FFCP PHASE1:Hg19::chr19:39894772..39894785,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:39894772..39894785,+
|short_description=p@chr19:39894772..39894785,+
|description=CAGE_peak_at_chr19:39894772..39894785,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:39894772..39894785,+ | |||
|coexpression_cluster_id=C1214 | |||
|description=CAGE_peak_at_chr19:39894772..39894785,+ | |||
|id=chr19:39894772..39894785,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.58e-62!140;CL:0002057!6.81e-57!42;CL:0000860!4.18e-52!45;CL:0002087!1.08e-48!119;CL:0002031!1.06e-47!124;CL:0000037!1.95e-47!172;CL:0000566!1.95e-47!172;CL:0000766!3.11e-47!76;CL:0000988!1.24e-44!182;CL:0002032!2.28e-41!165;CL:0000837!2.28e-41!165;CL:0000557!8.68e-40!71;CL:0002009!4.40e-38!65;CL:0000839!9.10e-37!70;CL:0002194!8.30e-36!63;CL:0000576!8.30e-36!63;CL:0000040!8.30e-36!63;CL:0000559!8.30e-36!63;CL:0000763!4.36e-29!112;CL:0000049!4.36e-29!112;CL:0000134!2.08e-19!358;CL:0002320!4.00e-19!365;CL:0000219!6.58e-16!390;CL:0002393!8.13e-15!9;CL:0002397!8.13e-15!9;CL:0000048!3.79e-13!430;CL:0000034!4.84e-13!444;CL:0000723!1.35e-12!436;CL:0000542!6.50e-11!53;CL:0000051!6.50e-11!53;CL:0000094!1.14e-10!8;CL:0000838!2.88e-10!52;CL:0000791!1.12e-09!18;CL:0000789!1.12e-09!18;CL:0002420!1.12e-09!18;CL:0002419!1.12e-09!18;CL:0000790!1.12e-09!18;CL:0000081!3.76e-09!11;CL:0000624!6.12e-09!6;CL:0000084!3.34e-07!25;CL:0000827!3.34e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.07e-54;33!CL:0002057;8.07e-54;33!CL:0000576;5.12e-43;48!CL:0000473;7.33e-39;39!CL:0000234;7.33e-39;39!CL:0000766;1.77e-38;69!CL:0002087;4.66e-21;104!CL:0002393;1.52e-18;6!CL:0002397;1.52e-18;6!CL:0000094;2.16e-18;8!CL:0000763;1.59e-15;100!CL:0000738;5.95e-14;136!CL:0000081;4.71e-13;11!CL:0000988;8.85e-12;177!CL:0000623;1.95e-10;3!CL:0000226;8.83e-10;3!CL:0000842;8.83e-10;3!CL:0000767;2.71e-09;3!CL:0000875;9.14e-09;3!CL:0002396;9.14e-09;3!CL:0000219;5.10e-08;193!CL:0000771;1.21e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.25e-84,42;CL:0002057,1.25e-84,42;CL:0000738,4.11e-80,136;CL:0000766,1.70e-77,72;CL:0000473,9.05e-73,48;CL:0000234,9.05e-73,48;CL:0000037,3.35e-62,168;CL:0000557,4.04e-61,67;CL:0000839,4.80e-59,66;CL:0000988,2.54e-58,177;CL:0002087,3.24e-58,115;CL:0002031,1.05e-57,120;CL:0002009,3.69e-57,61;CL:0002194,3.57e-56,59;CL:0000576,3.57e-56,59;CL:0000040,3.57e-56,59;CL:0000559,3.57e-56,59;CL:0002032,2.97e-54,161;CL:0000837,2.97e-54,161;CL:0000763,4.10e-50,108;CL:0000049,4.10e-50,108;CL:0002393,1.45e-25,9;CL:0002397,1.45e-25,9;CL:0000134,5.99e-24,354;CL:0002320,3.37e-23,361;CL:0000219,1.49e-20,386;CL:0000094,1.98e-18,8;CL:0000048,2.56e-17,427;CL:0000034,3.37e-17,441;CL:0000723,7.15e-17,433;CL:0000081,4.43e-13,11;CL:0000623,1.87e-10,3;CL:0000825,1.87e-10,3;CL:0000226,8.21e-10,3;CL:0000842,8.21e-10,3;CL:0000767,2.56e-09,3;CL:0000875,9.41e-09,3;CL:0002396,9.41e-09,3;CL:0000771,1.21e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.21e-60;42!CL:0000049;1.86e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.22e-37!102;UBERON:0003061!3.22e-37!102;UBERON:0002371!6.13e-37!80;UBERON:0001474!3.16e-33!86;UBERON:0002193!3.07e-32!112;UBERON:0004765!4.06e-27!101;UBERON:0001434!4.06e-27!101;UBERON:0002405!5.64e-24!115;UBERON:0002384!7.12e-18!375;UBERON:0003081!1.31e-12!216;UBERON:0002204!2.51e-12!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.11e-52,76;UBERON:0001474,4.46e-48,82;UBERON:0002390,5.95e-48,98;UBERON:0003061,5.95e-48,98;UBERON:0004765,6.97e-43,90;UBERON:0002193,1.80e-42,108;UBERON:0002405,3.64e-41,93;UBERON:0001434,1.49e-37,100;UBERON:0002384,3.56e-22,371;UBERON:0002204,2.58e-18,167;UBERON:0003081,2.52e-17,203;UBERON:0000926,2.11e-07,315;UBERON:0004120,2.11e-07,315;UBERON:0006603,2.11e-07,315 | |||
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| ||
|short_description=p@chr19:39894772..39894785,+ | |||
}} | }} |
Latest revision as of 07:35, 26 July 2015
Short description: | p@chr19:39894772..39894785, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39894772..39894785, + |
Coexpression cluster: | C1214_Eosinophils_Natural_CD14_Basophils_Neutrophils_Mast_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.11e-52 | 76 |
bone element | 4.46e-48 | 82 |
hematopoietic system | 5.95e-48 | 98 |
blood island | 5.95e-48 | 98 |
skeletal element | 6.97e-43 | 90 |
hemolymphoid system | 1.80e-42 | 108 |
immune system | 3.64e-41 | 93 |
skeletal system | 1.49e-37 | 100 |
connective tissue | 3.56e-22 | 371 |
musculoskeletal system | 2.58e-18 | 167 |
lateral plate mesoderm | 2.52e-17 | 203 |
mesoderm | 2.11e-07 | 315 |
mesoderm-derived structure | 2.11e-07 | 315 |
presumptive mesoderm | 2.11e-07 | 315 |