FFCP PHASE1:Hg19::chr19:49376066..49376081,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:49376066..49376081,+
|short_description=p20@PPP1R15A
|description=CAGE_peak_20_at_PPP1R15A_5end
|association_with_transcript=-407bp_to_DQ891855,EU176641_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23645 | |EntrezGene=23645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=14375 | |HGNC=14375 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-407bp_to_DQ891855,EU176641_5end | |||
|cluster_id=chr19:49376066..49376081,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_20_at_PPP1R15A_5end | |||
|id=chr19:49376066..49376081,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.96e-36!42;CL:0000860!9.44e-33!45;CL:0000738!1.17e-32!140;CL:0000037!1.17e-28!172;CL:0000566!1.17e-28!172;CL:0000766!2.58e-28!76;CL:0000557!4.78e-26!71;CL:0000988!7.24e-26!182;CL:0002032!2.17e-25!165;CL:0000837!2.17e-25!165;CL:0002031!1.06e-24!124;CL:0002087!1.67e-23!119;CL:0000839!2.62e-23!70;CL:0002009!4.37e-23!65;CL:0000763!5.49e-23!112;CL:0000049!5.49e-23!112;CL:0002194!6.46e-21!63;CL:0000576!6.46e-21!63;CL:0000040!6.46e-21!63;CL:0000559!6.46e-21!63;CL:0000134!4.17e-15!358;CL:0002320!2.53e-14!365;CL:0000219!1.30e-12!390;CL:0000048!5.88e-10!430;CL:0000723!6.64e-10!436;CL:0000034!2.79e-09!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.06e-68;33!CL:0002057;1.06e-68;33!CL:0000473;8.84e-48;39!CL:0000234;8.84e-48;39!CL:0000576;1.12e-34;48!CL:0000766;4.23e-25;69!CL:0000763;5.77e-15;100!CL:0000094;5.31e-13;8!CL:0002087;1.20e-10;104!CL:0000081;1.70e-09;11!CL:0000767;2.40e-09;3!CL:0000738;1.41e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.10e-64,42;CL:0002057,1.10e-64,42;CL:0000766,3.11e-60,72;CL:0000473,4.35e-56,48;CL:0000234,4.35e-56,48;CL:0000557,7.22e-51,67;CL:0000839,3.09e-47,66;CL:0002009,7.06e-47,61;CL:0002194,4.77e-44,59;CL:0000576,4.77e-44,59;CL:0000040,4.77e-44,59;CL:0000559,4.77e-44,59;CL:0000763,5.46e-42,108;CL:0000049,5.46e-42,108;CL:0000738,5.38e-35,136;CL:0002031,4.72e-29,120;CL:0002032,7.98e-29,161;CL:0000837,7.98e-29,161;CL:0000037,2.01e-27,168;CL:0000988,8.82e-26,177;CL:0002087,5.66e-23,115;CL:0000094,5.66e-13,8;CL:0000134,2.46e-10,354;CL:0002320,4.94e-10,361;CL:0000081,1.78e-09,11;CL:0000767,2.85e-09,3;CL:0000219,5.79e-09,386;CL:0000048,1.18e-07,427;CL:0000723,1.80e-07,433;CL:0000034,3.08e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.70e-47;42!CL:0000049;6.86e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.69e-23!80;UBERON:0002390!9.39e-23!102;UBERON:0003061!9.39e-23!102;UBERON:0001474!8.57e-22!86;UBERON:0002193!1.90e-21!112;UBERON:0002405!3.00e-19!115;UBERON:0004765!1.34e-16!101;UBERON:0001434!1.34e-16!101;UBERON:0002384!7.91e-14!375;UBERON:0003081!2.36e-08!216;UBERON:0002204!3.98e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.15e-44,76;UBERON:0001474,7.40e-41,82;UBERON:0004765,7.27e-37,90;UBERON:0002405,1.53e-35,93;UBERON:0002390,1.62e-33,98;UBERON:0003061,1.62e-33,98;UBERON:0001434,9.22e-33,100;UBERON:0002193,5.09e-30,108;UBERON:0002204,7.59e-18,167;UBERON:0003081,7.21e-14,203;UBERON:0002384,1.28e-09,371;UBERON:0000926,2.81e-07,315;UBERON:0004120,2.81e-07,315;UBERON:0006603,2.81e-07,315 | |||
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| ||
|short_description=p20@PPP1R15A | |||
}} | }} |
Latest revision as of 04:21, 19 September 2015
Short description: | p20@PPP1R15A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_PPP1R15A_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -407bp_to_DQ891855, EU176641_5end |
EntrezGene: | PPP1R15A |
HGNC: | 14375 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.10e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.10e-64 | 42 |
myeloid leukocyte | 3.11e-60 | 72 |
defensive cell | 4.35e-56 | 48 |
phagocyte | 4.35e-56 | 48 |
granulocyte monocyte progenitor cell | 7.22e-51 | 67 |
myeloid lineage restricted progenitor cell | 3.09e-47 | 66 |
macrophage dendritic cell progenitor | 7.06e-47 | 61 |
monopoietic cell | 4.77e-44 | 59 |
monocyte | 4.77e-44 | 59 |
monoblast | 4.77e-44 | 59 |
promonocyte | 4.77e-44 | 59 |
myeloid cell | 5.46e-42 | 108 |
common myeloid progenitor | 5.46e-42 | 108 |
leukocyte | 5.38e-35 | 136 |
hematopoietic lineage restricted progenitor cell | 4.72e-29 | 120 |
hematopoietic oligopotent progenitor cell | 7.98e-29 | 161 |
hematopoietic multipotent progenitor cell | 7.98e-29 | 161 |
hematopoietic stem cell | 2.01e-27 | 168 |
hematopoietic cell | 8.82e-26 | 177 |
nongranular leukocyte | 5.66e-23 | 115 |
granulocyte | 5.66e-13 | 8 |
mesenchymal cell | 2.46e-10 | 354 |
connective tissue cell | 4.94e-10 | 361 |
blood cell | 1.78e-09 | 11 |
basophil | 2.85e-09 | 3 |
motile cell | 5.79e-09 | 386 |
multi fate stem cell | 1.18e-07 | 427 |
somatic stem cell | 1.80e-07 | 433 |
stem cell | 3.08e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.15e-44 | 76 |
bone element | 7.40e-41 | 82 |
skeletal element | 7.27e-37 | 90 |
immune system | 1.53e-35 | 93 |
hematopoietic system | 1.62e-33 | 98 |
blood island | 1.62e-33 | 98 |
skeletal system | 9.22e-33 | 100 |
hemolymphoid system | 5.09e-30 | 108 |
musculoskeletal system | 7.59e-18 | 167 |
lateral plate mesoderm | 7.21e-14 | 203 |
connective tissue | 1.28e-09 | 371 |
mesoderm | 2.81e-07 | 315 |
mesoderm-derived structure | 2.81e-07 | 315 |
presumptive mesoderm | 2.81e-07 | 315 |