FFCP PHASE1:Hg19::chr14:50571781..50571823,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:50571781..50571823,- | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_at_chr14:50571781..50571823,- | |description=CAGE_peak_at_chr14:50571781..50571823,- | ||
|id=chr14:50571781..50571823,- | |id=chr14:50571781..50571823,- | ||
|ontology_enrichment_celltype=CL:0000236;4.82e-33;13!CL:0000542;2.23e-31;53!CL:0000791;1.11e-24;18!CL:0000789;1.11e-24;18!CL:0002419;1.11e-24;18!CL:0000625;1.36e-23;11!CL:0000084;3.35e-23;25!CL:0000945;1.06e-16;24!CL:0000623;2.34e-11;3!CL:0000226;7.17e-11;3!CL:0000842;7.17e-11;3!CL:0002087;8.14e-08;104 | |ontology_enrichment_celltype=CL:0000838!1.23e-37!52;CL:0000542!1.27e-36!53;CL:0000051!1.27e-36!53;CL:0000791!3.32e-22!18;CL:0000789!3.32e-22!18;CL:0002420!3.32e-22!18;CL:0002419!3.32e-22!18;CL:0000790!3.32e-22!18;CL:0000738!1.79e-20!140;CL:0000084!8.75e-20!25;CL:0000827!8.75e-20!25;CL:0002087!4.69e-19!119;CL:0002031!3.35e-16!124;CL:0000945!3.25e-15!24;CL:0000826!3.25e-15!24;CL:0000625!8.92e-15!11;CL:0000236!1.65e-14!14;CL:0000037!9.56e-14!172;CL:0000566!9.56e-14!172;CL:0002032!4.49e-12!165;CL:0000837!4.49e-12!165;CL:0000988!5.39e-12!182;CL:0000624!3.25e-08!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0000236;4.82e-33;13!CL:0000542;2.23e-31;53!CL:0000791;1.11e-24;18!CL:0000789;1.11e-24;18!CL:0002419;1.11e-24;18!CL:0000625;1.36e-23;11!CL:0000084;3.35e-23;25!CL:0000945;1.06e-16;24!CL:0000623;2.34e-11;3!CL:0000226;7.17e-11;3!CL:0000842;7.17e-11;3!CL:0002087;8.14e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.43e-46,52;CL:0000542,2.53e-45,53;CL:0000051,2.53e-45,53;CL:0000236,1.67e-30,14;CL:0000791,7.90e-25,18;CL:0000789,7.90e-25,18;CL:0002420,7.90e-25,18;CL:0002419,7.90e-25,18;CL:0000790,7.90e-25,18;CL:0000625,7.63e-24,11;CL:0000084,3.56e-23,25;CL:0000827,3.56e-23,25;CL:0002087,7.20e-23,115;CL:0000738,1.74e-22,136;CL:0002031,4.89e-17,120;CL:0000945,1.05e-16,24;CL:0000826,1.05e-16,24;CL:0000037,1.46e-16,168;CL:0000988,2.74e-15,177;CL:0002032,4.97e-14,161;CL:0000837,4.97e-14,161;CL:0000623,1.98e-11,3;CL:0000825,1.98e-11,3;CL:0000226,7.32e-11,3;CL:0000842,7.32e-11,3 | |||
|ontology_enrichment_development_v019=CL:0000051;2.23e-31;53!CL:0000790;1.11e-24;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004177;1.88e-10;5!UBERON:0005057;1.88e-10;5!UBERON:0000178;3.08e-10;15!UBERON:0000179;3.08e-10;15!UBERON:0000463;3.08e-10;15!UBERON:0002390;2.12e-09;32!UBERON:0002370;2.36e-07;2!UBERON:0005058;2.36e-07;2!UBERON:0009113;2.36e-07;2 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.53e-09!115;UBERON:0004177!5.49e-09!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;1.88e-10;5!UBERON:0005057;1.88e-10;5!UBERON:0000178;3.08e-10;15!UBERON:0000179;3.08e-10;15!UBERON:0000463;3.08e-10;15!UBERON:0002390;2.12e-09;32!UBERON:0002370;2.36e-07;2!UBERON:0005058;2.36e-07;2!UBERON:0009113;2.36e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.29e-11,7;UBERON:0005057,2.29e-11,7;UBERON:0000178,3.38e-10,15;UBERON:0000179,3.38e-10,15;UBERON:0000463,3.38e-10,15;UBERON:0002370,9.54e-08,4;UBERON:0005058,9.54e-08,4;UBERON:0009113,9.54e-08,4;UBERON:0003295,9.54e-08,4;UBERON:0005562,9.54e-08,4 | |||
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|short_description=p@chr14:50571781..50571823,- | |short_description=p@chr14:50571781..50571823,- | ||
}} | }} |
Latest revision as of 20:53, 24 July 2015
Short description: | p@chr14:50571781..50571823, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:50571781..50571823, - |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.43e-46 | 52 |
lymphocyte | 2.53e-45 | 53 |
common lymphoid progenitor | 2.53e-45 | 53 |
B cell | 1.67e-30 | 14 |
mature alpha-beta T cell | 7.90e-25 | 18 |
alpha-beta T cell | 7.90e-25 | 18 |
immature T cell | 7.90e-25 | 18 |
mature T cell | 7.90e-25 | 18 |
immature alpha-beta T cell | 7.90e-25 | 18 |
CD8-positive, alpha-beta T cell | 7.63e-24 | 11 |
T cell | 3.56e-23 | 25 |
pro-T cell | 3.56e-23 | 25 |
nongranular leukocyte | 7.20e-23 | 115 |
leukocyte | 1.74e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 4.89e-17 | 120 |
lymphocyte of B lineage | 1.05e-16 | 24 |
pro-B cell | 1.05e-16 | 24 |
hematopoietic stem cell | 1.46e-16 | 168 |
hematopoietic cell | 2.74e-15 | 177 |
hematopoietic oligopotent progenitor cell | 4.97e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.97e-14 | 161 |
natural killer cell | 1.98e-11 | 3 |
pro-NK cell | 1.98e-11 | 3 |
single nucleate cell | 7.32e-11 | 3 |
mononuclear cell | 7.32e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.29e-11 | 7 |
immune organ | 2.29e-11 | 7 |
blood | 3.38e-10 | 15 |
haemolymphatic fluid | 3.38e-10 | 15 |
organism substance | 3.38e-10 | 15 |
thymus | 9.54e-08 | 4 |
hemolymphoid system gland | 9.54e-08 | 4 |
thymic region | 9.54e-08 | 4 |
pharyngeal gland | 9.54e-08 | 4 |
thymus primordium | 9.54e-08 | 4 |