FFCP PHASE1:Hg19::chr1:111743221..111743228,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:111743221..111743228,-
|short_description=p10@DENND2D
|description=CAGE_peak_10_at_DENND2D_5end
|association_with_transcript=52bp_to_NM_024901,uc001eak.1_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79961 | |EntrezGene=79961 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26192 | |HGNC=26192 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H6A0 | |UniProt=Q9H6A0 | ||
|association_with_transcript=52bp_to_NM_024901,uc001eak.1_5end | |||
|cluster_id=chr1:111743221..111743228,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_10_at_DENND2D_5end | |||
|id=chr1:111743221..111743228,- | |||
|ontology_enrichment_celltype=CL:0002087!1.60e-29!119;CL:0000791!1.84e-28!18;CL:0000789!1.84e-28!18;CL:0002420!1.84e-28!18;CL:0002419!1.84e-28!18;CL:0000790!1.84e-28!18;CL:0000738!4.99e-27!140;CL:0000084!4.82e-25!25;CL:0000827!4.82e-25!25;CL:0002031!6.89e-24!124;CL:0000037!2.60e-20!172;CL:0000566!2.60e-20!172;CL:0002032!4.98e-19!165;CL:0000837!4.98e-19!165;CL:0000838!1.24e-18!52;CL:0000625!2.15e-18!11;CL:0000988!3.49e-18!182;CL:0000542!4.18e-18!53;CL:0000051!4.18e-18!53;CL:0000624!2.32e-10!6;CL:0000766!2.55e-10!76;CL:0002194!8.13e-10!63;CL:0000576!8.13e-10!63;CL:0000040!8.13e-10!63;CL:0000559!8.13e-10!63;CL:0002057!2.08e-09!42;CL:0002009!2.65e-09!65;CL:0000860!1.98e-08!45;CL:0000839!3.70e-08!70;CL:0000557!5.96e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.19e-51;18!CL:0000789;6.19e-51;18!CL:0002419;6.19e-51;18!CL:0000084;1.50e-35;25!CL:0000625;6.88e-34;11!CL:0000624;1.67e-15;6!CL:0000542;6.42e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.18e-51,18;CL:0000789,2.18e-51,18;CL:0002420,2.18e-51,18;CL:0002419,2.18e-51,18;CL:0000790,2.18e-51,18;CL:0000084,7.17e-36,25;CL:0000827,7.17e-36,25;CL:0000625,3.03e-34,11;CL:0000838,2.40e-17,52;CL:0000542,6.11e-17,53;CL:0000051,6.11e-17,53;CL:0000624,8.92e-16,6;CL:0002087,3.13e-09,115;CL:0000893,5.26e-08,2;CL:0002489,5.26e-08,2;CL:0000809,5.26e-08,2;CL:0000808,5.26e-08,2;CL:0000894,5.26e-08,2;CL:0000806,5.26e-08,2;CL:0000807,5.26e-08,2;CL:0000805,5.26e-08,2;CL:0002425,5.26e-08,2;CL:0000738,5.61e-08,136;CL:0002031,1.01e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;6.19e-51;18!CL:0000051;6.42e-09;53!CL:0002425;3.77e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.54e-17!102;UBERON:0003061!3.54e-17!102;UBERON:0002193!1.29e-16!112;UBERON:0000178!8.73e-12!15;UBERON:0000179!8.73e-12!15;UBERON:0000463!8.73e-12!15;UBERON:0004177!1.60e-08!7;UBERON:0002405!6.03e-08!115;UBERON:0007023!1.33e-07!115;UBERON:0002370!1.71e-07!4;UBERON:0005058!1.71e-07!4;UBERON:0009113!1.71e-07!4;UBERON:0003295!1.71e-07!4;UBERON:0005562!1.71e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.17e-14;15!UBERON:0000179;1.17e-14;15!UBERON:0000463;1.17e-14;15!UBERON:0002390;9.18e-11;32!UBERON:0002370;7.97e-09;2!UBERON:0005058;7.97e-09;2!UBERON:0009113;7.97e-09;2!UBERON:0002193;6.27e-08;42!UBERON:0004177;2.13e-07;5!UBERON:0005057;2.13e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.18e-15,4;UBERON:0005058,4.18e-15,4;UBERON:0009113,4.18e-15,4;UBERON:0003295,4.18e-15,4;UBERON:0005562,4.18e-15,4;UBERON:0000178,8.04e-15,15;UBERON:0000179,8.04e-15,15;UBERON:0000463,8.04e-15,15;UBERON:0004177,4.17e-13,7;UBERON:0005057,4.17e-13,7;UBERON:0003351,4.21e-10,6;UBERON:0001042,3.57e-09,10;UBERON:0009145,3.57e-09,10;UBERON:0006562,2.60e-08,11;UBERON:0002193,9.90e-07,108 | |||
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| ||
|short_description=p10@DENND2D | |||
}} | }} |
Latest revision as of 02:46, 16 September 2015
Short description: | p10@DENND2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_DENND2D_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 52bp_to_NM_024901, uc001eak.1_5end |
EntrezGene: | DENND2D |
HGNC: | 26192 |
UniProt: | Q9H6A0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.18e-51 | 18 |
alpha-beta T cell | 2.18e-51 | 18 |
immature T cell | 2.18e-51 | 18 |
mature T cell | 2.18e-51 | 18 |
immature alpha-beta T cell | 2.18e-51 | 18 |
T cell | 7.17e-36 | 25 |
pro-T cell | 7.17e-36 | 25 |
CD8-positive, alpha-beta T cell | 3.03e-34 | 11 |
lymphoid lineage restricted progenitor cell | 2.40e-17 | 52 |
lymphocyte | 6.11e-17 | 53 |
common lymphoid progenitor | 6.11e-17 | 53 |
CD4-positive, alpha-beta T cell | 8.92e-16 | 6 |
nongranular leukocyte | 3.13e-09 | 115 |
thymocyte | 5.26e-08 | 2 |
double negative thymocyte | 5.26e-08 | 2 |
double-positive, alpha-beta thymocyte | 5.26e-08 | 2 |
DN4 thymocyte | 5.26e-08 | 2 |
DN1 thymic pro-T cell | 5.26e-08 | 2 |
DN2 thymocyte | 5.26e-08 | 2 |
DN3 thymocyte | 5.26e-08 | 2 |
immature single positive thymocyte | 5.26e-08 | 2 |
early T lineage precursor | 5.26e-08 | 2 |
leukocyte | 5.61e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 1.01e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.18e-15 | 4 |
hemolymphoid system gland | 4.18e-15 | 4 |
thymic region | 4.18e-15 | 4 |
pharyngeal gland | 4.18e-15 | 4 |
thymus primordium | 4.18e-15 | 4 |
blood | 8.04e-15 | 15 |
haemolymphatic fluid | 8.04e-15 | 15 |
organism substance | 8.04e-15 | 15 |
hemopoietic organ | 4.17e-13 | 7 |
immune organ | 4.17e-13 | 7 |
pharyngeal epithelium | 4.21e-10 | 6 |
chordate pharynx | 3.57e-09 | 10 |
pharyngeal region of foregut | 3.57e-09 | 10 |
pharynx | 2.60e-08 | 11 |
hemolymphoid system | 9.90e-07 | 108 |