FFCP PHASE1:Hg19::chr19:6362681..6362698,-: Difference between revisions
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|id=chr19:6362681..6362698,-
|short_description=p@chr19:6362681..6362698,-
|description=CAGE_peak_at_chr19:6362681..6362698,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:6362681..6362698,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_at_chr19:6362681..6362698,- | |||
|id=chr19:6362681..6362698,- | |||
|ontology_enrichment_celltype=CL:0000791!1.06e-31!18;CL:0000789!1.06e-31!18;CL:0002420!1.06e-31!18;CL:0002419!1.06e-31!18;CL:0000790!1.06e-31!18;CL:0000084!2.01e-30!25;CL:0000827!2.01e-30!25;CL:0000625!1.83e-20!11;CL:0000838!1.13e-16!52;CL:0000542!3.05e-16!53;CL:0000051!3.05e-16!53;CL:0000624!3.89e-15!6;CL:0002087!1.15e-09!119;CL:0000738!1.43e-08!140;CL:0000898!2.05e-08!3;CL:0000623!3.73e-08!3;CL:0000825!3.73e-08!3;CL:0000842!6.72e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.83e-33;18!CL:0000789;3.83e-33;18!CL:0002419;3.83e-33;18!CL:0000084;2.75e-28;25!CL:0000624;5.46e-26;6!CL:0000625;3.09e-14;11!CL:0000542;1.24e-10;53!CL:0000898;1.29e-09;3!CL:0000226;3.84e-09;3!CL:0000623;3.84e-09;3!CL:0000842;3.84e-09;3!CL:0000895;7.75e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.55e-33,18;CL:0000789,2.55e-33,18;CL:0002420,2.55e-33,18;CL:0002419,2.55e-33,18;CL:0000790,2.55e-33,18;CL:0000084,2.55e-28,25;CL:0000827,2.55e-28,25;CL:0000624,2.13e-26,6;CL:0000838,9.61e-18,52;CL:0000542,2.32e-17,53;CL:0000051,2.32e-17,53;CL:0000625,3.67e-14,11;CL:0000898,1.13e-09,3;CL:0000226,3.69e-09,3;CL:0000623,3.69e-09,3;CL:0000842,3.69e-09,3;CL:0000825,3.69e-09,3;CL:0002087,4.62e-09,115;CL:0000738,2.01e-08,136;CL:0000810,6.37e-08,1;CL:0000895,6.37e-08,1;CL:0002436,6.37e-08,1;CL:0002427,6.37e-08,1;CL:0002428,6.37e-08,1;CL:0002429,6.37e-08,1;CL:0002433,6.37e-08,1;CL:0002431,6.37e-08,1;CL:0002432,6.37e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000790;3.83e-33;18!CL:0000051;1.24e-10;53!CL:0002427;7.75e-08;1!UBERON:0001045;1.79e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.89e-17!15;UBERON:0000179!1.89e-17!15;UBERON:0000463!1.89e-17!15;UBERON:0007023!9.94e-13!115;UBERON:0004177!1.22e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.21e-14;15!UBERON:0000179;1.21e-14;15!UBERON:0000463;1.21e-14;15!UBERON:0002370;3.98e-14;2!UBERON:0005058;3.98e-14;2!UBERON:0009113;3.98e-14;2!UBERON:0002390;2.16e-10;32!UBERON:0002372;1.79e-07;1!UBERON:0001154;1.79e-07;1!UBERON:0001153;1.79e-07;1!UBERON:0009854;1.79e-07;1!UBERON:0001961;1.79e-07;1!UBERON:0001744;1.79e-07;1!UBERON:0001042;1.79e-07;1!UBERON:0001735;1.79e-07;1!UBERON:0002193;4.27e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.04e-15,4;UBERON:0005058,2.04e-15,4;UBERON:0009113,2.04e-15,4;UBERON:0003295,2.04e-15,4;UBERON:0005562,2.04e-15,4;UBERON:0000178,1.31e-14,15;UBERON:0000179,1.31e-14,15;UBERON:0000463,1.31e-14,15;UBERON:0001042,1.77e-10,10;UBERON:0009145,1.77e-10,10;UBERON:0003351,1.92e-10,6;UBERON:0006562,1.55e-09,11;UBERON:0004177,5.13e-09,7;UBERON:0005057,5.13e-09,7;UBERON:0002372,2.63e-07,1;UBERON:0001961,2.63e-07,1;UBERON:0001744,2.63e-07,1;UBERON:0001735,2.63e-07,1;UBERON:0001154,2.80e-07,1;UBERON:0001153,2.80e-07,1;UBERON:0001045,2.80e-07,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.217010870715852,0,0.971680998056939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.180258620683,1.96505381374582,1.85041349099558,0.167186495390678,2.60737813306872,1.4203434172042,0,0.111410456885174,0.883817722424512,0.443067789167242,0.541607727530031,0.25618263945135,0.260118695119756,1.80881695064044,1.65810010671509,1.15921234294021,5.19002971067211,4.0131124213457,4.18142095219907,0.793165398882963,2.68254345521345,0.68725489096526,1.51811815211702,0.95569624297229,3.25541726928209,0,1.05402583354441,0.383959833463255,3.74792179657038,1.4206635122641,1.64225599384209,0.604820229674197,0.802320587350522,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,1.72502059887614,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,0.431428401637234,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0.507447609232169,0,0.569647187174163,2.1440859791201,0.822724546172388,2.59389324477087,0.540031437238115,1.58625035258854,0,0,0,0,0,0.213425530045242,0.318852545457645,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.375935671919414,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,2.64814530327625,3.78655757204733,0,0.0636471582781649,0,0,0,1.14498490124799,0.215166616178029,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | ||
|short_description=p@chr19:6362681..6362698,- | |||
}} | }} |
Latest revision as of 18:05, 27 July 2015
Short description: | p@chr19:6362681..6362698, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:6362681..6362698, - |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.04e-15 | 4 |
hemolymphoid system gland | 2.04e-15 | 4 |
thymic region | 2.04e-15 | 4 |
pharyngeal gland | 2.04e-15 | 4 |
thymus primordium | 2.04e-15 | 4 |
blood | 1.31e-14 | 15 |
haemolymphatic fluid | 1.31e-14 | 15 |
organism substance | 1.31e-14 | 15 |
chordate pharynx | 1.77e-10 | 10 |
pharyngeal region of foregut | 1.77e-10 | 10 |
pharyngeal epithelium | 1.92e-10 | 6 |
pharynx | 1.55e-09 | 11 |
hemopoietic organ | 5.13e-09 | 7 |
immune organ | 5.13e-09 | 7 |
tonsil | 2.63e-07 | 1 |
mucosa-associated lymphoid tissue | 2.63e-07 | 1 |
lymphoid tissue | 2.63e-07 | 1 |
tonsillar ring | 2.63e-07 | 1 |
vermiform appendix | 2.80e-07 | 1 |
caecum | 2.80e-07 | 1 |
midgut | 2.80e-07 | 1 |