FFCP PHASE1:Hg19::chr10:2357481..2357493,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:2357481..2357493,+ | |||
|description=CAGE_peak_at_chr10:2357481..2357493,+ | |description=CAGE_peak_at_chr10:2357481..2357493,+ | ||
|id=chr10:2357481..2357493,+ | |id=chr10:2357481..2357493,+ | ||
|ontology_enrichment_celltype=CL:0000167;8.34e-34;1!CL:0000164;8.34e-34;1!CL:0000502;8.34e-34;1!CL:0000172;8.34e-34;1!CL:0000173;8.34e-34;1!CL:0002253;5.96e-18;2!CL:0000054;1.17e-17;2!CL:0000137;1.17e-17;2!CL:0000092;1.17e-17;2!CL:0002178;2.45e-12;3!CL:0002563;1.17e-09;4!CL:0002251;1.25e-07;20 | |ontology_enrichment_celltype=CL:0002251!9.00e-11!21;CL:0000167!9.84e-11!1;CL:0000164!9.84e-11!1;CL:0000502!9.84e-11!1;CL:0000172!9.84e-11!1;CL:0000173!9.84e-11!1;CL:0002351!9.84e-11!1;CL:0002563!2.62e-10!4;CL:0002336!3.96e-10!1;CL:0002261!3.96e-10!1;CL:0002170!3.96e-10!1 | ||
| | |ontology_enrichment_celltype_v019=CL:0000167;8.34e-34;1!CL:0000164;8.34e-34;1!CL:0000502;8.34e-34;1!CL:0000172;8.34e-34;1!CL:0000173;8.34e-34;1!CL:0002253;5.96e-18;2!CL:0000054;1.17e-17;2!CL:0000137;1.17e-17;2!CL:0000092;1.17e-17;2!CL:0002178;2.45e-12;3!CL:0002563;1.17e-09;4!CL:0002251;1.25e-07;20 | ||
|ontology_enrichment_disease=DOID:0060085;8.34e-34;1!DOID:3165;8.34e-34;1!DOID:0060121;8.34e-34;1!DOID:2438;8.34e-34;1!DOID:4418;8.34e-34;1!DOID:4430;8.34e-34;1!DOID:3493;8.34e-18;2!DOID:200;1.17e-17;2!DOID:4305;1.17e-17;2!DOID:3119;1.72e-10;14!DOID:0060072;1.63e-09;4!DOID:4362;5.54e-08;5!DOID:201;9.23e-07;6!DOID:0060100;9.23e-07;6!DOID:169;9.23e-07;6 | |ontology_enrichment_celltype_v019_2=CL:0000167,7.06e-34,1;CL:0000164,7.06e-34,1;CL:0000502,7.06e-34,1;CL:0000172,7.06e-34,1;CL:0000173,7.06e-34,1;CL:0002351,7.06e-34,1;CL:0002253,6.48e-18,2;CL:0000054,1.27e-17,2;CL:0000137,1.27e-17,2;CL:0000092,1.27e-17,2;CL:0002178,2.59e-12,3;CL:0002563,1.22e-09,4;CL:0002251,1.29e-07,20 | ||
|ontology_enrichment_uberon=UBERON:0001052;1.17e-09;4!UBERON:0001242;1.17e-09;4!UBERON:0001262;1.17e-09;4!UBERON:0004786;1.17e-09;4!UBERON:0004808;1.17e-09;4!UBERON:0001277;1.17e-09;4!UBERON:0000014;1.63e-09;4!UBERON:0004907;5.54e-08;5!UBERON:0000945;6.34e-08;5!UBERON:0010039;6.34e-08;5!UBERON:0000002;7.37e-07;6!UBERON:0001560;7.37e-07;6!UBERON:0005910;8.25e-07;6!UBERON:0005409;9.39e-07;22 | |ontology_enrichment_development_v019=CL:0002351;8.34e-34;1 | ||
|ontology_enrichment_disease=DOID:4430!9.84e-11!1;DOID:0060085!1.08e-10!1;DOID:3165!1.08e-10!1;DOID:0060121!1.08e-10!1;DOID:2438!1.08e-10!1;DOID:4418!1.08e-10!1;DOID:3347!1.19e-10!1;DOID:0050619!1.30e-10!1;DOID:1357!1.30e-10!1;DOID:201!4.00e-07!6;DOID:0060100!4.00e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:0060085;8.34e-34;1!DOID:3165;8.34e-34;1!DOID:0060121;8.34e-34;1!DOID:2438;8.34e-34;1!DOID:4418;8.34e-34;1!DOID:4430;8.34e-34;1!DOID:3493;8.34e-18;2!DOID:200;1.17e-17;2!DOID:4305;1.17e-17;2!DOID:3119;1.72e-10;14!DOID:0060072;1.63e-09;4!DOID:4362;5.54e-08;5!DOID:201;9.23e-07;6!DOID:0060100;9.23e-07;6!DOID:169;9.23e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,7.06e-34,1;DOID:0060085,9.85e-34,1;DOID:3165,9.85e-34,1;DOID:0060121,9.85e-34,1;DOID:2438,9.85e-34,1;DOID:4418,9.85e-34,1;DOID:3493,9.07e-18,2;DOID:200,1.27e-17,2;DOID:4305,1.27e-17,2;DOID:3119,1.81e-10,14;DOID:0060072,1.70e-09,4;DOID:4362,5.35e-08,5;DOID:169,8.97e-07,6;DOID:201,9.49e-07,6;DOID:0060100,9.49e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000344!2.45e-12!12;UBERON:0001764!1.30e-10!1;UBERON:0001825!1.30e-10!1;UBERON:0001282!1.57e-10!1;UBERON:0009842!1.57e-10!1;UBERON:0003704!1.57e-10!1;UBERON:0001171!1.57e-10!1;UBERON:0001172!1.57e-10!1;UBERON:0001242!2.62e-10!4;UBERON:0001262!2.62e-10!4;UBERON:0004786!2.62e-10!4;UBERON:0004808!2.62e-10!4;UBERON:0001277!2.62e-10!4;UBERON:0003350!2.04e-08!5;UBERON:0003729!5.41e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.17e-09;4!UBERON:0001242;1.17e-09;4!UBERON:0001262;1.17e-09;4!UBERON:0004786;1.17e-09;4!UBERON:0004808;1.17e-09;4!UBERON:0001277;1.17e-09;4!UBERON:0000014;1.63e-09;4!UBERON:0004907;5.54e-08;5!UBERON:0000945;6.34e-08;5!UBERON:0010039;6.34e-08;5!UBERON:0000002;7.37e-07;6!UBERON:0001560;7.37e-07;6!UBERON:0005910;8.25e-07;6!UBERON:0005409;9.39e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.22e-09,4;UBERON:0001242,1.22e-09,4;UBERON:0001262,1.22e-09,4;UBERON:0004786,1.22e-09,4;UBERON:0004808,1.22e-09,4;UBERON:0001277,1.22e-09,4;UBERON:0000014,1.70e-09,4;UBERON:0004907,5.73e-08,5;UBERON:0000002,7.17e-07,6;UBERON:0001560,7.17e-07,6;UBERON:0005910,8.02e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79329239483557,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.760550074326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39100228192093,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0611549059201,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,1.41405928260976,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,2.88163833869832,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79329239483557,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.760550074326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39100228192093,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0611549059201,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,1.41405928260976,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,2.88163833869832,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:2357481..2357493,+ | |short_description=p@chr10:2357481..2357493,+ | ||
}} | }} |
Latest revision as of 12:39, 23 July 2015
Short description: | p@chr10:2357481..2357493, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:2357481..2357493, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 7.06e-34 | 1 |
enteroendocrine cell | 7.06e-34 | 1 |
type D enteroendocrine cell | 7.06e-34 | 1 |
somatostatin secreting cell | 7.06e-34 | 1 |
pancreatic D cell | 7.06e-34 | 1 |
progenitor cell of endocrine pancreas | 7.06e-34 | 1 |
epithelial cell of large intestine | 6.48e-18 | 2 |
bone matrix secreting cell | 1.27e-17 | 2 |
osteocyte | 1.27e-17 | 2 |
osteoclast | 1.27e-17 | 2 |
epithelial cell of stomach | 2.59e-12 | 3 |
intestinal epithelial cell | 1.22e-09 | 4 |
epithelial cell of alimentary canal | 1.29e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.22e-09 | 4 |
intestinal mucosa | 1.22e-09 | 4 |
wall of intestine | 1.22e-09 | 4 |
gastrointestinal system mucosa | 1.22e-09 | 4 |
gastrointestinal system epithelium | 1.22e-09 | 4 |
intestinal epithelium | 1.22e-09 | 4 |
zone of skin | 1.70e-09 | 4 |
lower digestive tract | 5.73e-08 | 5 |
uterine cervix | 7.17e-07 | 6 |
neck of organ | 7.17e-07 | 6 |
transitional epithelium | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 7.06e-34 | 1 |
organ system benign neoplasm | 9.85e-34 | 1 |
skin benign neoplasm | 9.85e-34 | 1 |
integumentary system benign neoplasm | 9.85e-34 | 1 |
dermis tumor | 9.85e-34 | 1 |
cutaneous fibrous histiocytoma | 9.85e-34 | 1 |
signet ring cell adenocarcinoma | 9.07e-18 | 2 |
giant cell tumor | 1.27e-17 | 2 |
bone giant cell tumor | 1.27e-17 | 2 |
gastrointestinal system cancer | 1.81e-10 | 14 |
benign neoplasm | 1.70e-09 | 4 |
cervical cancer | 5.35e-08 | 5 |
neuroendocrine tumor | 8.97e-07 | 6 |
connective tissue cancer | 9.49e-07 | 6 |
musculoskeletal system cancer | 9.49e-07 | 6 |