FFCP PHASE1:Hg19::chr3:5372381..5372394,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:5372381..5372394,+ | |||
|coexpression_cluster_id=C69 | |coexpression_cluster_id=C69 | ||
|description=CAGE_peak_at_chr3:5372381..5372394,+ | |description=CAGE_peak_at_chr3:5372381..5372394,+ | ||
|id=chr3:5372381..5372394,+ | |id=chr3:5372381..5372394,+ | ||
|ontology_enrichment_celltype=CL:0001014!3.67e-20!2;CL:0001016!3.67e-20!2;CL:0000319!7.46e-11!1;CL:0002379!8.22e-11!1;CL:0000453!1.27e-08!5;CL:1000507!1.06e-07!12;CL:1000494!1.06e-07!12;CL:0000840!2.53e-07!5;CL:0001029!2.53e-07!5 | |ontology_enrichment_celltype=CL:0001014!3.67e-20!2;CL:0001016!3.67e-20!2;CL:0000319!7.46e-11!1;CL:0002379!8.22e-11!1;CL:0000453!1.27e-08!5;CL:1000507!1.06e-07!12;CL:1000494!1.06e-07!12;CL:0000840!2.53e-07!5;CL:0001029!2.53e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000062;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,2.47e-07,11;CL:0000375,2.47e-07,11;CL:0000335,2.47e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;2.55e-07;11 | |||
|ontology_enrichment_disease=DOID:3347!2.79e-11!1;DOID:0060060!3.41e-11!1;DOID:0060061!3.41e-11!1;DOID:8691!3.41e-11!1;DOID:3030!7.46e-11!1;DOID:3620!8.22e-11!1;DOID:3565!8.22e-11!1 | |ontology_enrichment_disease=DOID:3347!2.79e-11!1;DOID:0060060!3.41e-11!1;DOID:0060061!3.41e-11!1;DOID:8691!3.41e-11!1;DOID:3030!7.46e-11!1;DOID:3620!8.22e-11!1;DOID:3565!8.22e-11!1 | ||
|ontology_enrichment_disease_v019=DOID:3347;3.34e-66;1!DOID:201;2.59e-12;6!DOID:0060100;2.59e-12;6!DOID:0060058;5.73e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,2.39e-66,1;DOID:201,2.45e-12,6;DOID:0060100,2.45e-12,6;DOID:0060058,5.73e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0009773!1.06e-07!12;UBERON:0001231!1.06e-07!12;UBERON:0004810!1.06e-07!12 | |ontology_enrichment_uberon=UBERON:0009773!1.06e-07!12;UBERON:0001231!1.06e-07!12;UBERON:0004810!1.06e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.96e-34;2!UBERON:0002757;5.96e-34;2!UBERON:0010134;5.96e-34;2!UBERON:0005408;5.96e-34;2!UBERON:0001899;5.96e-34;2!UBERON:0003296;9.45e-18;4!UBERON:0010133;9.45e-18;4!UBERON:0002784;9.45e-18;4!UBERON:0001894;9.43e-11;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.05e-34,2;UBERON:0002757,7.05e-34,2;UBERON:0010134,7.05e-34,2;UBERON:0005408,7.05e-34,2;UBERON:0001899,7.05e-34,2;UBERON:0003296,1.03e-17,4;UBERON:0010133,1.03e-17,4;UBERON:0002784,1.03e-17,4;UBERON:0001894,9.89e-11,7;UBERON:0006222,9.89e-11,7 | |||
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|short_description=p@chr3:5372381..5372394,+ | |short_description=p@chr3:5372381..5372394,+ | ||
}} | }} |
Latest revision as of 22:36, 29 July 2015
Short description: | p@chr3:5372381..5372394, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:5372381..5372394, + |
Coexpression cluster: | C69_anaplastic_CD14_cord_hairy_mycosis_adult_NK |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 2.47e-07 | 11 |
osteoprogenitor cell | 2.47e-07 | 11 |
mesenchyme condensation cell | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
pineal body | 7.05e-34 | 2 |
regional part of epithalamus | 7.05e-34 | 2 |
secretory circumventricular organ | 7.05e-34 | 2 |
circumventricular organ | 7.05e-34 | 2 |
epithalamus | 7.05e-34 | 2 |
gland of diencephalon | 1.03e-17 | 4 |
neuroendocrine gland | 1.03e-17 | 4 |
regional part of diencephalon | 1.03e-17 | 4 |
diencephalon | 9.89e-11 | 7 |
future diencephalon | 9.89e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 2.39e-66 | 1 |
connective tissue cancer | 2.45e-12 | 6 |
musculoskeletal system cancer | 2.45e-12 | 6 |
lymphoma | 5.73e-08 | 10 |