FF:10204-103F6: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023 | |DRA_sample_Accession=CAGE@SAMD00005937 | ||
|accession_numbers=CAGE;DRX008758;DRR009630;DRZ001055;DRZ002440;DRZ012405;DRZ013790 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000996,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0004119,UBERON:0000062,UBERON:0004120,UBERON:0000077,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0003975,UBERON:0004175,UBERON:0010317,UBERON:0003100,UBERON:0000474 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010204 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!1.97!92.54!TCF21;;chr19:46801639..46801699,+!p1@HIF3A!1.90!77.89!HIF3A;;chr11:113930425..113930471,+!p1@ZBTB16!1.83!94.54!ZBTB16;;chr6:1312325..1312340,+!p1@FOXQ1!1.81!101.20!FOXQ1;;chr20:62680984..62680999,-!p1@SOX18!1.77!76.56!SOX18;;chr7:44143925..44143970,+!p1@AEBP1!1.76!1173.73!AEBP1;;chr16:86544113..86544145,+!p1@FOXF1!1.75!67.24!FOXF1;;chr15:42749722..42749739,-!p2@ZFP106!1.68!81.89!ZFP106;;chr11:34642612..34642646,+!p1@EHF!1.67!45.27!EHF;;chr7:44143978..44143989,+!p2@AEBP1!1.64!75.90!AEBP1;;chr7:35293685..35293718,-!p1@TBX20!1.61!39.28!TBX20;;chr3:126076242..126076257,-!p1@KLF15!1.59!46.60!KLF15;;chr1:201979743..201979762,+!p1@ELF3!1.59!37.95!ELF3;;chr11:113930401..113930422,+!p3@ZBTB16!1.58!37.28!ZBTB16;;chr21:39870339..39870443,-!p1@ERG!1.54!33.95!ERG;;chr22:38380543..38380569,-!p1@SOX10!1.53!32.62!SOX10;;chr1:201979703..201979721,+!p2@ELF3!1.52!31.96!ELF3;;chr5:134369879..134369898,-!p2@PITX1!1.49!29.96!PITX1;;chr7:27192185..27192209,-!p1@HOXA3!1.49!29.96!HOXA3;;chr7:44143997..44144008,+!p3@AEBP1!1.48!37.28!AEBP1;;chr12:52445218..52445237,+!p1@NR4A1!1.44!319.56!NR4A1;;chr12:52437488..52437507,+!p2@NR4A1!1.44!26.63!NR4A1;;chr10:8096631..8096660,+!p1@GATA3!1.43!31.29!GATA3;;chr3:169381420..169381535,-!p1@MECOM!1.43!29.96!MECOM;;chr17:6926362..6926377,+!p1@BCL6B!1.43!25.96!BCL6B;;chr1:40105299..40105326,-!p1@HEYL!1.42!25.30!HEYL;;chr11:47400078..47400106,-!p1@SPI1!1.41!24.63!SPI1;;chr11:113930291..113930339,+!p2@ZBTB16!1.40!38.61!ZBTB16;;chr20:51588873..51588953,+!p1@TSHZ2!1.39!30.62!TSHZ2;;chr13:72441315..72441454,-!p1@DACH1!1.37!43.94!DACH1;;chr4:174451370..174451387,-!p1@HAND2!1.37!22.64!HAND2;;chr5:71803177..71803255,-!p1@ZNF366!1.37!22.64!ZNF366;;chr8:10588010..10588030,-!p1@SOX7!1.37!22.64!SOX7;;chr9:77112244..77112262,+!p1@RORB!1.35!23.97!RORB;;chr7:44143738..44143760,+!p4@AEBP1!1.33!23.30!AEBP1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.31!19.31!ZBED1;;chr3:128212033..128212051,-!p1@GATA2!1.29!18.64!GATA2;;chr10:131762504..131762555,-!p1@EBF3!1.28!17.98!EBF3;;chr17:46682321..46682362,-!p1@HOXB6!1.26!17.31!HOXB6;;chr2:19558373..19558392,-!p1@OSR1!1.25!45.94!OSR1;;chr1:61548069..61548102,+!p3@NFIA!1.25!40.61!NFIA;;chr7:15726243..15726293,-!p2@MEOX2!1.25!16.64!MEOX2;;chr7:113726357..113726443,+!p1@FOXP2!1.24!27.96!FOXP2;;chr1:209979467..209979494,-!p1@IRF6!1.23!17.98!IRF6;;chr4:174450089..174450153,-!p2@HAND2!1.23!15.98!HAND2;;chrX:106960285..106960299,-!p1@TSC22D3!1.22!411.44!TSC22D3;;chr7:63505799..63505904,+!p1@ZNF727!1.21!15.31!ZNF727;;chr8:48650715..48650735,-!p1@CEBPD!1.20!1832.16!CEBPD;;chr3:126076264..126076305,-!p2@KLF15!1.20!20.64!KLF15;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.19!14.65!PEG3;;chr2:177001290..177001315,+!p1@HOXD3!1.18!13.98!HOXD3;;chr6:85474299..85474324,-!p1@TBX18!1.17!24.63!TBX18;;chr14:38064429..38064486,-!p1@FOXA1!1.16!13.32!FOXA1;;chr12:26277956..26277980,-!p1@BHLHE41!1.15!46.60!BHLHE41;;chr5:134369905..134369972,-!p1@PITX1!1.15!19.97!PITX1;;chr8:106330656..106330684,+!p1@ZFPM2!1.14!33.29!ZFPM2;;chr1:214161272..214161322,+!p1@PROX1!1.14!17.98!PROX1;;chr12:115122318..115122331,-!p2@TBX3!1.14!12.65!TBX3;;chr7:15726296..15726315,-!p1@MEOX2!1.14!12.65!MEOX2;;chr1:61548225..61548299,+!p1@NFIA!1.13!161.11!NFIA;;chrX:66763856..66763896,+!p1@AR!1.13!17.98!AR;;chr3:12330560..12330579,+!p1@PPARG!1.12!13.98!PPARG;;chr9:114287433..114287513,+!p1@ZNF483!1.11!31.29!ZNF483;;chr11:34642656..34642667,+!p2@EHF!1.11!11.98!EHF;;chr15:96873984..96873999,+!p3@NR2F2!1.10!84.55!NR2F2;;chr17:7492684..7492778,-!p2@SOX15!1.10!24.63!SOX15;;chr20:2673383..2673441,+!p1@EBF4!1.10!18.64!EBF4;;chr11:12696579..12696611,+!p4@TEAD1!1.09!11.32!TEAD1;;chr5:122424918..122424944,+!p1@PRDM6!1.09!11.32!PRDM6;;chr12:115122005..115122016,-!p3@TBX3!1.08!13.32!TBX3;;chr1:61548374..61548415,+!p4@NFIA!1.07!19.97!NFIA;;chr12:115121802..115121814,-!p5@TBX3!1.07!10.65!TBX3;;chr2:176994408..176994492,+!p1@HOXD8!1.07!10.65!HOXD8;;chr9:94186101..94186122,-!p1@NFIL3!1.06!146.47!NFIL3;;chr1:61547894..61547968,+!p2@NFIA!1.06!30.62!NFIA;;chr3:24536253..24536328,-!p1@THRB!1.06!19.97!THRB;;chr12:80085061..80085119,-!p6@PAWR!1.06!16.64!PAWR;;chr2:85980919..85980942,+!p4@ATOH8!1.06!11.32!ATOH8;;chr4:4861385..4861398,+!p1@MSX1!1.05!30.62!MSX1;;chr17:59477197..59477212,+!p2@TBX2!1.05!17.98!TBX2;;chrX:107019163..107019179,-!p7@TSC22D3!1.05!11.98!TSC22D3;;chr2:145275162..145275202,-!p2@ZEB2!1.04!59.92!ZEB2;;chr18:19749541..19749557,+!p1@GATA6!1.04!31.96!GATA6;;chrX:107018969..107019024,-!p6@TSC22D3!1.04!13.98!TSC22D3;;chr18:53068911..53068935,-!p4@TCF4!1.04!11.32!TCF4;;chr3:21792682..21792720,-!p1@ZNF385D!1.04!9.99!ZNF385D;;chr9:124991204..124991246,-!p1@LHX6!1.04!9.99!LHX6;;chr2:145277882..145277967,-!p3@ZEB2!1.02!16.64!ZEB2;;chr12:54785074..54785122,-!p2@ZNF385A!1.02!14.65!ZNF385A;;chr2:85980951..85981004,+!p1@ATOH8!1.01!15.31!ATOH8;;chr8:106330696..106330719,+!p2@ZFPM2!1.01!11.98!ZFPM2;;chr17:53342311..53342400,+!p1@HLF!1.01!10.65!HLF;;chr17:46690839..466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| |expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!1.97!92.54!TCF21;;chr19:46801639..46801699,+!p1@HIF3A!1.90!77.89!HIF3A;;chr11:113930425..113930471,+!p1@ZBTB16!1.83!94.54!ZBTB16;;chr6:1312325..1312340,+!p1@FOXQ1!1.81!101.20!FOXQ1;;chr20:62680984..62680999,-!p1@SOX18!1.77!76.56!SOX18;;chr7:44143925..44143970,+!p1@AEBP1!1.76!1173.73!AEBP1;;chr16:86544113..86544145,+!p1@FOXF1!1.75!67.24!FOXF1;;chr15:42749722..42749739,-!p2@ZFP106!1.68!81.89!ZFP106;;chr11:34642612..34642646,+!p1@EHF!1.67!45.27!EHF;;chr7:44143978..44143989,+!p2@AEBP1!1.64!75.90!AEBP1;;chr7:35293685..35293718,-!p1@TBX20!1.61!39.28!TBX20;;chr3:126076242..126076257,-!p1@KLF15!1.59!46.60!KLF15;;chr1:201979743..201979762,+!p1@ELF3!1.59!37.95!ELF3;;chr11:113930401..113930422,+!p3@ZBTB16!1.58!37.28!ZBTB16;;chr21:39870339..39870443,-!p1@ERG!1.54!33.95!ERG;;chr22:38380543..38380569,-!p1@SOX10!1.53!32.62!SOX10;;chr1:201979703..201979721,+!p2@ELF3!1.52!31.96!ELF3;;chr5:134369879..134369898,-!p2@PITX1!1.49!29.96!PITX1;;chr7:27192185..27192209,-!p1@HOXA3!1.49!29.96!HOXA3;;chr7:44143997..44144008,+!p3@AEBP1!1.48!37.28!AEBP1;;chr12:52445218..52445237,+!p1@NR4A1!1.44!319.56!NR4A1;;chr12:52437488..52437507,+!p2@NR4A1!1.44!26.63!NR4A1;;chr10:8096631..8096660,+!p1@GATA3!1.43!31.29!GATA3;;chr3:169381420..169381535,-!p1@MECOM!1.43!29.96!MECOM;;chr17:6926362..6926377,+!p1@BCL6B!1.43!25.96!BCL6B;;chr1:40105299..40105326,-!p1@HEYL!1.42!25.30!HEYL;;chr11:47400078..47400106,-!p1@SPI1!1.41!24.63!SPI1;;chr11:113930291..113930339,+!p2@ZBTB16!1.40!38.61!ZBTB16;;chr20:51588873..51588953,+!p1@TSHZ2!1.39!30.62!TSHZ2;;chr13:72441315..72441454,-!p1@DACH1!1.37!43.94!DACH1;;chr4:174451370..174451387,-!p1@HAND2!1.37!22.64!HAND2;;chr5:71803177..71803255,-!p1@ZNF366!1.37!22.64!ZNF366;;chr8:10588010..10588030,-!p1@SOX7!1.37!22.64!SOX7;;chr9:77112244..77112262,+!p1@RORB!1.35!23.97!RORB;;chr7:44143738..44143760,+!p4@AEBP1!1.33!23.30!AEBP1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.31!19.31!ZBED1;;chr3:128212033..128212051,-!p1@GATA2!1.29!18.64!GATA2;;chr10:131762504..131762555,-!p1@EBF3!1.28!17.98!EBF3;;chr17:46682321..46682362,-!p1@HOXB6!1.26!17.31!HOXB6;;chr2:19558373..19558392,-!p1@OSR1!1.25!45.94!OSR1;;chr1:61548069..61548102,+!p3@NFIA!1.25!40.61!NFIA;;chr7:15726243..15726293,-!p2@MEOX2!1.25!16.64!MEOX2;;chr7:113726357..113726443,+!p1@FOXP2!1.24!27.96!FOXP2;;chr1:209979467..209979494,-!p1@IRF6!1.23!17.98!IRF6;;chr4:174450089..174450153,-!p2@HAND2!1.23!15.98!HAND2;;chrX:106960285..106960299,-!p1@TSC22D3!1.22!411.44!TSC22D3;;chr7:63505799..63505904,+!p1@ZNF727!1.21!15.31!ZNF727;;chr8:48650715..48650735,-!p1@CEBPD!1.20!1832.16!CEBPD;;chr3:126076264..126076305,-!p2@KLF15!1.20!20.64!KLF15;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.19!14.65!PEG3;;chr2:177001290..177001315,+!p1@HOXD3!1.18!13.98!HOXD3;;chr6:85474299..85474324,-!p1@TBX18!1.17!24.63!TBX18;;chr14:38064429..38064486,-!p1@FOXA1!1.16!13.32!FOXA1;;chr12:26277956..26277980,-!p1@BHLHE41!1.15!46.60!BHLHE41;;chr5:134369905..134369972,-!p1@PITX1!1.15!19.97!PITX1;;chr8:106330656..106330684,+!p1@ZFPM2!1.14!33.29!ZFPM2;;chr1:214161272..214161322,+!p1@PROX1!1.14!17.98!PROX1;;chr12:115122318..115122331,-!p2@TBX3!1.14!12.65!TBX3;;chr7:15726296..15726315,-!p1@MEOX2!1.14!12.65!MEOX2;;chr1:61548225..61548299,+!p1@NFIA!1.13!161.11!NFIA;;chrX:66763856..66763896,+!p1@AR!1.13!17.98!AR;;chr3:12330560..12330579,+!p1@PPARG!1.12!13.98!PPARG;;chr9:114287433..114287513,+!p1@ZNF483!1.11!31.29!ZNF483;;chr11:34642656..34642667,+!p2@EHF!1.11!11.98!EHF;;chr15:96873984..96873999,+!p3@NR2F2!1.10!84.55!NR2F2;;chr17:7492684..7492778,-!p2@SOX15!1.10!24.63!SOX15;;chr20:2673383..2673441,+!p1@EBF4!1.10!18.64!EBF4;;chr11:12696579..12696611,+!p4@TEAD1!1.09!11.32!TEAD1;;chr5:122424918..122424944,+!p1@PRDM6!1.09!11.32!PRDM6;;chr12:115122005..115122016,-!p3@TBX3!1.08!13.32!TBX3;;chr1:61548374..61548415,+!p4@NFIA!1.07!19.97!NFIA;;chr12:115121802..115121814,-!p5@TBX3!1.07!10.65!TBX3;;chr2:176994408..176994492,+!p1@HOXD8!1.07!10.65!HOXD8;;chr9:94186101..94186122,-!p1@NFIL3!1.06!146.47!NFIL3;;chr1:61547894..61547968,+!p2@NFIA!1.06!30.62!NFIA;;chr3:24536253..24536328,-!p1@THRB!1.06!19.97!THRB;;chr12:80085061..80085119,-!p6@PAWR!1.06!16.64!PAWR;;chr2:85980919..85980942,+!p4@ATOH8!1.06!11.32!ATOH8;;chr4:4861385..4861398,+!p1@MSX1!1.05!30.62!MSX1;;chr17:59477197..59477212,+!p2@TBX2!1.05!17.98!TBX2;;chrX:107019163..107019179,-!p7@TSC22D3!1.05!11.98!TSC22D3;;chr2:145275162..145275202,-!p2@ZEB2!1.04!59.92!ZEB2;;chr18:19749541..19749557,+!p1@GATA6!1.04!31.96!GATA6;;chrX:107018969..107019024,-!p6@TSC22D3!1.04!13.98!TSC22D3;;chr18:53068911..53068935,-!p4@TCF4!1.04!11.32!TCF4;;chr3:21792682..21792720,-!p1@ZNF385D!1.04!9.99!ZNF385D;;chr9:124991204..124991246,-!p1@LHX6!1.04!9.99!LHX6;;chr2:145277882..145277967,-!p3@ZEB2!1.02!16.64!ZEB2;;chr12:54785074..54785122,-!p2@ZNF385A!1.02!14.65!ZNF385A;;chr2:85980951..85981004,+!p1@ATOH8!1.01!15.31!ATOH8;;chr8:106330696..106330719,+!p2@ZFPM2!1.01!11.98!ZFPM2;;chr17:53342311..53342400,+!p1@HLF!1.01!10.65!HLF;;chr17:46690839..466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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000161;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000990;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001353;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003134;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003975;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004122 | |||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006595,UBERON:0006603,UBERON:0010316 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/vagina%252c%2520adult.CNhs12854.10204-103F6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/vagina%252c%2520adult.CNhs12854.10204-103F6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/vagina%252c%2520adult.CNhs12854.10204-103F6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/vagina%252c%2520adult.CNhs12854.10204-103F6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/vagina%252c%2520adult.CNhs12854.10204-103F6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10204-103F6 | |id=FF:10204-103F6 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010204 | ||
|is_obsolete= | |||
|library_id=CNhs12854 | |||
|library_id_phase_based=2:CNhs12854 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10204 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10204 | |||
|name=vagina, adult | |name=vagina, adult | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12854,LSID973,release012,COMPLETED | |profile_hcage=CNhs12854,LSID973,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0,0.402085467325314,0.250663187023505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0682885777543791,0,0,0,0,0,0.123653691834749,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0.618977588991233,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0.133925897526589,0,0.124619226860202,0,0,0.12426796088971,0,0,0,0,0,0,0,0,0.221611588102807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139113569432022,0.403607444752202,0.110805794051404,0,0.129720739092195,0.342761498705405,0.0707226629593665,0.110805794051404,0,0,0,0.1235762368651,0.210770575063061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,0.399287081551768,0.822086217089415,0,0,0,0,0,0 | |||
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| |||
|rna_box=103 | |rna_box=103 | ||
|rna_catalog_number=R1234283-10 | |rna_catalog_number=R1234283-10 | ||
| Line 56: | Line 78: | ||
|rna_tube_id=103F6 | |rna_tube_id=103F6 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age=68 | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.78377383831609e-219!GO:0005737;cytoplasm;1.62160837786174e-149!GO:0043226;organelle;7.46985151139139e-140!GO:0043229;intracellular organelle;1.47314547156162e-139!GO:0043231;intracellular membrane-bound organelle;2.92630304800889e-132!GO:0043227;membrane-bound organelle;2.92630304800889e-132!GO:0005515;protein binding;2.20408748800918e-105!GO:0044444;cytoplasmic part;1.80825532298939e-85!GO:0044422;organelle part;2.59069124366008e-64!GO:0044446;intracellular organelle part;3.05014638382236e-63!GO:0043170;macromolecule metabolic process;8.8137752352795e-62!GO:0005634;nucleus;2.41521726258088e-61!GO:0044238;primary metabolic process;2.77689705392301e-61!GO:0044237;cellular metabolic process;1.66965592273678e-59!GO:0032991;macromolecular complex;8.53989421074738e-52!GO:0003723;RNA binding;3.23862973467282e-46!GO:0030529;ribonucleoprotein complex;3.5054198970793e-46!GO:0044428;nuclear part;7.8434788348964e-43!GO:0043233;organelle lumen;3.72254858019733e-41!GO:0031974;membrane-enclosed lumen;3.72254858019733e-41!GO:0010467;gene expression;5.33408374294395e-41!GO:0016043;cellular component organization and biogenesis;1.05945112012307e-40!GO:0019538;protein metabolic process;9.68229913857755e-39!GO:0043283;biopolymer metabolic process;2.04429240602771e-37!GO:0033036;macromolecule localization;9.33777673610721e-34!GO:0015031;protein transport;2.65204546042039e-33!GO:0044260;cellular macromolecule metabolic process;2.93904207510744e-33!GO:0005829;cytosol;2.24720262367528e-32!GO:0044267;cellular protein metabolic process;2.50927666525013e-32!GO:0045184;establishment of protein localization;2.48590612774972e-31!GO:0008104;protein localization;6.02625680242403e-31!GO:0031090;organelle membrane;8.87793638169919e-29!GO:0016071;mRNA metabolic process;3.92219674342594e-28!GO:0031981;nuclear lumen;5.62391152937375e-28!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.13851867694232e-28!GO:0005739;mitochondrion;2.20571331839449e-27!GO:0006412;translation;2.34009325478291e-27!GO:0006396;RNA processing;2.54205341845338e-26!GO:0046907;intracellular transport;2.7767487034138e-26!GO:0005840;ribosome;1.07966663454051e-25!GO:0043234;protein complex;2.41995764456091e-25!GO:0008380;RNA splicing;2.58251669863321e-25!GO:0050794;regulation of cellular process;6.2649722172681e-24!GO:0016070;RNA metabolic process;9.70241799156837e-24!GO:0008134;transcription factor binding;1.9154581348369e-23!GO:0006397;mRNA processing;6.65682728297368e-23!GO:0031967;organelle envelope;1.2810206694288e-22!GO:0031975;envelope;1.72404338515104e-22!GO:0006886;intracellular protein transport;1.87223542683883e-22!GO:0003735;structural constituent of ribosome;6.89472626609781e-22!GO:0050789;regulation of biological process;2.52250154347077e-21!GO:0033279;ribosomal subunit;1.89812224674117e-20!GO:0065003;macromolecular complex assembly;2.10886944459945e-20!GO:0003676;nucleic acid binding;6.4217304379925e-20!GO:0044429;mitochondrial part;4.43451279418512e-19!GO:0022607;cellular component assembly;2.05607918852896e-18!GO:0009059;macromolecule biosynthetic process;4.93955975767232e-18!GO:0005654;nucleoplasm;5.4658655732408e-18!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.26849593455036e-18!GO:0048523;negative regulation of cellular process;1.0771179434927e-17!GO:0044249;cellular biosynthetic process;1.98656052493403e-17!GO:0044445;cytosolic part;2.03962573251801e-17!GO:0005681;spliceosome;3.34545449689073e-17!GO:0048770;pigment granule;8.1680269192185e-17!GO:0042470;melanosome;8.1680269192185e-17!GO:0051641;cellular localization;1.99139024087415e-16!GO:0051649;establishment of cellular localization;2.35434186419325e-16!GO:0044451;nucleoplasm part;2.43252251114072e-16!GO:0048519;negative regulation of biological process;8.30352246643007e-16!GO:0065007;biological regulation;8.93871951632405e-16!GO:0009058;biosynthetic process;1.59311016610095e-15!GO:0000166;nucleotide binding;2.27854462890014e-15!GO:0006457;protein folding;3.58265138032804e-15!GO:0006366;transcription from RNA polymerase II promoter;4.19983210853224e-15!GO:0006996;organelle organization and biogenesis;5.68985268537318e-15!GO:0016192;vesicle-mediated transport;5.97966089447856e-15!GO:0022613;ribonucleoprotein complex biogenesis and assembly;9.41336821121876e-15!GO:0003712;transcription cofactor activity;1.10338491525095e-14!GO:0005794;Golgi apparatus;3.12936996819008e-14!GO:0005740;mitochondrial envelope;3.40862397096551e-14!GO:0043228;non-membrane-bound organelle;5.62666318634193e-14!GO:0043232;intracellular non-membrane-bound organelle;5.62666318634193e-14!GO:0031966;mitochondrial membrane;1.48435620941386e-13!GO:0006512;ubiquitin cycle;2.15129241322583e-13!GO:0012505;endomembrane system;2.17034989874043e-13!GO:0016564;transcription repressor activity;2.3179764246365e-13!GO:0022618;protein-RNA complex assembly;2.79174140266958e-13!GO:0006119;oxidative phosphorylation;3.12277051040999e-13!GO:0019222;regulation of metabolic process;3.85536031242877e-13!GO:0043687;post-translational protein modification;6.40847138956688e-13!GO:0019866;organelle inner membrane;8.95253863637893e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;1.70946097804974e-12!GO:0043412;biopolymer modification;1.99542226492895e-12!GO:0012501;programmed cell death;2.81815695040115e-12!GO:0006511;ubiquitin-dependent protein catabolic process;3.06065641742502e-12!GO:0019941;modification-dependent protein catabolic process;3.13059616797912e-12!GO:0043632;modification-dependent macromolecule catabolic process;3.13059616797912e-12!GO:0005783;endoplasmic reticulum;3.41240635069119e-12!GO:0044257;cellular protein catabolic process;4.38426147278247e-12!GO:0016874;ligase activity;4.64060370072327e-12!GO:0048193;Golgi vesicle transport;6.39607767548611e-12!GO:0006464;protein modification process;7.43722035616209e-12!GO:0006915;apoptosis;8.18957660584647e-12!GO:0008219;cell death;1.2176460502178e-11!GO:0016265;death;1.2176460502178e-11!GO:0005743;mitochondrial inner membrane;1.92471876901976e-11!GO:0051082;unfolded protein binding;2.97991564657128e-11!GO:0031324;negative regulation of cellular metabolic process;4.11147715413242e-11!GO:0008135;translation factor activity, nucleic acid binding;4.8685771271748e-11!GO:0044265;cellular macromolecule catabolic process;6.02726192628075e-11!GO:0006605;protein targeting;6.80143529218072e-11!GO:0015935;small ribosomal subunit;9.99216783065317e-11!GO:0015934;large ribosomal subunit;1.11713448220968e-10!GO:0043285;biopolymer catabolic process;1.37137065916954e-10!GO:0032553;ribonucleotide binding;1.55466594023943e-10!GO:0032555;purine ribonucleotide binding;1.55466594023943e-10!GO:0016481;negative regulation of transcription;1.65516534554564e-10!GO:0005730;nucleolus;1.88473116439275e-10!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.84123708631417e-10!GO:0017076;purine nucleotide binding;3.17906813470335e-10!GO:0017111;nucleoside-triphosphatase activity;3.35196051395657e-10!GO:0006913;nucleocytoplasmic transport;3.6256466027701e-10!GO:0016462;pyrophosphatase activity;3.92448212631061e-10!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.14096069879064e-10!GO:0031323;regulation of cellular metabolic process;4.68735216753079e-10!GO:0009892;negative regulation of metabolic process;4.97070422829922e-10!GO:0016817;hydrolase activity, acting on acid anhydrides;5.80306962523605e-10!GO:0030163;protein catabolic process;5.84122205961908e-10!GO:0016604;nuclear body;6.69625930510412e-10!GO:0008092;cytoskeletal protein binding;7.50718687545052e-10!GO:0030036;actin cytoskeleton organization and biogenesis;8.08275609305811e-10!GO:0051169;nuclear transport;8.94773532012056e-10!GO:0044455;mitochondrial membrane part;1.12362399511413e-09!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.2009964411161e-09!GO:0006461;protein complex assembly;1.27948268704844e-09!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.63009913400556e-09!GO:0005635;nuclear envelope;2.6950735434424e-09!GO:0050136;NADH dehydrogenase (quinone) activity;2.73610719635925e-09!GO:0003954;NADH dehydrogenase activity;2.73610719635925e-09!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.73610719635925e-09!GO:0005746;mitochondrial respiratory chain;2.73610719635925e-09!GO:0006350;transcription;3.37385485444333e-09!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.76997410882855e-09!GO:0006793;phosphorus metabolic process;4.03610379630675e-09!GO:0006796;phosphate metabolic process;4.03610379630675e-09!GO:0003714;transcription corepressor activity;4.23763032004669e-09!GO:0016607;nuclear speck;5.98004875624484e-09!GO:0008565;protein transporter activity;6.3711166199176e-09!GO:0010468;regulation of gene expression;7.04432996804182e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.31975042243181e-08!GO:0000375;RNA splicing, via transesterification reactions;1.31975042243181e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.31975042243181e-08!GO:0008639;small protein conjugating enzyme activity;1.59678572020037e-08!GO:0009057;macromolecule catabolic process;1.62052284871751e-08!GO:0019899;enzyme binding;1.64045397970898e-08!GO:0044432;endoplasmic reticulum part;1.7029959228549e-08!GO:0031965;nuclear membrane;1.7701693139678e-08!GO:0030029;actin filament-based process;1.93448781919163e-08!GO:0003743;translation initiation factor activity;2.0544340387132e-08!GO:0006357;regulation of transcription from RNA polymerase II promoter;2.27134995700525e-08!GO:0004842;ubiquitin-protein ligase activity;2.45216916541505e-08!GO:0006446;regulation of translational initiation;2.58387748907306e-08!GO:0005793;ER-Golgi intermediate compartment;5.44817675954954e-08!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.45026613327354e-08!GO:0007264;small GTPase mediated signal transduction;6.21260077353518e-08!GO:0006413;translational initiation;7.52739627935721e-08!GO:0031252;leading edge;7.7925934515278e-08!GO:0016310;phosphorylation;7.90749705614495e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;8.60844384369267e-08!GO:0000502;proteasome complex (sensu Eukaryota);8.9987544801769e-08!GO:0016563;transcription activator activity;9.94546974756653e-08!GO:0019787;small conjugating protein ligase activity;1.13972760732842e-07!GO:0051246;regulation of protein metabolic process;1.37571126069216e-07!GO:0031982;vesicle;1.52841398380019e-07!GO:0045786;negative regulation of progression through cell cycle;1.60753714455239e-07!GO:0045892;negative regulation of transcription, DNA-dependent;1.68612579332088e-07!GO:0030964;NADH dehydrogenase complex (quinone);1.85426075329854e-07!GO:0045271;respiratory chain complex I;1.85426075329854e-07!GO:0005747;mitochondrial respiratory chain complex I;1.85426075329854e-07!GO:0051789;response to protein stimulus;2.01752414430063e-07!GO:0006986;response to unfolded protein;2.01752414430063e-07!GO:0031988;membrane-bound vesicle;2.01752414430063e-07!GO:0032774;RNA biosynthetic process;2.08311171905016e-07!GO:0006351;transcription, DNA-dependent;2.0891219208123e-07!GO:0042775;organelle ATP synthesis coupled electron transport;2.24645616849384e-07!GO:0042773;ATP synthesis coupled electron transport;2.24645616849384e-07!GO:0005768;endosome;2.28290339314409e-07!GO:0031410;cytoplasmic vesicle;2.50458562215944e-07!GO:0044248;cellular catabolic process;2.8915063911783e-07!GO:0017038;protein import;2.8915063911783e-07!GO:0008361;regulation of cell size;3.05429129263916e-07!GO:0045449;regulation of transcription;3.13579326126626e-07!GO:0016023;cytoplasmic membrane-bound vesicle;3.13579326126626e-07!GO:0007243;protein kinase cascade;3.28204161776391e-07!GO:0009055;electron carrier activity;3.43094620063118e-07!GO:0003713;transcription coactivator activity;3.44564752667717e-07!GO:0032559;adenyl ribonucleotide binding;3.61155212521387e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.04156362434212e-07!GO:0005524;ATP binding;5.60878295637706e-07!GO:0016049;cell growth;5.95860488688636e-07!GO:0048522;positive regulation of cellular process;6.04213116133973e-07!GO:0043069;negative regulation of programmed cell death;7.88377267247552e-07!GO:0030554;adenyl nucleotide binding;7.940125043971e-07!GO:0031980;mitochondrial lumen;9.27505791607201e-07!GO:0005759;mitochondrial matrix;9.27505791607201e-07!GO:0043066;negative regulation of apoptosis;1.42793684399122e-06!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.63629731880162e-06!GO:0051170;nuclear import;2.67494381474234e-06!GO:0006606;protein import into nucleus;2.81976657065485e-06!GO:0043067;regulation of programmed cell death;2.88598289889966e-06!GO:0042981;regulation of apoptosis;3.01679893583562e-06!GO:0016044;membrane organization and biogenesis;3.21485905307939e-06!GO:0005667;transcription factor complex;3.31600669767297e-06!GO:0006916;anti-apoptosis;3.99931881339376e-06!GO:0003924;GTPase activity;4.04604344154801e-06!GO:0003779;actin binding;4.21386546699935e-06!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.21386546699935e-06!GO:0001558;regulation of cell growth;4.25210671606132e-06!GO:0016568;chromatin modification;4.43044805472026e-06!GO:0006355;regulation of transcription, DNA-dependent;4.44777827683217e-06!GO:0044453;nuclear membrane part;4.69021927726556e-06!GO:0048518;positive regulation of biological process;4.71613770908404e-06!GO:0045893;positive regulation of transcription, DNA-dependent;6.46130057265319e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.39174153511682e-06!GO:0007242;intracellular signaling cascade;8.60400044243742e-06!GO:0005761;mitochondrial ribosome;8.77816195381355e-06!GO:0000313;organellar ribosome;8.77816195381355e-06!GO:0016881;acid-amino acid ligase activity;1.11482672779823e-05!GO:0048475;coated membrane;1.17541063889329e-05!GO:0030117;membrane coat;1.17541063889329e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.19077751539566e-05!GO:0030120;vesicle coat;1.30653352787491e-05!GO:0030662;coated vesicle membrane;1.30653352787491e-05!GO:0005525;GTP binding;1.39389486210922e-05!GO:0045941;positive regulation of transcription;1.41696331554624e-05!GO:0000245;spliceosome assembly;1.46006164236675e-05!GO:0006259;DNA metabolic process;1.4689457272454e-05!GO:0044431;Golgi apparatus part;1.54050988223686e-05!GO:0019829;cation-transporting ATPase activity;1.65534061016079e-05!GO:0015986;ATP synthesis coupled proton transport;1.90800429213448e-05!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.90800429213448e-05!GO:0008286;insulin receptor signaling pathway;1.93380303769505e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.09437962974342e-05!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.28724771204835e-05!GO:0005773;vacuole;2.84704739753394e-05!GO:0005789;endoplasmic reticulum membrane;2.88952075659054e-05!GO:0003702;RNA polymerase II transcription factor activity;3.23399891978825e-05!GO:0005788;endoplasmic reticulum lumen;3.63765234114549e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.76541422915182e-05!GO:0005643;nuclear pore;3.82812263196003e-05!GO:0007010;cytoskeleton organization and biogenesis;4.10289407994152e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.27359471135991e-05!GO:0051186;cofactor metabolic process;4.34870092667463e-05!GO:0016887;ATPase activity;4.7544891056667e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;5.37738560964746e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.37738560964746e-05!GO:0007265;Ras protein signal transduction;5.47715349733865e-05!GO:0050657;nucleic acid transport;5.56848908258729e-05!GO:0051236;establishment of RNA localization;5.56848908258729e-05!GO:0050658;RNA transport;5.56848908258729e-05!GO:0009966;regulation of signal transduction;5.59499557194803e-05!GO:0006403;RNA localization;6.48645897763593e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.58890066247284e-05!GO:0051726;regulation of cell cycle;7.44913157661508e-05!GO:0032561;guanyl ribonucleotide binding;7.46889049328397e-05!GO:0019001;guanyl nucleotide binding;7.46889049328397e-05!GO:0042802;identical protein binding;7.46889049328397e-05!GO:0030532;small nuclear ribonucleoprotein complex;7.58322170699066e-05!GO:0032446;protein modification by small protein conjugation;7.59878977825066e-05!GO:0030027;lamellipodium;8.56082712600602e-05!GO:0000074;regulation of progression through cell cycle;8.93461861717982e-05!GO:0005770;late endosome;9.11919215577734e-05!GO:0005791;rough endoplasmic reticulum;0.000107813090513931!GO:0005083;small GTPase regulator activity;0.000113672524418388!GO:0044440;endosomal part;0.000118476077678683!GO:0010008;endosome membrane;0.000118476077678683!GO:0016567;protein ubiquitination;0.000135938819711626!GO:0000323;lytic vacuole;0.000141829039358001!GO:0005764;lysosome;0.000141829039358001!GO:0006323;DNA packaging;0.000147877476055027!GO:0005798;Golgi-associated vesicle;0.0001641518311619!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000165559815227191!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000167069529989334!GO:0004812;aminoacyl-tRNA ligase activity;0.000167069529989334!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000167069529989334!GO:0007167;enzyme linked receptor protein signaling pathway;0.0001680259987925!GO:0030867;rough endoplasmic reticulum membrane;0.000174291771759928!GO:0007049;cell cycle;0.000188924504845216!GO:0046930;pore complex;0.000202389369050653!GO:0048468;cell development;0.000206713744107651!GO:0048471;perinuclear region of cytoplasm;0.000210005008524174!GO:0006754;ATP biosynthetic process;0.000214895116798304!GO:0006753;nucleoside phosphate metabolic process;0.000214895116798304!GO:0043566;structure-specific DNA binding;0.0002255717192274!GO:0030133;transport vesicle;0.000238279972329486!GO:0001726;ruffle;0.000240801660611135!GO:0008026;ATP-dependent helicase activity;0.000242701012312227!GO:0003724;RNA helicase activity;0.000242701012312227!GO:0045259;proton-transporting ATP synthase complex;0.00024999476378669!GO:0016469;proton-transporting two-sector ATPase complex;0.000251906260028556!GO:0040008;regulation of growth;0.000261131102564846!GO:0006897;endocytosis;0.000270181898319844!GO:0010324;membrane invagination;0.000270181898319844!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.000270292871630831!GO:0009060;aerobic respiration;0.000309046775214729!GO:0009142;nucleoside triphosphate biosynthetic process;0.000322320918182866!GO:0009201;ribonucleoside triphosphate biosynthetic process;0.000322320918182866!GO:0006732;coenzyme metabolic process;0.000343087884504004!GO:0000151;ubiquitin ligase complex;0.000344721252318639!GO:0006613;cotranslational protein targeting to membrane;0.000352343549508147!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;0.000352343549508147!GO:0009145;purine nucleoside triphosphate biosynthetic process;0.000352343549508147!GO:0042623;ATPase activity, coupled;0.000354207383558625!GO:0030695;GTPase regulator activity;0.000395828315852712!GO:0009056;catabolic process;0.000421992316979383!GO:0000139;Golgi membrane;0.000433792768950418!GO:0016197;endosome transport;0.000445017739652669!GO:0065009;regulation of a molecular function;0.00044756915573605!GO:0033673;negative regulation of kinase activity;0.000469984783763393!GO:0006469;negative regulation of protein kinase activity;0.000469984783763393!GO:0043038;amino acid activation;0.00047186292355825!GO:0006418;tRNA aminoacylation for protein translation;0.00047186292355825!GO:0043039;tRNA aminoacylation;0.00047186292355825!GO:0046034;ATP metabolic process;0.000496535884266627!GO:0009199;ribonucleoside triphosphate metabolic process;0.000521580288640828!GO:0005769;early endosome;0.000529948946760137!GO:0015078;hydrogen ion transmembrane transporter activity;0.000531860318126715!GO:0009205;purine ribonucleoside triphosphate metabolic process;0.000573972104847244!GO:0009144;purine nucleoside triphosphate metabolic process;0.000573972104847244!GO:0004386;helicase activity;0.000586574312774587!GO:0051128;regulation of cellular component organization and biogenesis;0.000605364015232947!GO:0005100;Rho GTPase activator activity;0.000610726743125505!GO:0009141;nucleoside triphosphate metabolic process;0.000648976888701813!GO:0006892;post-Golgi vesicle-mediated transport;0.000728688943425591!GO:0051028;mRNA transport;0.000876030395772843!GO:0008047;enzyme activator activity;0.000901109514110687!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000987601698204713!GO:0008154;actin polymerization and/or depolymerization;0.00102610528931716!GO:0051348;negative regulation of transferase activity;0.00108712228449234!GO:0030041;actin filament polymerization;0.00114169811493935!GO:0045333;cellular respiration;0.00114169811493935!GO:0019904;protein domain specific binding;0.00118567049499315!GO:0005096;GTPase activator activity;0.00119294471580993!GO:0006950;response to stress;0.0012325118268847!GO:0042254;ribosome biogenesis and assembly;0.0012325118268847!GO:0005741;mitochondrial outer membrane;0.00130353926499969!GO:0006693;prostaglandin metabolic process;0.0013124617898662!GO:0006692;prostanoid metabolic process;0.0013124617898662!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00137896449609295!GO:0006163;purine nucleotide metabolic process;0.00143166561801244!GO:0009150;purine ribonucleotide metabolic process;0.00160297571789972!GO:0051427;hormone receptor binding;0.00164200861756516!GO:0008270;zinc ion binding;0.00164761295320015!GO:0009259;ribonucleotide metabolic process;0.00181944903348089!GO:0065002;intracellular protein transport across a membrane;0.00184208175856186!GO:0045792;negative regulation of cell size;0.00188575658482884!GO:0006164;purine nucleotide biosynthetic process;0.00190032697315761!GO:0009152;purine ribonucleotide biosynthetic process;0.00207815183287597!GO:0005099;Ras GTPase activator activity;0.0021352731340284!GO:0006402;mRNA catabolic process;0.00217339278581086!GO:0031968;organelle outer membrane;0.00224622905866113!GO:0006607;NLS-bearing substrate import into nucleus;0.00225945674073574!GO:0008287;protein serine/threonine phosphatase complex;0.00226407128129786!GO:0043021;ribonucleoprotein binding;0.00232169248891235!GO:0030308;negative regulation of cell growth;0.00232683465906318!GO:0005905;coated pit;0.00237695478763069!GO:0005885;Arp2/3 protein complex;0.00239222819807773!GO:0015980;energy derivation by oxidation of organic compounds;0.00253897635990672!GO:0046914;transition metal ion binding;0.00253897635990672!GO:0007169;transmembrane receptor protein tyrosine kinase signaling pathway;0.00261267960015174!GO:0006099;tricarboxylic acid cycle;0.00271063077254676!GO:0046356;acetyl-CoA catabolic process;0.00271063077254676!GO:0051087;chaperone binding;0.00282174911452619!GO:0035257;nuclear hormone receptor binding;0.00295290747806273!GO:0051270;regulation of cell motility;0.00295581623011988!GO:0000902;cell morphogenesis;0.00306740078842562!GO:0032989;cellular structure morphogenesis;0.00306740078842562!GO:0006091;generation of precursor metabolites and energy;0.00307230920240944!GO:0019867;outer membrane;0.00315361069808702!GO:0035258;steroid hormone receptor binding;0.00330546977304412!GO:0051168;nuclear export;0.00331726298873425!GO:0001944;vasculature development;0.00333271708781237!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00337918180824179!GO:0001666;response to hypoxia;0.00342842575948445!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00348492497944175!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00350098860778758!GO:0008186;RNA-dependent ATPase activity;0.00353570774126523!GO:0008250;oligosaccharyl transferase complex;0.00354799527740755!GO:0031072;heat shock protein binding;0.00357842035774232!GO:0051287;NAD binding;0.00379582737796283!GO:0009260;ribonucleotide biosynthetic process;0.00386804986982616!GO:0043623;cellular protein complex assembly;0.00390124613565351!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00398877443845718!GO:0019843;rRNA binding;0.00409175028745578!GO:0003697;single-stranded DNA binding;0.00410232418143603!GO:0042026;protein refolding;0.00410359023333397!GO:0007266;Rho protein signal transduction;0.0041510449396092!GO:0051920;peroxiredoxin activity;0.00419379411160746!GO:0009893;positive regulation of metabolic process;0.00419379411160746!GO:0017166;vinculin binding;0.00423446738566149!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00436017340302418!GO:0051187;cofactor catabolic process;0.00444826915332351!GO:0051276;chromosome organization and biogenesis;0.00457083742508425!GO:0006612;protein targeting to membrane;0.00463694920301677!GO:0043488;regulation of mRNA stability;0.00467805205656391!GO:0043487;regulation of RNA stability;0.00467805205656391!GO:0033116;ER-Golgi intermediate compartment membrane;0.00469571608215752!GO:0005839;proteasome core complex (sensu Eukaryota);0.00475627387841814!GO:0003690;double-stranded DNA binding;0.00492008876286862!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00494075438170043!GO:0001568;blood vessel development;0.00506471823341138!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00515139379464246!GO:0030100;regulation of endocytosis;0.0053340298724183!GO:0005813;centrosome;0.00545094643710255!GO:0009109;coenzyme catabolic process;0.00559218330197069!GO:0006084;acetyl-CoA metabolic process;0.00560161928752761!GO:0007050;cell cycle arrest;0.00587750546769198!GO:0016301;kinase activity;0.00590903100867746!GO:0030118;clathrin coat;0.00597178362096803!GO:0051188;cofactor biosynthetic process;0.00604666640406901!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00627810693428421!GO:0030518;steroid hormone receptor signaling pathway;0.00629636792543303!GO:0009967;positive regulation of signal transduction;0.00629636792543303!GO:0005912;adherens junction;0.00660435634204745!GO:0006979;response to oxidative stress;0.00677459963992759!GO:0051252;regulation of RNA metabolic process;0.0068845801102301!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.00710390681795058!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00733997739459682!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00733997739459682!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00733997739459682!GO:0030132;clathrin coat of coated pit;0.00735019509136496!GO:0051101;regulation of DNA binding;0.00758833337640137!GO:0031589;cell-substrate adhesion;0.00773178402307122!GO:0030134;ER to Golgi transport vesicle;0.00776280770861896!GO:0006752;group transfer coenzyme metabolic process;0.00821218211266801!GO:0004576;oligosaccharyl transferase activity;0.00840149166956328!GO:0030865;cortical cytoskeleton organization and biogenesis;0.00885094151076984!GO:0016859;cis-trans isomerase activity;0.00906392750552247!GO:0004004;ATP-dependent RNA helicase activity;0.00906896740973132!GO:0046983;protein dimerization activity;0.00930088260587415!GO:0005048;signal sequence binding;0.00953035281781608!GO:0050811;GABA receptor binding;0.0097857994427757!GO:0040012;regulation of locomotion;0.00989021248344701!GO:0004674;protein serine/threonine kinase activity;0.0100572475376728!GO:0008139;nuclear localization sequence binding;0.0105446303787477!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0106063862431893!GO:0048487;beta-tubulin binding;0.0106419123216699!GO:0003729;mRNA binding;0.0109634913953132!GO:0005762;mitochondrial large ribosomal subunit;0.0112608793534307!GO:0000315;organellar large ribosomal subunit;0.0112608793534307!GO:0045045;secretory pathway;0.0115518576997804!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.0118564130483382!GO:0040011;locomotion;0.0119689954058168!GO:0007160;cell-matrix adhesion;0.0124060306837229!GO:0009108;coenzyme biosynthetic process;0.0124422396034553!GO:0030658;transport vesicle membrane;0.0128193387919563!GO:0006401;RNA catabolic process;0.0132744321605496!GO:0004177;aminopeptidase activity;0.0132912714925972!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0133477778422892!GO:0004722;protein serine/threonine phosphatase activity;0.0134403921898148!GO:0031901;early endosome membrane;0.0148257683146051!GO:0006468;protein amino acid phosphorylation;0.0155496370431571!GO:0005815;microtubule organizing center;0.0157880713330329!GO:0004860;protein kinase inhibitor activity;0.0157977555694642!GO:0031325;positive regulation of cellular metabolic process;0.0159514425506432!GO:0001516;prostaglandin biosynthetic process;0.0159628666506713!GO:0046457;prostanoid biosynthetic process;0.0159628666506713!GO:0045661;regulation of myoblast differentiation;0.0160355532013472!GO:0015631;tubulin binding;0.0162404918498771!GO:0007005;mitochondrion organization and biogenesis;0.0163997330639827!GO:0045926;negative regulation of growth;0.016433175242734!GO:0019902;phosphatase binding;0.016689666564984!GO:0050790;regulation of catalytic activity;0.016689666564984!GO:0030119;AP-type membrane coat adaptor complex;0.0167370003669395!GO:0005938;cell cortex;0.0176816308624923!GO:0051098;regulation of binding;0.0179843425029185!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.018168260661259!GO:0022415;viral reproductive process;0.0183855459717302!GO:0006376;mRNA splice site selection;0.0186021840506238!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0186021840506238!GO:0004298;threonine endopeptidase activity;0.0186021840506238!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0190043018949723!GO:0030127;COPII vesicle coat;0.0191383308647859!GO:0012507;ER to Golgi transport vesicle membrane;0.0191383308647859!GO:0006399;tRNA metabolic process;0.0194220509641432!GO:0043086;negative regulation of catalytic activity;0.0195803936371277!GO:0016363;nuclear matrix;0.0195904162696562!GO:0043407;negative regulation of MAP kinase activity;0.0203513142465862!GO:0004721;phosphoprotein phosphatase activity;0.0208076345432579!GO:0060090;molecular adaptor activity;0.021023554114191!GO:0016791;phosphoric monoester hydrolase activity;0.0212714684853669!GO:0022402;cell cycle process;0.0212714684853669!GO:0016072;rRNA metabolic process;0.0222133937368842!GO:0006611;protein export from nucleus;0.0228701159525232!GO:0015630;microtubule cytoskeleton;0.0231497577516245!GO:0051674;localization of cell;0.0231497577516245!GO:0006928;cell motility;0.0231497577516245!GO:0030131;clathrin adaptor complex;0.0233105152985228!GO:0005832;chaperonin-containing T-complex;0.0237109564864488!GO:0035035;histone acetyltransferase binding;0.0238187918253997!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0238187918253997!GO:0033043;regulation of organelle organization and biogenesis;0.0238187918253997!GO:0008654;phospholipid biosynthetic process;0.0238187918253997!GO:0051338;regulation of transferase activity;0.0238995694808936!GO:0003682;chromatin binding;0.0243157330746811!GO:0043034;costamere;0.0243672488068167!GO:0018196;peptidyl-asparagine modification;0.0245738154632652!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0245738154632652!GO:0045454;cell redox homeostasis;0.0246891011324078!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0248669613012462!GO:0016491;oxidoreductase activity;0.024930931572032!GO:0003746;translation elongation factor activity;0.0255262121716083!GO:0006417;regulation of translation;0.025898073176796!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0259197853912923!GO:0015399;primary active transmembrane transporter activity;0.0259197853912923!GO:0031902;late endosome membrane;0.026310778578774!GO:0005159;insulin-like growth factor receptor binding;0.0265646300618366!GO:0008601;protein phosphatase type 2A regulator activity;0.0266689434520887!GO:0048500;signal recognition particle;0.0273967870528785!GO:0006891;intra-Golgi vesicle-mediated transport;0.0277281265769039!GO:0030660;Golgi-associated vesicle membrane;0.0279687409170496!GO:0004672;protein kinase activity;0.0286981092269702!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.0292341685463762!GO:0031349;positive regulation of defense response;0.0301346370502256!GO:0050729;positive regulation of inflammatory response;0.0301346370502256!GO:0005057;receptor signaling protein activity;0.0303236575133037!GO:0030659;cytoplasmic vesicle membrane;0.0305598248507058!GO:0016281;eukaryotic translation initiation factor 4F complex;0.030747937293243!GO:0016311;dephosphorylation;0.030747937293243!GO:0008064;regulation of actin polymerization and/or depolymerization;0.030747937293243!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.030857749007055!GO:0030833;regulation of actin filament polymerization;0.0320742568568596!GO:0030522;intracellular receptor-mediated signaling pathway;0.0323973611139143!GO:0030663;COPI coated vesicle membrane;0.0323973611139143!GO:0030126;COPI vesicle coat;0.0323973611139143!GO:0018193;peptidyl-amino acid modification;0.0323973611139143!GO:0031625;ubiquitin protein ligase binding;0.0336068598758651!GO:0043087;regulation of GTPase activity;0.0345449568098185!GO:0006364;rRNA processing;0.0350793020531016!GO:0043549;regulation of kinase activity;0.0357204626254844!GO:0043022;ribosome binding;0.0357658210982069!GO:0045637;regulation of myeloid cell differentiation;0.035842528806896!GO:0046822;regulation of nucleocytoplasmic transport;0.0358580206530933!GO:0043681;protein import into mitochondrion;0.0365748605863116!GO:0043492;ATPase activity, coupled to movement of substances;0.037102289352501!GO:0005637;nuclear inner membrane;0.0372960402397957!GO:0015629;actin cytoskeleton;0.0376509850722587!GO:0006414;translational elongation;0.0378421054220023!GO:0030218;erythrocyte differentiation;0.0380564293694046!GO:0006509;membrane protein ectodomain proteolysis;0.0382568323500197!GO:0033619;membrane protein proteolysis;0.0382568323500197!GO:0051540;metal cluster binding;0.0387578536917518!GO:0051536;iron-sulfur cluster binding;0.0387578536917518!GO:0007004;telomere maintenance via telomerase;0.0397159322300418!GO:0003817;complement factor D activity;0.0402295910021014!GO:0030911;TPR domain binding;0.0406788238460303!GO:0008234;cysteine-type peptidase activity;0.0409610568434231!GO:0009117;nucleotide metabolic process;0.0427577590088571!GO:0019210;kinase inhibitor activity;0.0438481419087524!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0452927602980084!GO:0030137;COPI-coated vesicle;0.045681807105576!GO:0032940;secretion by cell;0.0463991329286896!GO:0031532;actin cytoskeleton reorganization;0.0465579269632452!GO:0030521;androgen receptor signaling pathway;0.0472852839040026!GO:0016853;isomerase activity;0.0472852839040026!GO:0008097;5S rRNA binding;0.0473726618373002!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0475424335930783!GO:0030125;clathrin vesicle coat;0.0480942088373958!GO:0030665;clathrin coated vesicle membrane;0.0480942088373958!GO:0048514;blood vessel morphogenesis;0.0482318237446891!GO:0006470;protein amino acid dephosphorylation;0.048564006052687!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.048564006052687!GO:0015002;heme-copper terminal oxidase activity;0.048564006052687!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.048564006052687!GO:0004129;cytochrome-c oxidase activity;0.048564006052687!GO:0032287;myelin maintenance in the peripheral nervous system;0.0489968673860077!GO:0032838;cell projection cytoplasm;0.0489968673860077!GO:0033081;regulation of T cell differentiation in the thymus;0.0489968673860077!GO:0043217;myelin maintenance;0.0489968673860077!GO:0060087;relaxation of vascular smooth muscle;0.0489968673860077!GO:0032839;dendrite cytoplasm;0.0489968673860077!GO:0046578;regulation of Ras protein signal transduction;0.0490327827996946!GO:0006672;ceramide metabolic process;0.0493604711429377 | |||
|sample_id=10204 | |sample_id=10204 | ||
|sample_note= | |sample_note= | ||
|sample_sex= | |sample_sex=F | ||
|sample_species=Human (Homo sapiens) | |sample_species=Human (Homo sapiens) | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue= | |sample_tissue= | ||
|top_motifs=HSF1,2:4.05982555738;PATZ1:2.29318610147;STAT2,4,6:2.16593715185;MAZ:2.09974953038;FOXO1,3,4:2.07796574052;AR:2.07270231215;NFATC1..3:2.05641212291;FOX{D1,D2}:1.96142465634;TFAP2{A,C}:1.85543115899;SP1:1.85382420139;TFAP2B:1.76389424854;MED-1{core}:1.74833484868;MZF1:1.72410784324;FOX{I1,J2}:1.68991146003;HIC1:1.54568804234;MTE{core}:1.53303707476;SRF:1.52406118909;TLX1..3_NFIC{dimer}:1.46588314336;TFCP2:1.44377209223;GTF2I:1.44304700303;EGR1..3:1.38106034521;EP300:1.32662357505;MTF1:1.31256725619;STAT1,3:1.30871408811;IKZF1:1.28981557622;PAX1,9:1.24391950452;HMX1:1.24124906974;TBP:1.23071940557;TFAP4:1.22867041916;ZNF238:1.17095013198;SOX5:1.11523108393;RBPJ:1.07280877352;HBP1_HMGB_SSRP1_UBTF:0.989617690522;VSX1,2:0.988952490728;SPZ1:0.982591714285;PAX6:0.967305091537;XCPE1{core}:0.963968320769;PRDM1:0.956644843172;RREB1:0.945809258678;ATF6:0.933815867864;GFI1B:0.905179199577;TEAD1:0.863466260468;MYFfamily:0.854525716994;NR3C1:0.850117975314;TGIF1:0.844365351568;TLX2:0.843360844501;ZNF148:0.768576841223;TBX4,5:0.755179726103;IRF7:0.737449563697;POU6F1:0.718223919841;BREu{core}:0.698945424001;GTF2A1,2:0.678473597116;MEF2{A,B,C,D}:0.625784264927;NANOG:0.618882518016;GATA6:0.618427973329;ATF2:0.612807979779;ZFP161:0.56798751033;PDX1:0.567352229656;NKX2-1,4:0.546056736706;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.534138169911;PAX5:0.454251918655;SREBF1,2:0.4396013084;MYBL2:0.431255564106;NR1H4:0.418865453019;SMAD1..7,9:0.407298439823;FOXQ1:0.403625613643;HAND1,2:0.386416799879;HNF1A:0.385997689694;SOX2:0.357836496857;TEF:0.354522860053;CDX1,2,4:0.343077605459;HOX{A6,A7,B6,B7}:0.335478253571;ATF4:0.335262323667;NHLH1,2:0.324853134058;MAFB:0.323561950203;REST:0.30355636155;ETS1,2:0.297318520548;IKZF2:0.289209944201;ZIC1..3:0.283340498191;FOXP3:0.264175324379;ZNF423:0.254268046882;ZEB1:0.213388831709;CUX2:0.211744990434;GLI1..3:0.210577951078;FOXM1:0.202851774304;SPIB:0.200066144188;JUN:0.198141816291;PRRX1,2:0.146154947266;ESRRA:0.142650732512;NFE2L2:0.141416159817;FOXN1:0.140404805805;SNAI1..3:0.12451289129;CEBPA,B_DDIT3:0.106152223985;POU1F1:0.105188201083;CDC5L:0.0978987392612;FOXA2:0.0961700952029;ZNF143:0.0708208670302;XBP1:0.0698048865272;SPI1:0.0627765642021;FOX{F1,F2,J1}:0.0486938967078;ATF5_CREB3:0.0430340329703;RORA:0.0237391439581;GATA4:0.0113685560121;HNF4A_NR2F1,2:0.00822993741218;EBF1:0.006221446614;AHR_ARNT_ARNT2:-0.044125952876;IRF1,2:-0.0686378769614;HES1:-0.0727336830657;BPTF:-0.0731282556335;NFIX:-0.0839065363428;POU5F1:-0.11226446496;HLF:-0.124846147681;HIF1A:-0.126122706012;LHX3,4:-0.138419502659;KLF4:-0.154013491602;RFX2..5_RFXANK_RFXAP:-0.157281780328;NR5A1,2:-0.177679869424;ELF1,2,4:-0.183147062667;TP53:-0.184509663773;FOXL1:-0.185334728326;bHLH_family:-0.20066629004;NFE2:-0.204636010774;SOX{8,9,10}:-0.214187744768;FOSL2:-0.226340648461;PBX1:-0.233799122271;POU3F1..4:-0.235813502552;NANOG{mouse}:-0.247441472348;TFDP1:-0.248479635166;SOX17:-0.254861917622;NKX2-2,8:-0.256027550021;NKX6-1,2:-0.258709420117;RXRA_VDR{dimer}:-0.258791820987;EN1,2:-0.26423422547;HOXA9_MEIS1:-0.271399149978;GZF1:-0.280006262388;AIRE:-0.280627773143;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.304990789133;NKX2-3_NKX2-5:-0.317059415607;MYOD1:-0.329772836595;FOS_FOS{B,L1}_JUN{B,D}:-0.338341042566;DBP:-0.342494518902;LMO2:-0.346304005826;BACH2:-0.351057584051;NFIL3:-0.356972800903;T:-0.400734604279;ESR1:-0.401272490591;CREB1:-0.403171485966;ZBTB6:-0.406535668692;NRF1:-0.408213420568;NFKB1_REL_RELA:-0.431676555411;PITX1..3:-0.449927320732;STAT5{A,B}:-0.492758364431;EVI1:-0.512522346031;NKX3-2:-0.515007407368;ZNF384:-0.527231911146;RUNX1..3:-0.529005965926;RXR{A,B,G}:-0.543240261736;ADNP_IRX_SIX_ZHX:-0.555043299545;ARID5B:-0.572296404926;FOXP1:-0.583147756979;UFEwm:-0.618704390645;GFI1:-0.637582160766;PAX3,7:-0.645152287784;RFX1:-0.649120378783;PAX2:-0.681096431159;FOXD3:-0.716869519111;PPARG:-0.71981410813;NR6A1:-0.749325046954;ALX1:-0.769550992452;NFY{A,B,C}:-0.782619698926;TOPORS:-0.782928161396;GCM1,2:-0.810408044566;ALX4:-0.835004379312;ZBTB16:-0.893808801129;HOX{A4,D4}:-0.89544809174;LEF1_TCF7_TCF7L1,2:-0.954866410962;DMAP1_NCOR{1,2}_SMARC:-0.957384292064;HMGA1,2:-0.961407471924;NFE2L1:-0.985536939899;E2F1..5:-1.02426005567;TAL1_TCF{3,4,12}:-1.02597158306;CRX:-1.04795390427;POU2F1..3:-1.10881568622;MYB:-1.17080997855;HOX{A5,B5}:-1.20799032201;OCT4_SOX2{dimer}:-1.26681730532;NKX3-1:-1.2742030585;ONECUT1,2:-1.44126721947;ELK1,4_GABP{A,B1}:-1.55955745082;YY1:-1.83209737797;PAX8:-2.24604658884;PAX4:-2.61414279245 | |top_motifs=HSF1,2:4.05982555738;PATZ1:2.29318610147;STAT2,4,6:2.16593715185;MAZ:2.09974953038;FOXO1,3,4:2.07796574052;AR:2.07270231215;NFATC1..3:2.05641212291;FOX{D1,D2}:1.96142465634;TFAP2{A,C}:1.85543115899;SP1:1.85382420139;TFAP2B:1.76389424854;MED-1{core}:1.74833484868;MZF1:1.72410784324;FOX{I1,J2}:1.68991146003;HIC1:1.54568804234;MTE{core}:1.53303707476;SRF:1.52406118909;TLX1..3_NFIC{dimer}:1.46588314336;TFCP2:1.44377209223;GTF2I:1.44304700303;EGR1..3:1.38106034521;EP300:1.32662357505;MTF1:1.31256725619;STAT1,3:1.30871408811;IKZF1:1.28981557622;PAX1,9:1.24391950452;HMX1:1.24124906974;TBP:1.23071940557;TFAP4:1.22867041916;ZNF238:1.17095013198;SOX5:1.11523108393;RBPJ:1.07280877352;HBP1_HMGB_SSRP1_UBTF:0.989617690522;VSX1,2:0.988952490728;SPZ1:0.982591714285;PAX6:0.967305091537;XCPE1{core}:0.963968320769;PRDM1:0.956644843172;RREB1:0.945809258678;ATF6:0.933815867864;GFI1B:0.905179199577;TEAD1:0.863466260468;MYFfamily:0.854525716994;NR3C1:0.850117975314;TGIF1:0.844365351568;TLX2:0.843360844501;ZNF148:0.768576841223;TBX4,5:0.755179726103;IRF7:0.737449563697;POU6F1:0.718223919841;BREu{core}:0.698945424001;GTF2A1,2:0.678473597116;MEF2{A,B,C,D}:0.625784264927;NANOG:0.618882518016;GATA6:0.618427973329;ATF2:0.612807979779;ZFP161:0.56798751033;PDX1:0.567352229656;NKX2-1,4:0.546056736706;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.534138169911;PAX5:0.454251918655;SREBF1,2:0.4396013084;MYBL2:0.431255564106;NR1H4:0.418865453019;SMAD1..7,9:0.407298439823;FOXQ1:0.403625613643;HAND1,2:0.386416799879;HNF1A:0.385997689694;SOX2:0.357836496857;TEF:0.354522860053;CDX1,2,4:0.343077605459;HOX{A6,A7,B6,B7}:0.335478253571;ATF4:0.335262323667;NHLH1,2:0.324853134058;MAFB:0.323561950203;REST:0.30355636155;ETS1,2:0.297318520548;IKZF2:0.289209944201;ZIC1..3:0.283340498191;FOXP3:0.264175324379;ZNF423:0.254268046882;ZEB1:0.213388831709;CUX2:0.211744990434;GLI1..3:0.210577951078;FOXM1:0.202851774304;SPIB:0.200066144188;JUN:0.198141816291;PRRX1,2:0.146154947266;ESRRA:0.142650732512;NFE2L2:0.141416159817;FOXN1:0.140404805805;SNAI1..3:0.12451289129;CEBPA,B_DDIT3:0.106152223985;POU1F1:0.105188201083;CDC5L:0.0978987392612;FOXA2:0.0961700952029;ZNF143:0.0708208670302;XBP1:0.0698048865272;SPI1:0.0627765642021;FOX{F1,F2,J1}:0.0486938967078;ATF5_CREB3:0.0430340329703;RORA:0.0237391439581;GATA4:0.0113685560121;HNF4A_NR2F1,2:0.00822993741218;EBF1:0.006221446614;AHR_ARNT_ARNT2:-0.044125952876;IRF1,2:-0.0686378769614;HES1:-0.0727336830657;BPTF:-0.0731282556335;NFIX:-0.0839065363428;POU5F1:-0.11226446496;HLF:-0.124846147681;HIF1A:-0.126122706012;LHX3,4:-0.138419502659;KLF4:-0.154013491602;RFX2..5_RFXANK_RFXAP:-0.157281780328;NR5A1,2:-0.177679869424;ELF1,2,4:-0.183147062667;TP53:-0.184509663773;FOXL1:-0.185334728326;bHLH_family:-0.20066629004;NFE2:-0.204636010774;SOX{8,9,10}:-0.214187744768;FOSL2:-0.226340648461;PBX1:-0.233799122271;POU3F1..4:-0.235813502552;NANOG{mouse}:-0.247441472348;TFDP1:-0.248479635166;SOX17:-0.254861917622;NKX2-2,8:-0.256027550021;NKX6-1,2:-0.258709420117;RXRA_VDR{dimer}:-0.258791820987;EN1,2:-0.26423422547;HOXA9_MEIS1:-0.271399149978;GZF1:-0.280006262388;AIRE:-0.280627773143;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.304990789133;NKX2-3_NKX2-5:-0.317059415607;MYOD1:-0.329772836595;FOS_FOS{B,L1}_JUN{B,D}:-0.338341042566;DBP:-0.342494518902;LMO2:-0.346304005826;BACH2:-0.351057584051;NFIL3:-0.356972800903;T:-0.400734604279;ESR1:-0.401272490591;CREB1:-0.403171485966;ZBTB6:-0.406535668692;NRF1:-0.408213420568;NFKB1_REL_RELA:-0.431676555411;PITX1..3:-0.449927320732;STAT5{A,B}:-0.492758364431;EVI1:-0.512522346031;NKX3-2:-0.515007407368;ZNF384:-0.527231911146;RUNX1..3:-0.529005965926;RXR{A,B,G}:-0.543240261736;ADNP_IRX_SIX_ZHX:-0.555043299545;ARID5B:-0.572296404926;FOXP1:-0.583147756979;UFEwm:-0.618704390645;GFI1:-0.637582160766;PAX3,7:-0.645152287784;RFX1:-0.649120378783;PAX2:-0.681096431159;FOXD3:-0.716869519111;PPARG:-0.71981410813;NR6A1:-0.749325046954;ALX1:-0.769550992452;NFY{A,B,C}:-0.782619698926;TOPORS:-0.782928161396;GCM1,2:-0.810408044566;ALX4:-0.835004379312;ZBTB16:-0.893808801129;HOX{A4,D4}:-0.89544809174;LEF1_TCF7_TCF7L1,2:-0.954866410962;DMAP1_NCOR{1,2}_SMARC:-0.957384292064;HMGA1,2:-0.961407471924;NFE2L1:-0.985536939899;E2F1..5:-1.02426005567;TAL1_TCF{3,4,12}:-1.02597158306;CRX:-1.04795390427;POU2F1..3:-1.10881568622;MYB:-1.17080997855;HOX{A5,B5}:-1.20799032201;OCT4_SOX2{dimer}:-1.26681730532;NKX3-1:-1.2742030585;ONECUT1,2:-1.44126721947;ELK1,4_GABP{A,B1}:-1.55955745082;YY1:-1.83209737797;PAX8:-2.24604658884;PAX4:-2.61414279245 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10204-103F6;search_select_hide=table117:FF:10204-103F6 | |||
}} | }} | ||
Latest revision as of 13:56, 3 June 2020
| Name: | vagina, adult |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12854 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12854
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12854
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0158 |
| 10 | 10 | 0.0517 |
| 100 | 100 | 0.116 |
| 101 | 101 | 0.366 |
| 102 | 102 | 0.303 |
| 103 | 103 | 0.0917 |
| 104 | 104 | 0.416 |
| 105 | 105 | 0.806 |
| 106 | 106 | 0.453 |
| 107 | 107 | 0.735 |
| 108 | 108 | 0.991 |
| 109 | 109 | 0.0156 |
| 11 | 11 | 0.0179 |
| 110 | 110 | 0.176 |
| 111 | 111 | 0.00727 |
| 112 | 112 | 0.384 |
| 113 | 113 | 0.5 |
| 114 | 114 | 0.0189 |
| 115 | 115 | 0.523 |
| 116 | 116 | 0.313 |
| 117 | 117 | 0.0165 |
| 118 | 118 | 0.111 |
| 119 | 119 | 0.639 |
| 12 | 12 | 0.818 |
| 120 | 120 | 0.246 |
| 121 | 121 | 0.659 |
| 122 | 122 | 0.616 |
| 123 | 123 | 0.0533 |
| 124 | 124 | 0.723 |
| 125 | 125 | 0.021 |
| 126 | 126 | 0.827 |
| 127 | 127 | 0.641 |
| 128 | 128 | 0.677 |
| 129 | 129 | 0.326 |
| 13 | 13 | 0.0467 |
| 130 | 130 | 0.433 |
| 131 | 131 | 0.182 |
| 132 | 132 | 0.401 |
| 133 | 133 | 0.534 |
| 134 | 134 | 0.51 |
| 135 | 135 | 0.758 |
| 136 | 136 | 0.527 |
| 137 | 137 | 0.522 |
| 138 | 138 | 0.551 |
| 139 | 139 | 0.382 |
| 14 | 14 | 0.781 |
| 140 | 140 | 0.413 |
| 141 | 141 | 0.237 |
| 142 | 142 | 0.584 |
| 143 | 143 | 0.0497 |
| 144 | 144 | 0.689 |
| 145 | 145 | 0.337 |
| 146 | 146 | 0.542 |
| 147 | 147 | 0.568 |
| 148 | 148 | 0.0495 |
| 149 | 149 | 0.469 |
| 15 | 15 | 0.0429 |
| 150 | 150 | 0.491 |
| 151 | 151 | 0.72 |
| 152 | 152 | 0.696 |
| 153 | 153 | 0.959 |
| 154 | 154 | 0.534 |
| 155 | 155 | 0.366 |
| 156 | 156 | 0.485 |
| 157 | 157 | 0.677 |
| 158 | 158 | 0.609 |
| 159 | 159 | 0.499 |
| 16 | 16 | 0.0502 |
| 160 | 160 | 0.394 |
| 161 | 161 | 0.202 |
| 162 | 162 | 0.382 |
| 163 | 163 | 0.735 |
| 164 | 164 | 0.0359 |
| 165 | 165 | 0.732 |
| 166 | 166 | 0.913 |
| 167 | 167 | 0.0284 |
| 168 | 168 | 0.878 |
| 169 | 169 | 0.0979 |
| 17 | 17 | 0.498 |
| 18 | 18 | 0.109 |
| 19 | 19 | 0.963 |
| 2 | 2 | 0.432 |
| 20 | 20 | 0.285 |
| 21 | 21 | 0.279 |
| 22 | 22 | 0.967 |
| 23 | 23 | 0.395 |
| 24 | 24 | 0.832 |
| 25 | 25 | 0.316 |
| 26 | 26 | 0.0123 |
| 27 | 27 | 0.664 |
| 28 | 28 | 0.776 |
| 29 | 29 | 0.00469 |
| 3 | 3 | 0.11 |
| 30 | 30 | 0.105 |
| 31 | 31 | 0.737 |
| 32 | 32 | 0.0544 |
| 33 | 33 | 0.142 |
| 34 | 34 | 0.373 |
| 35 | 35 | 0.152 |
| 36 | 36 | 0.0189 |
| 37 | 37 | 0.0919 |
| 38 | 38 | 0.649 |
| 39 | 39 | 0.496 |
| 4 | 4 | 0.235 |
| 40 | 40 | 0.0659 |
| 41 | 41 | 0.34 |
| 42 | 42 | 0.272 |
| 43 | 43 | 0.225 |
| 44 | 44 | 0.0425 |
| 45 | 45 | 0.385 |
| 46 | 46 | 0.024 |
| 47 | 47 | 0.0242 |
| 48 | 48 | 0.0804 |
| 49 | 49 | 0.0705 |
| 5 | 5 | 0.4 |
| 50 | 50 | 0.758 |
| 51 | 51 | 0.408 |
| 52 | 52 | 0.411 |
| 53 | 53 | 0.745 |
| 54 | 54 | 0.996 |
| 55 | 55 | 0.923 |
| 56 | 56 | 0.805 |
| 57 | 57 | 0.167 |
| 58 | 58 | 0.571 |
| 59 | 59 | 0.841 |
| 6 | 6 | 0.672 |
| 60 | 60 | 0.997 |
| 61 | 61 | 0.129 |
| 62 | 62 | 0.365 |
| 63 | 63 | 0.495 |
| 64 | 64 | 0.0765 |
| 65 | 65 | 0.6 |
| 66 | 66 | 0.1 |
| 67 | 67 | 0.723 |
| 68 | 68 | 0.453 |
| 69 | 69 | 0.183 |
| 7 | 7 | 0.227 |
| 70 | 70 | 0.0544 |
| 71 | 71 | 0.0156 |
| 72 | 72 | 0.736 |
| 73 | 73 | 0.218 |
| 74 | 74 | 0.558 |
| 75 | 75 | 0.0265 |
| 76 | 76 | 0.139 |
| 77 | 77 | 0.787 |
| 78 | 78 | 0.0588 |
| 79 | 79 | 0.13 |
| 8 | 8 | 0.0435 |
| 80 | 80 | 0.884 |
| 81 | 81 | 0.234 |
| 82 | 82 | 0.184 |
| 83 | 83 | 0.901 |
| 84 | 84 | 0.827 |
| 85 | 85 | 0.782 |
| 86 | 86 | 0.751 |
| 87 | 87 | 0.0671 |
| 88 | 88 | 0.884 |
| 89 | 89 | 0.22 |
| 9 | 9 | 0.566 |
| 90 | 90 | 0.0813 |
| 91 | 91 | 0.884 |
| 92 | 92 | 0.928 |
| 93 | 93 | 0.0247 |
| 94 | 94 | 0.0776 |
| 95 | 95 | 0.00478 |
| 96 | 96 | 0.288 |
| 97 | 97 | 0.801 |
| 98 | 98 | 0.0753 |
| 99 | 99 | 0.732 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12854
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010204 human vagina - adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000996 (vagina)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0004119 (endoderm-derived structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000077 (mixed endoderm/mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0003975 (internal female genitalia)
0004175 (internal genitalia)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010204 (human vagina - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)
