FFCP PHASE1:Hg19::chr19:49362641..49362662,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:49362641..49362662,-
|short_description=p4@PLEKHA4
|description=CAGE_peak_4_at_PLEKHA4_5end
|association_with_transcript=-28bp_to_uc002pkw.1_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57664 | |EntrezGene=57664 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14339 | |HGNC=14339 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-28bp_to_uc002pkw.1_5end | |||
|cluster_id=chr19:49362641..49362662,- | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_4_at_PLEKHA4_5end | |||
|id=chr19:49362641..49362662,- | |||
|ontology_enrichment_celltype=CL:0000037!2.05e-18!172;CL:0000566!2.05e-18!172;CL:0002032!3.32e-17!165;CL:0000837!3.32e-17!165;CL:0000738!7.47e-17!140;CL:0000988!1.78e-16!182;CL:0002031!4.42e-16!124;CL:0002087!5.17e-15!119;CL:0000838!4.76e-14!52;CL:0000542!1.47e-13!53;CL:0000051!1.47e-13!53;CL:0000084!4.31e-10!25;CL:0000827!4.31e-10!25;CL:0000039!4.52e-09!7;CL:0000586!4.52e-09!7;CL:0000791!6.17e-09!18;CL:0000789!6.17e-09!18;CL:0002420!6.17e-09!18;CL:0002419!6.17e-09!18;CL:0000790!6.17e-09!18;CL:0000625!1.66e-08!11;CL:0002322!7.94e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;8.67e-28;7!CL:0000586;8.67e-28;7!CL:0002322;1.50e-19;5!CL:0000084;1.72e-08;25!CL:0000791;4.07e-07;18!CL:0000789;4.07e-07;18!CL:0002419;4.07e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.84e-28,7;CL:0000586,5.84e-28,7;CL:0002322,4.45e-20,5;CL:0000838,4.85e-11,52;CL:0000542,8.94e-11,53;CL:0000051,8.94e-11,53;CL:0000084,2.21e-08,25;CL:0000827,2.21e-08,25;CL:0002032,1.02e-07,161;CL:0000837,1.02e-07,161;CL:0000037,3.49e-07,168;CL:0000791,3.88e-07,18;CL:0000789,3.88e-07,18;CL:0002420,3.88e-07,18;CL:0002419,3.88e-07,18;CL:0000790,3.88e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;4.07e-07;18!UBERON:0009117;5.83e-07;10!UBERON:0005564;5.83e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;1.61e-12;8!DOID:3095;4.03e-08;22!DOID:2994;4.03e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.43e-12,8;DOID:3095,3.60e-08,22;DOID:2994,3.60e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.76e-08!102;UBERON:0003061!7.76e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.03e-08;8!UBERON:0002370;2.13e-08;2!UBERON:0005058;2.13e-08;2!UBERON:0009113;2.13e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.09e-09,4;UBERON:0005058,3.09e-09,4;UBERON:0009113,3.09e-09,4;UBERON:0003295,3.09e-09,4;UBERON:0005562,3.09e-09,4;UBERON:0000473,1.03e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.09340350391728,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.251085279189606,0.305653622991805,0.492603536699674,0.865818594450472,0,0.383829398097213,0.464448369948228,0,0.6024118375565,0.369754010166788,0,0,0.587200878669695,0.553995408531877,0.200544447470142,0.217010870715852,0,0.32389366601898,1.03030227053675,0.290796477559129,0.377875943688809,0.242584061187816,0.464858073811369,0,0,0,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0,0.449446968890169,0,0.320929027076094,0,0.329851300186716,0.398927315243264,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0.736555271975129,0,0,0,0,0,0.150176892841506,0.32145117339416,0,0,0.182664153764634,0,0,0,2.13365111283254,1.20118796110804,1.72425731986345,0.661044872784862,0,0,0.587237189370939,0.382273228125229,0,1.12101712596307,0.790152254325231,0.196709770113833,1.17903228824749,0,0.668745981562712,1.62961133316795,2.36723902867367,0,0.891283655081389,0,0.221533894583621,0.270803863765016,0.896639238079726,0.520237390239513,0.493313713811028,0.829050053357545,0.289803085735052,0.889719378972363,0.267540828089713,0,0.906474741580529,0,0.34362744548263,0.253019692019503,1.59282707162048,0.651083453856419,0.950452044448374,1.20460095262218,0.895906278080929,3.74792179657038,0.473554504088034,0,0.604820229674197,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.327447688744282,0.364295288292542,0.370784442784429,0,0.522389211897802,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5614478287215,2.12047629314376,2.32387885739037,1.65857688024593,1.7662459561294,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0.185176890317059,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0.704387472105808,0.829312462163088,0.864719720501769,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,2.01753259188349,0.394061520403854,1.07813787429759,0.77005821767849,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.431428401637234,0.74709290462411,1.21251028578504,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.657779629937804,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.376575203107117,0,0,0,0,1.01489521846434,1.52927441428475,0.569647187174163,0.238231775457789,0,0,1.62009431171434,0,0,0,0,0,0.144269212976445,0,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0,0.321176150207399,0.403599414382095,1.27753871307098,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0.111443384277478,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0.120596438625408,0,0.442317039724898,0.591095237907095,0.438770794307945,0,0,0,0,2.3056390438806,1.79515288819544,1.19512109114209,0.31900115973192,0.641183153813036,0.533034776018635,1.02193298195737,0,0,3.15833924864053,2.35275041181287,4.02771808742022,2.08729105996604,0.953619473882272,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,0.126621591911757,0,0.961905843018405,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,1.05154941711726,0.558564802544508,0.229160424011684,0,0.199679000498991,0,0,0.470284307407084,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0,1.5476039091159,0.0607495566580247,0,0.0788057072991982,0.209818352539992,0.844802692155252,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,1.32506888912221,0.129282956361551,0.39669780522807,0,0,1.06787412567695,0.314408610199332,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.194860308839388,0.664324201566815,1.30852315404675,0,0,0,0.19998739585493,0,1.03328987796489,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0,0,0.345786262321089,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,1.56302802246618,3.14288033377707,0,0,0,0,0.206686796501184,0.126831620387814,0,0.548257766857182,0,0,0,0,0,0,0.682986574053893,0.443511850813194,2.7656157013387,0,0,0.263091094251396,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,2.11347980993343,0.077174158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| ||
|short_description=p4@PLEKHA4 | |||
}} | }} |
Latest revision as of 04:19, 19 September 2015
Short description: | p4@PLEKHA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PLEKHA4_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -28bp_to_uc002pkw.1_5end |
EntrezGene: | PLEKHA4 |
HGNC: | 14339 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.84e-28 | 7 |
germ cell | 5.84e-28 | 7 |
embryonic stem cell | 4.45e-20 | 5 |
lymphoid lineage restricted progenitor cell | 4.85e-11 | 52 |
lymphocyte | 8.94e-11 | 53 |
common lymphoid progenitor | 8.94e-11 | 53 |
T cell | 2.21e-08 | 25 |
pro-T cell | 2.21e-08 | 25 |
hematopoietic oligopotent progenitor cell | 1.02e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-07 | 161 |
hematopoietic stem cell | 3.49e-07 | 168 |
mature alpha-beta T cell | 3.88e-07 | 18 |
alpha-beta T cell | 3.88e-07 | 18 |
immature T cell | 3.88e-07 | 18 |
mature T cell | 3.88e-07 | 18 |
immature alpha-beta T cell | 3.88e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.09e-09 | 4 |
hemolymphoid system gland | 3.09e-09 | 4 |
thymic region | 3.09e-09 | 4 |
pharyngeal gland | 3.09e-09 | 4 |
thymus primordium | 3.09e-09 | 4 |
testis | 1.03e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.43e-12 | 8 |
germ cell and embryonal cancer | 3.60e-08 | 22 |
germ cell cancer | 3.60e-08 | 22 |