |
cerebral hemisphere | 1.58e-17 | 32 |
telencephalon | 3.12e-16 | 34 |
regional part of telencephalon | 2.21e-15 | 32 |
brain grey matter | 3.12e-14 | 34 |
gray matter | 3.12e-14 | 34 |
gyrus | 2.61e-13 | 6 |
regional part of forebrain | 1.09e-12 | 41 |
forebrain | 1.09e-12 | 41 |
anterior neural tube | 1.09e-12 | 41 |
future forebrain | 1.09e-12 | 41 |
regional part of nervous system | 7.05e-10 | 53 |
regional part of brain | 7.05e-10 | 53 |
neural tube | 4.22e-09 | 56 |
neural rod | 4.22e-09 | 56 |
future spinal cord | 4.22e-09 | 56 |
neural keel | 4.22e-09 | 56 |
upper respiratory tract | 6.59e-09 | 19 |
brain | 2.18e-08 | 68 |
future brain | 2.18e-08 | 68 |
temporal lobe | 6.27e-08 | 6 |
frontal cortex | 1.13e-07 | 3 |
parietal lobe | 1.23e-07 | 5 |
limbic system | 1.62e-07 | 5 |
central nervous system | 3.99e-07 | 81 |
pre-chordal neural plate | 4.22e-07 | 61 |