FFCP PHASE1:Hg19::chr6:16238704..16238715,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2766 | |EntrezGene=2766 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4376 | |HGNC=4376 | ||
|TSSclassifier=strong | |||
|UniProt=P36959 | |UniProt=P36959 | ||
|association_with_transcript=-95bp_to_ENST00000259727,NM_006877,uc003nbs.2_5end | |association_with_transcript=-95bp_to_ENST00000259727,NM_006877,uc003nbs.2_5end | ||
|cluster_id=chr6:16238704..16238715,+ | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_4_at_GMPR_5end | |description=CAGE_peak_4_at_GMPR_5end | ||
|id=chr6:16238704..16238715,+ | |id=chr6:16238704..16238715,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.32e-14;2!CL:0000558;1.32e-14;2!CL:0002032;8.98e-08;1!CL:0000557;8.98e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.20e-14,2;CL:0000765,1.20e-14,2;CL:0000050,1.20e-14,2;CL:0000038,1.20e-14,2;CL:0000558,1.20e-14,2;CL:0000547,1.20e-14,2;CL:0000549,1.20e-14,2;CL:0000550,1.20e-14,2;CL:0000552,1.20e-14,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!2.97e-07!8 | |ontology_enrichment_disease=DOID:1036!2.97e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.68e-09;31!DOID:1036;3.84e-08;8!DOID:8552;5.40e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.07e-09,31;DOID:1036,4.24e-08,8;DOID:8552,6.19e-08,1;DOID:1240,1.54e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-27!115;UBERON:0000178!1.80e-08!15;UBERON:0000179!1.80e-08!15;UBERON:0000463!1.80e-08!15 | |ontology_enrichment_uberon=UBERON:0007023!1.26e-27!115;UBERON:0000178!1.80e-08!15;UBERON:0000179!1.80e-08!15;UBERON:0000463!1.80e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.41e-36;15!UBERON:0000179;2.41e-36;15!UBERON:0000463;2.41e-36;15!UBERON:0002390;1.27e-22;32!UBERON:0002193;1.11e-11;42!UBERON:0001389;5.40e-08;1!UBERON:0000026;5.40e-08;1!UBERON:0008784;5.40e-08;1!UBERON:0006058;5.40e-08;1!UBERON:0003663;5.40e-08;1!UBERON:0004256;5.40e-08;1!UBERON:0004708;5.40e-08;1!UBERON:0002101;5.40e-08;1!UBERON:0004709;5.40e-08;1!UBERON:0002529;5.40e-08;1!UBERON:0010538;5.40e-08;1!UBERON:0003661;5.40e-08;1!UBERON:0010890;5.40e-08;1!UBERON:0002471;5.40e-08;1!UBERON:0001383;5.40e-08;1!UBERON:0010758;5.40e-08;1!UBERON:0010707;5.40e-08;1!UBERON:0000978;5.40e-08;1!UBERON:0002103;5.40e-08;1!UBERON:0001665;5.40e-08;1!UBERON:0003823;5.40e-08;1!UBERON:0000154;5.40e-08;1!UBERON:0010709;5.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.51e-36,15;UBERON:0000179,2.51e-36,15;UBERON:0000463,2.51e-36,15;UBERON:0007023,4.43e-12,114;UBERON:0005418,5.40e-08,1;UBERON:0001389,5.40e-08,1;UBERON:0000026,5.40e-08,1;UBERON:0008784,5.40e-08,1;UBERON:0006058,5.40e-08,1;UBERON:0003663,5.40e-08,1;UBERON:0004256,5.40e-08,1;UBERON:0004708,5.40e-08,1;UBERON:0002101,5.40e-08,1;UBERON:0004709,5.40e-08,1;UBERON:0002529,5.40e-08,1;UBERON:0010538,5.40e-08,1;UBERON:0003661,5.40e-08,1;UBERON:0010890,5.40e-08,1;UBERON:0002471,5.40e-08,1;UBERON:0001383,5.40e-08,1;UBERON:0004357,5.40e-08,1;UBERON:0004347,5.40e-08,1;UBERON:0005420,5.40e-08,1;UBERON:0005732,5.40e-08,1;UBERON:0010758,5.40e-08,1;UBERON:0010707,5.40e-08,1;UBERON:0000978,5.40e-08,1;UBERON:0002103,5.40e-08,1;UBERON:0001665,5.40e-08,1;UBERON:0003823,5.40e-08,1;UBERON:0000154,5.40e-08,1;UBERON:0010709,5.40e-08,1;UBERON:0005733,5.40e-08,1;UBERON:0005730,5.40e-08,1;UBERON:0002390,1.08e-07,98;UBERON:0003061,1.08e-07,98;UBERON:0002193,8.67e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.152826811495903,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0.371457501329565,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,1.23267807618516,0.207328115540772,0,0.12624243342638,0.761974731506028,0.381988425558278,3.51652341630141,0,0.205654985406647,0,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0.340187410553031,0,0,0,0,0.254876273045038,0,0,4.16593765627276,3.66009631434861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6563997938756,14.5281069357051,14.2411796793541,6.19402616190251,4.11362273086194,7.78167973431261,15.1208802426672,12.6900028207083,0,0,0,0,0,0,0,0.199579371432817,0,1.2700414963433,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.556812347790485,0,3.2454681417118,0,2.81974010175699,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,14.3689855408164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,2.49317522850235,0.451191321234361,0.784250137270958,1.00692952185506,0.569261198172555,5.72171684329363,0,0,0.141353071433941,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0.394584402849391,0,0,0,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0.288950589901519,0.600420288709789,0,1.27746588066972,0,0,0,0,0,0,0.429226048136571,1.11585728720936,0.604651252380536,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0.137539436597234,0,0,0.77380195455795,0,0,0.394028536495991,0.524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,6.73158670144579,0,0,0.146552233678082,2.65013777824443,0.129282956361551,0.39669780522807,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,1.72022758707021,0.443716206147409,0.18628920882415,0,0,0.303298235083296,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,0,0,0.354809480650555,0.230467975111559,0,0,0.0657727735628491,0,0,0.313972371402056,0,0,0,0,0,0.285906176706625,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58971534875158,1.33461648913121,0,0,0.701818390386317,2.58636007709779,0,0,0.109940516745429,0.301925687133347,0,0,0,0,0,0,0,0,0,0.0939839179798536,1.09578409555081,0,0,0,0,0.730336388246517,0,0.286679166302903,0.157771562193185,0.0679914901909147,0.436350690340377,0.5290268405154,0,0,0,0,0,0.886889507080059,0.101988829741982,0,0,0.752122617877125,0.606229585745915,0.535928260312357,0.829169439458779,0.20686599172379,0,0.23806443146374,0.0645889098360061,0.186224142887574,0,0.12729431655633,0,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.152826811495903,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0.371457501329565,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,1.23267807618516,0.207328115540772,0,0.12624243342638,0.761974731506028,0.381988425558278,3.51652341630141,0,0.205654985406647,0,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0.340187410553031,0,0,0,0,0.254876273045038,0,0,4.16593765627276,3.66009631434861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6563997938756,14.5281069357051,14.2411796793541,6.19402616190251,4.11362273086194,7.78167973431261,15.1208802426672,12.6900028207083,0,0,0,0,0,0,0,0.199579371432817,0,1.2700414963433,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.556812347790485,0,3.2454681417118,0,2.81974010175699,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,14.3689855408164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,2.49317522850235,0.451191321234361,0.784250137270958,1.00692952185506,0.569261198172555,5.72171684329363,0,0,0.141353071433941,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0.394584402849391,0,0,0,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0.288950589901519,0.600420288709789,0,1.27746588066972,0,0,0,0,0,0,0.429226048136571,1.11585728720936,0.604651252380536,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0.137539436597234,0,0,0.77380195455795,0,0,0.394028536495991,0.524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,6.73158670144579,0,0,0.146552233678082,2.65013777824443,0.129282956361551,0.39669780522807,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,1.72022758707021,0.443716206147409,0.18628920882415,0,0,0.303298235083296,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,0,0,0.354809480650555,0.230467975111559,0,0,0.0657727735628491,0,0,0.313972371402056,0,0,0,0,0,0.285906176706625,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58971534875158,1.33461648913121,0,0,0.701818390386317,2.58636007709779,0,0,0.109940516745429,0.301925687133347,0,0,0,0,0,0,0,0,0,0.0939839179798536,1.09578409555081,0,0,0,0,0.730336388246517,0,0.286679166302903,0.157771562193185,0.0679914901909147,0.436350690340377,0.5290268405154,0,0,0,0,0,0.886889507080059,0.101988829741982,0,0,0.752122617877125,0.606229585745915,0.535928260312357,0.829169439458779,0.20686599172379,0,0.23806443146374,0.0645889098360061,0.186224142887574,0,0.12729431655633,0,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p4@GMPR | |short_description=p4@GMPR | ||
}} | }} |
Latest revision as of 17:32, 16 September 2015
Short description: | p4@GMPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GMPR_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -95bp_to_ENST00000259727, NM_006877, uc003nbs.2_5end |
EntrezGene: | GMPR |
HGNC: | 4376 |
UniProt: | P36959 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.20e-14 | 2 |
erythroblast | 1.20e-14 | 2 |
megakaryocyte-erythroid progenitor cell | 1.20e-14 | 2 |
erythroid progenitor cell | 1.20e-14 | 2 |
reticulocyte | 1.20e-14 | 2 |
proerythroblast | 1.20e-14 | 2 |
basophilic erythroblast | 1.20e-14 | 2 |
polychromatophilic erythroblast | 1.20e-14 | 2 |
orthochromatic erythroblast | 1.20e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.51e-36 | 15 |
haemolymphatic fluid | 2.51e-36 | 15 |
organism substance | 2.51e-36 | 15 |
adult organism | 4.43e-12 | 114 |
hindlimb bud | 5.40e-08 | 1 |
soleus muscle | 5.40e-08 | 1 |
appendage | 5.40e-08 | 1 |
lower limb segment | 5.40e-08 | 1 |
multi-limb segment region | 5.40e-08 | 1 |
hindlimb muscle | 5.40e-08 | 1 |
hindlimb zeugopod muscle | 5.40e-08 | 1 |
paired limb/fin | 5.40e-08 | 1 |
limb | 5.40e-08 | 1 |
pelvic appendage | 5.40e-08 | 1 |
limb segment | 5.40e-08 | 1 |
paired limb/fin segment | 5.40e-08 | 1 |
limb muscle | 5.40e-08 | 1 |
pelvic complex muscle | 5.40e-08 | 1 |
zeugopod | 5.40e-08 | 1 |
muscle of leg | 5.40e-08 | 1 |
paired limb/fin bud | 5.40e-08 | 1 |
limb bud | 5.40e-08 | 1 |
pelvic appendage bud | 5.40e-08 | 1 |
limb/fin field | 5.40e-08 | 1 |
subdivision of organism along appendicular axis | 5.40e-08 | 1 |
appendage girdle complex | 5.40e-08 | 1 |
leg | 5.40e-08 | 1 |
hindlimb | 5.40e-08 | 1 |
triceps surae | 5.40e-08 | 1 |
hindlimb zeugopod | 5.40e-08 | 1 |
posterior region of body | 5.40e-08 | 1 |
pelvic complex | 5.40e-08 | 1 |
limb field | 5.40e-08 | 1 |
hindlimb/pelvic fin field | 5.40e-08 | 1 |
hematopoietic system | 1.08e-07 | 98 |
blood island | 1.08e-07 | 98 |
hemolymphoid system | 8.67e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.07e-09 | 31 |
chronic leukemia | 4.24e-08 | 8 |
chronic myeloid leukemia | 6.19e-08 | 1 |
leukemia | 1.54e-07 | 39 |