FFCP PHASE1:Hg19::chr4:103496453..103496481,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:103496453..103496481,+ | |||
|coexpression_cluster_id=C426 | |coexpression_cluster_id=C426 | ||
|description=CAGE_peak_at_chr4:103496453..103496481,+ | |description=CAGE_peak_at_chr4:103496453..103496481,+ | ||
|id=chr4:103496453..103496481,+ | |id=chr4:103496453..103496481,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.37e-33!140;CL:0002057!4.19e-30!42;CL:0000860!1.15e-28!45;CL:0000766!1.70e-28!76;CL:0000037!6.84e-27!172;CL:0000566!6.84e-27!172;CL:0002032!5.08e-26!165;CL:0000837!5.08e-26!165;CL:0002087!5.15e-25!119;CL:0002031!2.35e-24!124;CL:0000988!5.76e-24!182;CL:0000557!1.91e-22!71;CL:0002009!7.88e-22!65;CL:0000763!2.57e-21!112;CL:0000049!2.57e-21!112;CL:0000839!3.90e-20!70;CL:0002194!5.46e-20!63;CL:0000576!5.46e-20!63;CL:0000040!5.46e-20!63;CL:0000559!5.46e-20!63;CL:0000134!2.73e-11!358;CL:0002320!1.54e-10!365;CL:0000094!1.89e-10!8;CL:0000219!4.53e-09!390;CL:0000081!5.13e-07!11;CL:0000048!9.00e-07!430 | |ontology_enrichment_celltype=CL:0000738!1.37e-33!140;CL:0002057!4.19e-30!42;CL:0000860!1.15e-28!45;CL:0000766!1.70e-28!76;CL:0000037!6.84e-27!172;CL:0000566!6.84e-27!172;CL:0002032!5.08e-26!165;CL:0000837!5.08e-26!165;CL:0002087!5.15e-25!119;CL:0002031!2.35e-24!124;CL:0000988!5.76e-24!182;CL:0000557!1.91e-22!71;CL:0002009!7.88e-22!65;CL:0000763!2.57e-21!112;CL:0000049!2.57e-21!112;CL:0000839!3.90e-20!70;CL:0002194!5.46e-20!63;CL:0000576!5.46e-20!63;CL:0000040!5.46e-20!63;CL:0000559!5.46e-20!63;CL:0000134!2.73e-11!358;CL:0002320!1.54e-10!365;CL:0000094!1.89e-10!8;CL:0000219!4.53e-09!390;CL:0000081!5.13e-07!11;CL:0000048!9.00e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.74e-58;33!CL:0002057;1.74e-58;33!CL:0000473;5.20e-40;39!CL:0000234;5.20e-40;39!CL:0000576;1.92e-34;48!CL:0000766;8.71e-22;69!CL:0002087;7.21e-20;104!CL:0000623;3.10e-14;3!CL:0000738;3.78e-13;136!CL:0000763;7.43e-11;100!CL:0000771;1.23e-10;2!CL:0000988;9.45e-08;177!CL:0002393;9.79e-08;6!CL:0002397;9.79e-08;6!CL:0000226;7.30e-07;3!CL:0000842;7.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.68e-65,42;CL:0002057,9.68e-65,42;CL:0000473,6.37e-56,48;CL:0000234,6.37e-56,48;CL:0000738,2.17e-50,136;CL:0002087,4.47e-48,115;CL:0002009,9.08e-46,61;CL:0000766,8.14e-45,72;CL:0002194,1.42e-43,59;CL:0000576,1.42e-43,59;CL:0000040,1.42e-43,59;CL:0000559,1.42e-43,59;CL:0002031,2.53e-43,120;CL:0000557,3.37e-41,67;CL:0000037,2.22e-39,168;CL:0000839,2.05e-38,66;CL:0002032,5.08e-37,161;CL:0000837,5.08e-37,161;CL:0000988,5.39e-37,177;CL:0000763,2.83e-30,108;CL:0000049,2.83e-30,108;CL:0000134,1.39e-14,354;CL:0000623,2.83e-14,3;CL:0000825,2.83e-14,3;CL:0002320,3.81e-14,361;CL:0000219,1.34e-12,386;CL:0000771,9.21e-11,2;CL:0000048,1.05e-10,427;CL:0000723,1.92e-10,433;CL:0000034,4.17e-10,441;CL:0000838,3.59e-07,52;CL:0000542,5.29e-07,53;CL:0000051,5.29e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-47;42!CL:0000049;2.21e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.84e-18!80;UBERON:0001474!4.96e-17!86;UBERON:0002390!5.62e-17!102;UBERON:0003061!5.62e-17!102;UBERON:0002405!7.00e-16!115;UBERON:0002193!8.06e-16!112;UBERON:0004765!4.26e-14!101;UBERON:0001434!4.26e-14!101;UBERON:0002384!9.44e-11!375 | |ontology_enrichment_uberon=UBERON:0002371!2.84e-18!80;UBERON:0001474!4.96e-17!86;UBERON:0002390!5.62e-17!102;UBERON:0003061!5.62e-17!102;UBERON:0002405!7.00e-16!115;UBERON:0002193!8.06e-16!112;UBERON:0004765!4.26e-14!101;UBERON:0001434!4.26e-14!101;UBERON:0002384!9.44e-11!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.11e-35,76;UBERON:0001474,1.15e-32,82;UBERON:0002390,5.40e-31,98;UBERON:0003061,5.40e-31,98;UBERON:0004765,2.89e-29,90;UBERON:0002405,3.86e-28,93;UBERON:0002193,1.44e-27,108;UBERON:0001434,8.98e-26,100;UBERON:0003081,4.29e-14,203;UBERON:0002384,1.51e-13,371;UBERON:0002204,3.97e-13,167;UBERON:0000926,8.46e-07,315;UBERON:0004120,8.46e-07,315;UBERON:0006603,8.46e-07,315 | |||
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| ||
|short_description=p@chr4:103496453..103496481,+ | |short_description=p@chr4:103496453..103496481,+ | ||
}} | }} |
Latest revision as of 00:31, 30 July 2015
Short description: | p@chr4:103496453..103496481, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:103496453..103496481, + |
Coexpression cluster: | C426_CD4_CD14_Neutrophils_CD8_Natural_Mast_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.11e-35 | 76 |
bone element | 1.15e-32 | 82 |
hematopoietic system | 5.40e-31 | 98 |
blood island | 5.40e-31 | 98 |
skeletal element | 2.89e-29 | 90 |
immune system | 3.86e-28 | 93 |
hemolymphoid system | 1.44e-27 | 108 |
skeletal system | 8.98e-26 | 100 |
lateral plate mesoderm | 4.29e-14 | 203 |
connective tissue | 1.51e-13 | 371 |
musculoskeletal system | 3.97e-13 | 167 |
mesoderm | 8.46e-07 | 315 |
mesoderm-derived structure | 8.46e-07 | 315 |
presumptive mesoderm | 8.46e-07 | 315 |