FFCP PHASE1:Hg19::chr7:114054885..114054910,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93986 | |EntrezGene=93986 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13875 | |HGNC=13875 | ||
|TSSclassifier=strong | |||
|UniProt=B4DLD9,Q75MZ5,B7ZLK5,O15409 | |UniProt=B4DLD9,Q75MZ5,B7ZLK5,O15409 | ||
|association_with_transcript=-141bp_to_ENST00000403559,ENST00000408937,ENST00000462331,NM_001172766,NM_014491,NM_148898,NM_148900,NR_033767,uc003vgw.2,uc003vgx.2,uc003vgz.2,uc003vha.2,uc003vhb.2,uc011kmu.1,uc011kmv.1_5end | |association_with_transcript=-141bp_to_ENST00000403559,ENST00000408937,ENST00000462331,NM_001172766,NM_014491,NM_148898,NM_148900,NR_033767,uc003vgw.2,uc003vgx.2,uc003vgz.2,uc003vha.2,uc003vhb.2,uc011kmu.1,uc011kmv.1_5end | ||
|cluster_id=chr7:114054885..114054910,+ | |||
|coexpression_cluster_id=C48 | |coexpression_cluster_id=C48 | ||
|description=CAGE_peak_4_at_FOXP2_5end | |description=CAGE_peak_4_at_FOXP2_5end | ||
|id=chr7:114054885..114054910,+ | |id=chr7:114054885..114054910,+ | ||
|ontology_enrichment_celltype=CL:0002504!9.92e-08!3;CL:1000279!9.92e-08!3;CL:1000280!9.92e-08!3 | |ontology_enrichment_celltype=CL:0002504!9.92e-08!3;CL:1000279!9.92e-08!3;CL:1000280!9.92e-08!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.83e-08;1!UBERON:0001045;3.83e-08;1!UBERON:0006242;4.71e-08;1!UBERON:0005425;8.12e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-18!115;UBERON:0000059!5.52e-14!11;UBERON:0001155!3.15e-13!9;UBERON:0000160!3.45e-12!27;UBERON:0005409!7.00e-12!35;UBERON:0001950!1.44e-10!20;UBERON:0001869!5.30e-10!32;UBERON:0000956!9.24e-10!25;UBERON:0000203!9.24e-10!25;UBERON:0002791!1.29e-09!33;UBERON:0002619!1.90e-09!22;UBERON:0002020!3.00e-09!34;UBERON:0003528!3.00e-09!34;UBERON:0001893!3.00e-09!34;UBERON:0002780!2.35e-08!41;UBERON:0001890!2.35e-08!41;UBERON:0006240!2.35e-08!41;UBERON:0003080!4.40e-08!42;UBERON:0001872!3.02e-07!5;UBERON:0001049!4.77e-07!57;UBERON:0005068!4.77e-07!57;UBERON:0006241!4.77e-07!57;UBERON:0007135!4.77e-07!57;UBERON:0003075!5.92e-07!86;UBERON:0007284!5.92e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!1.54e-18!115;UBERON:0000059!5.52e-14!11;UBERON:0001155!3.15e-13!9;UBERON:0000160!3.45e-12!27;UBERON:0005409!7.00e-12!35;UBERON:0001950!1.44e-10!20;UBERON:0001869!5.30e-10!32;UBERON:0000956!9.24e-10!25;UBERON:0000203!9.24e-10!25;UBERON:0002791!1.29e-09!33;UBERON:0002619!1.90e-09!22;UBERON:0002020!3.00e-09!34;UBERON:0003528!3.00e-09!34;UBERON:0001893!3.00e-09!34;UBERON:0002780!2.35e-08!41;UBERON:0001890!2.35e-08!41;UBERON:0006240!2.35e-08!41;UBERON:0003080!4.40e-08!42;UBERON:0001872!3.02e-07!5;UBERON:0001049!4.77e-07!57;UBERON:0005068!4.77e-07!57;UBERON:0006241!4.77e-07!57;UBERON:0007135!4.77e-07!57;UBERON:0003075!5.92e-07!86;UBERON:0007284!5.92e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;9.46e-23;17!UBERON:0005409;3.34e-22;22!UBERON:0000059;8.49e-22;11!UBERON:0001155;1.25e-18;9!UBERON:0004921;7.77e-17;33!UBERON:0003714;6.03e-14;2!UBERON:0006834;2.35e-08;1!UBERON:0001154;3.83e-08;1!UBERON:0001153;3.83e-08;1!UBERON:0009854;3.83e-08;1!UBERON:0000996;4.71e-08;1!UBERON:0005795;8.12e-08;1!UBERON:0001000;8.12e-08;1!UBERON:0000941;8.12e-08;1!UBERON:0001785;8.12e-08;1!UBERON:0002464;8.12e-08;1!UBERON:0004904;8.12e-08;1!UBERON:0001021;8.12e-08;1!UBERON:0005352;8.12e-08;1!UBERON:0001555;7.32e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.02e-22,17;UBERON:0000059,8.05e-22,11;UBERON:0005409,1.87e-19,25;UBERON:0001155,1.16e-18,9;UBERON:0003714,6.03e-14,2;UBERON:0007023,2.38e-10,114;UBERON:0001046,6.72e-09,19;UBERON:0006834,2.35e-08,1;UBERON:0004921,2.38e-08,118;UBERON:0001154,4.11e-08,1;UBERON:0001153,4.11e-08,1;UBERON:0001045,4.11e-08,1;UBERON:0000996,5.05e-08,1;UBERON:0000941,6.63e-08,1;UBERON:0001785,6.63e-08,1;UBERON:0002464,6.63e-08,1;UBERON:0004904,6.63e-08,1;UBERON:0001021,6.63e-08,1;UBERON:0003902,6.63e-08,1;UBERON:0005425,6.63e-08,1;UBERON:0001000,9.29e-08,1;UBERON:0005352,9.29e-08,1;UBERON:0001007,2.06e-07,145;UBERON:0001555,2.06e-07,145;UBERON:0007026,2.06e-07,145 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,1.09814811894422,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60861146462687,4.92087437363315,5.17232339306916,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0,1.39473591775749,3.31540698637377,0,0,0,0,0,0,0,10.7521312144258,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,1.52581736317083,0,0,0,0,0,3.92446318369365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,6.81123246675712,8.55442202907076,0,0,0,0,0,0,0,0,0,1.18375320854817,6.04953580243319,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,3.58859361007152,0,0.90392296312213,0,0,0.0633107959558787,0,0,2.98834192635094,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.916641696046735,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11728983594649,0,0,0,0,0,0.128458450192919,0,0,0,0.756215088665154,0,0,1.42769420259154,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,4.16013392107724,0.314231179832004,0,10.0447459256045,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0.385870790539723,1.31135736302374,0,19.8570140620663,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,2.92134555298607,0,0,0.473314686579554,0,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.426467963801962,1.1903221573187,0,0,0,0,0,0,0,0.134704106029175,0.286888821570705,1.66330178273007,0,0,0,0.0898252021065869,0,6.47879654169192,1.22068853494722,2.66302709674205,0,0 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,1.09814811894422,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60861146462687,4.92087437363315,5.17232339306916,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0,1.39473591775749,3.31540698637377,0,0,0,0,0,0,0,10.7521312144258,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,1.52581736317083,0,0,0,0,0,3.92446318369365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,6.81123246675712,8.55442202907076,0,0,0,0,0,0,0,0,0,1.18375320854817,6.04953580243319,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,3.58859361007152,0,0.90392296312213,0,0,0.0633107959558787,0,0,2.98834192635094,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.916641696046735,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11728983594649,0,0,0,0,0,0.128458450192919,0,0,0,0.756215088665154,0,0,1.42769420259154,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,4.16013392107724,0.314231179832004,0,10.0447459256045,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0.385870790539723,1.31135736302374,0,19.8570140620663,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,2.92134555298607,0,0,0.473314686579554,0,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.426467963801962,1.1903221573187,0,0,0,0,0,0,0,0.134704106029175,0.286888821570705,1.66330178273007,0,0,0,0.0898252021065869,0,6.47879654169192,1.22068853494722,2.66302709674205,0,0 | ||
|short_description=p4@FOXP2 | |short_description=p4@FOXP2 | ||
}} | }} |
Latest revision as of 05:59, 25 September 2015
Short description: | p4@FOXP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FOXP2_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -141bp_to_ENST00000403559, ENST00000408937, ENST00000462331, NM_001172766, NM_014491, NM_148898, NM_148900, NR_033767, uc003vgw.2, uc003vgx.2, uc003vgz.2, uc003vha.2, uc003vhb.2, uc011kmu.1, uc011kmv.1_5end |
EntrezGene: | FOXP2 |
HGNC: | 13875 |
UniProt: | B4DLD9Q75MZ5B7ZLK5O15409 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.02e-22 | 17 |
large intestine | 8.05e-22 | 11 |
gastrointestinal system | 1.87e-19 | 25 |
colon | 1.16e-18 | 9 |
neural tissue | 6.03e-14 | 2 |
adult organism | 2.38e-10 | 114 |
hindgut | 6.72e-09 | 19 |
uterus or analog | 2.35e-08 | 1 |
subdivision of digestive tract | 2.38e-08 | 118 |
vermiform appendix | 4.11e-08 | 1 |
caecum | 4.11e-08 | 1 |
midgut | 4.11e-08 | 1 |
vagina | 5.05e-08 | 1 |
cranial nerve II | 6.63e-08 | 1 |
cranial nerve | 6.63e-08 | 1 |
nerve trunk | 6.63e-08 | 1 |
nerve connecting eye with brain | 6.63e-08 | 1 |
nerve | 6.63e-08 | 1 |
retinal neural layer | 6.63e-08 | 1 |
presumptive neural retina | 6.63e-08 | 1 |
vas deferens | 9.29e-08 | 1 |
spermatic cord | 9.29e-08 | 1 |
digestive system | 2.06e-07 | 145 |
digestive tract | 2.06e-07 | 145 |
primitive gut | 2.06e-07 | 145 |