FFCP PHASE1:Hg19::chr19:5775165..5775199,+: Difference between revisions
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|id=chr19:5775165..5775199,+
|short_description=p4@TMEM146
|description=CAGE_peak_4_at_TMEM146_5end
|association_with_transcript=-53bp_to_ENST00000448307_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=257062 | |EntrezGene=257062 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28598 | |HGNC=28598 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-53bp_to_ENST00000448307_5end | |||
|cluster_id=chr19:5775165..5775199,+ | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_4_at_TMEM146_5end | |||
|id=chr19:5775165..5775199,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.18e-12;29!UBERON:0007297;1.56e-12;2!UBERON:0001041;2.72e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.92e-24!115;UBERON:0002298!8.97e-21!8;UBERON:0001896!1.60e-20!3;UBERON:0005290!1.60e-20!3;UBERON:0010096!1.60e-20!3;UBERON:0003127!5.24e-15!2;UBERON:0000341!5.62e-15!2;UBERON:0002148!1.47e-14!2;UBERON:0009662!1.47e-14!2;UBERON:0001049!4.54e-14!57;UBERON:0005068!4.54e-14!57;UBERON:0006241!4.54e-14!57;UBERON:0007135!4.54e-14!57;UBERON:0004733!8.39e-14!12;UBERON:0002028!8.39e-14!12;UBERON:0007277!8.39e-14!12;UBERON:0002616!1.58e-13!59;UBERON:0004732!9.97e-13!13;UBERON:0002308!6.19e-12!9;UBERON:0000125!6.19e-12!9;UBERON:0000955!4.30e-11!69;UBERON:0006238!4.30e-11!69;UBERON:0003076!5.26e-11!15;UBERON:0003057!5.26e-11!15;UBERON:0001017!1.03e-10!82;UBERON:0003075!2.92e-10!86;UBERON:0007284!2.92e-10!86;UBERON:0005743!4.06e-10!86;UBERON:0000988!5.24e-10!3;UBERON:0006331!5.24e-10!3;UBERON:0002346!1.05e-09!90;UBERON:0000073!5.89e-09!94;UBERON:0001016!5.89e-09!94;UBERON:0001301!1.65e-08!1;UBERON:0002171!1.91e-08!1;UBERON:0006518!1.91e-08!1;UBERON:0008949!1.91e-08!1;UBERON:0000101!1.91e-08!1;UBERON:0002167!1.91e-08!1;UBERON:0002336!6.63e-08!1;UBERON:0001018!6.63e-08!1;UBERON:0002473!6.63e-08!1;UBERON:0005340!6.63e-08!1;UBERON:0002316!6.63e-08!1;UBERON:0003544!6.63e-08!1;UBERON:0001020!6.63e-08!1;UBERON:0005970!6.63e-08!1;UBERON:0002437!6.63e-08!1;UBERON:0001882!1.21e-07!1;UBERON:0005403!1.21e-07!1;UBERON:0000369!2.43e-07!4;UBERON:0002435!2.43e-07!4;UBERON:0000204!2.43e-07!4;UBERON:0010082!2.43e-07!4;UBERON:0000153!3.32e-07!129;UBERON:0007811!3.32e-07!129;UBERON:0005178!8.59e-07!34;UBERON:0002224!8.59e-07!34;UBERON:0002780!8.62e-07!41;UBERON:0001890!8.62e-07!41;UBERON:0006240!8.62e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;2.98e-44;2!UBERON:0001301;1.19e-23;1!UBERON:0002171;1.67e-23;1!UBERON:0006518;1.67e-23;1!UBERON:0008949;1.67e-23;1!UBERON:0000101;1.67e-23;1!UBERON:0002167;1.67e-23;1!UBERON:0000974;1.63e-15;6!UBERON:0003127;1.56e-12;2!UBERON:0002148;3.06e-12;2!UBERON:0006331;3.06e-12;2!UBERON:0009662;3.06e-12;2!UBERON:0002048;9.98e-10;22!UBERON:0000117;9.98e-10;22!UBERON:0000171;9.98e-10;22!UBERON:0000170;9.98e-10;22!UBERON:0006947;8.63e-09;3!UBERON:0004054;8.63e-09;3!UBERON:0005178;8.67e-09;34!UBERON:0002224;8.67e-09;34!UBERON:0000988;1.35e-08;3!UBERON:0005904;6.68e-07;4!UBERON:0005181;9.31e-07;35!UBERON:0000065;9.33e-07;44 | |||
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|short_description=p4@TMEM146 | |||
}} | }} |
Latest revision as of 05:13, 20 September 2015
Short description: | p4@TMEM146 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TMEM146_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | -53bp_to_ENST00000448307_5end |
EntrezGene: | TMEM146 |
HGNC: | 28598 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 1.91e-44 | 2 |
epididymis | 1.07e-23 | 1 |
lower lobe of right lung | 1.67e-23 | 1 |
right lung lobe | 1.67e-23 | 1 |
lower lobe of lung | 1.67e-23 | 1 |
lobe of lung | 1.67e-23 | 1 |
right lung | 1.67e-23 | 1 |
open tracheal system trachea | 1.65e-12 | 2 |
locus ceruleus | 3.62e-12 | 2 |
brainstem nucleus | 3.62e-12 | 2 |
hindbrain nucleus | 3.62e-12 | 2 |
thoracic cavity element | 7.56e-11 | 34 |
thoracic cavity | 7.56e-11 | 34 |
thoracic segment organ | 1.50e-10 | 35 |
respiratory primordium | 9.57e-10 | 38 |
endoderm of foregut | 9.57e-10 | 38 |
neck | 9.65e-10 | 10 |
lung | 9.98e-10 | 22 |
respiratory tube | 9.98e-10 | 22 |
respiration organ | 9.98e-10 | 22 |
pair of lungs | 9.98e-10 | 22 |
lung primordium | 9.98e-10 | 22 |
lung bud | 9.98e-10 | 22 |
adult organism | 2.41e-09 | 114 |
male genital duct | 8.31e-09 | 3 |
internal male genitalia | 8.31e-09 | 3 |
pons | 1.51e-08 | 3 |
thoracic segment of trunk | 3.28e-07 | 52 |
respiratory tract | 5.92e-07 | 54 |
duct of male reproductive system | 6.50e-07 | 4 |