FFCP PHASE1:Hg19::chr10:26986180..26986208,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23590 | |EntrezGene=23590 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17759 | |HGNC=17759 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T2R2 | |UniProt=Q5T2R2 | ||
|association_with_transcript=-379bp_to_ENST00000376215_5end | |association_with_transcript=-379bp_to_ENST00000376215_5end | ||
|cluster_id=chr10:26986180..26986208,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_5_at_PDSS1_5end | |description=CAGE_peak_5_at_PDSS1_5end | ||
|id=chr10:26986180..26986208,+ | |id=chr10:26986180..26986208,+ | ||
|ontology_enrichment_celltype=CL:0000860;1.93e-98;33!CL:0002057;1.93e-98;33!CL:0000473;8.34e-74;39!CL:0000234;8.34e-74;39!CL:0000576;1.20e-53;48!CL:0000766;2.79e-33;69!CL:0002087;1.58e-15;104!CL:0000763;2.21e-15;100!CL:0000738;2.94e-10;136!CL:0002393;2.49e-08;6!CL:0002397;2.49e-08;6!CL:0000988;5.13e-08;177!CL:0000226;2.42e-07;3!CL:0000842;2.42e-07;3 | |ontology_enrichment_celltype=CL:0002057!7.09e-57!42;CL:0000860!4.45e-52!45;CL:0002194!2.30e-51!63;CL:0000576!2.30e-51!63;CL:0000040!2.30e-51!63;CL:0000559!2.30e-51!63;CL:0000766!1.17e-49!76;CL:0002009!2.86e-49!65;CL:0000839!1.47e-44!70;CL:0000557!1.07e-43!71;CL:0000763!6.82e-41!112;CL:0000049!6.82e-41!112;CL:0002087!3.56e-38!119;CL:0000738!2.77e-37!140;CL:0000037!1.03e-36!172;CL:0000566!1.03e-36!172;CL:0002032!3.53e-35!165;CL:0000837!3.53e-35!165;CL:0000988!1.66e-34!182;CL:0002031!8.51e-33!124;CL:0002393!5.21e-08!9;CL:0002397!5.21e-08!9;CL:0000134!3.25e-07!358 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.93e-98;33!CL:0002057;1.93e-98;33!CL:0000473;8.34e-74;39!CL:0000234;8.34e-74;39!CL:0000576;1.20e-53;48!CL:0000766;2.79e-33;69!CL:0002087;1.58e-15;104!CL:0000763;2.21e-15;100!CL:0000738;2.94e-10;136!CL:0002393;2.49e-08;6!CL:0002397;2.49e-08;6!CL:0000988;5.13e-08;177!CL:0000226;2.42e-07;3!CL:0000842;2.42e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.54e-104,42;CL:0002057,3.54e-104,42;CL:0000473,1.40e-96,48;CL:0000234,1.40e-96,48;CL:0002194,2.24e-86,59;CL:0000576,2.24e-86,59;CL:0000040,2.24e-86,59;CL:0000559,2.24e-86,59;CL:0002009,2.23e-83,61;CL:0000839,1.16e-76,66;CL:0000557,1.95e-75,67;CL:0000766,3.00e-74,72;CL:0000763,1.57e-50,108;CL:0000049,1.57e-50,108;CL:0002087,4.28e-47,115;CL:0000738,2.61e-41,136;CL:0002031,1.83e-39,120;CL:0000037,3.11e-34,168;CL:0000988,3.81e-32,177;CL:0002032,9.73e-32,161;CL:0000837,9.73e-32,161;CL:0000134,1.62e-12,354;CL:0002320,3.93e-12,361;CL:0000219,8.89e-11,386;CL:0000034,2.97e-10,441;CL:0000048,4.05e-09,427;CL:0000723,6.87e-09,433;CL:0000226,2.59e-07,3;CL:0000842,2.59e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.21e-76;42!CL:0000049;7.20e-14;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.96e-39!102;UBERON:0003061!5.96e-39!102;UBERON:0002371!6.51e-37!80;UBERON:0002193!3.25e-35!112;UBERON:0001474!3.44e-33!86;UBERON:0002405!5.08e-28!115;UBERON:0004765!7.37e-26!101;UBERON:0001434!7.37e-26!101;UBERON:0003081!4.66e-12!216;UBERON:0002204!4.66e-11!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.63e-66,76;UBERON:0001474,1.33e-60,82;UBERON:0002390,8.46e-60,98;UBERON:0003061,8.46e-60,98;UBERON:0002405,3.93e-56,93;UBERON:0004765,1.09e-54,90;UBERON:0002193,1.11e-53,108;UBERON:0001434,1.31e-48,100;UBERON:0002204,1.59e-26,167;UBERON:0003081,2.02e-25,203;UBERON:0000926,7.14e-14,315;UBERON:0004120,7.14e-14,315;UBERON:0006603,7.14e-14,315;UBERON:0002384,1.31e-11,371 | |||
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| ||
|short_description=p5@PDSS1 | |short_description=p5@PDSS1 | ||
}} | }} |
Latest revision as of 18:22, 17 September 2015
Short description: | p5@PDSS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PDSS1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -379bp_to_ENST00000376215_5end |
EntrezGene: | PDSS1 |
HGNC: | 17759 |
UniProt: | Q5T2R2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.54e-104 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.54e-104 | 42 |
defensive cell | 1.40e-96 | 48 |
phagocyte | 1.40e-96 | 48 |
monopoietic cell | 2.24e-86 | 59 |
monocyte | 2.24e-86 | 59 |
monoblast | 2.24e-86 | 59 |
promonocyte | 2.24e-86 | 59 |
macrophage dendritic cell progenitor | 2.23e-83 | 61 |
myeloid lineage restricted progenitor cell | 1.16e-76 | 66 |
granulocyte monocyte progenitor cell | 1.95e-75 | 67 |
myeloid leukocyte | 3.00e-74 | 72 |
myeloid cell | 1.57e-50 | 108 |
common myeloid progenitor | 1.57e-50 | 108 |
nongranular leukocyte | 4.28e-47 | 115 |
leukocyte | 2.61e-41 | 136 |
hematopoietic lineage restricted progenitor cell | 1.83e-39 | 120 |
hematopoietic stem cell | 3.11e-34 | 168 |
hematopoietic cell | 3.81e-32 | 177 |
hematopoietic oligopotent progenitor cell | 9.73e-32 | 161 |
hematopoietic multipotent progenitor cell | 9.73e-32 | 161 |
mesenchymal cell | 1.62e-12 | 354 |
connective tissue cell | 3.93e-12 | 361 |
motile cell | 8.89e-11 | 386 |
stem cell | 2.97e-10 | 441 |
multi fate stem cell | 4.05e-09 | 427 |
somatic stem cell | 6.87e-09 | 433 |
single nucleate cell | 2.59e-07 | 3 |
mononuclear cell | 2.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.63e-66 | 76 |
bone element | 1.33e-60 | 82 |
hematopoietic system | 8.46e-60 | 98 |
blood island | 8.46e-60 | 98 |
immune system | 3.93e-56 | 93 |
skeletal element | 1.09e-54 | 90 |
hemolymphoid system | 1.11e-53 | 108 |
skeletal system | 1.31e-48 | 100 |
musculoskeletal system | 1.59e-26 | 167 |
lateral plate mesoderm | 2.02e-25 | 203 |
mesoderm | 7.14e-14 | 315 |
mesoderm-derived structure | 7.14e-14 | 315 |
presumptive mesoderm | 7.14e-14 | 315 |
connective tissue | 1.31e-11 | 371 |