FFCP PHASE1:Hg19::chr10:29976515..29976528,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:29976515..29976528,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr10:29976515..29976528,- | |description=CAGE_peak_at_chr10:29976515..29976528,- | ||
|id=chr10:29976515..29976528,- | |id=chr10:29976515..29976528,- | ||
|ontology_enrichment_celltype=CL:0000860;3.97e-43;33!CL:0002057;3.97e-43;33!CL:0000576;9.16e-37;48!CL:0000766;9.42e-35;69!CL:0000473;2.88e-34;39!CL:0000234;2.88e-34;39!CL:0000094;2.51e-32;8!CL:0000081;3.96e-23;11!CL:0002393;8.81e-17;6!CL:0002397;8.81e-17;6!CL:0000763;1.27e-14;100!CL:0000775;3.56e-13;3!CL:0000767;6.38e-13;3!CL:0000875;1.07e-12;3!CL:0002396;1.07e-12;3!CL:0002087;5.16e-10;104!CL:0000771;9.92e-10;2!CL:0000738;1.37e-09;136 | |ontology_enrichment_celltype=CL:0002057!2.50e-77!42;CL:0000860!2.28e-71!45;CL:0000766!3.70e-69!76;CL:0002194!1.35e-57!63;CL:0000576!1.35e-57!63;CL:0000040!1.35e-57!63;CL:0000559!1.35e-57!63;CL:0002009!1.84e-55!65;CL:0000839!1.20e-50!70;CL:0000557!9.11e-50!71;CL:0000763!2.99e-46!112;CL:0000049!2.99e-46!112;CL:0000738!1.05e-45!140;CL:0002087!5.15e-39!119;CL:0000037!4.05e-37!172;CL:0000566!4.05e-37!172;CL:0002032!8.78e-35!165;CL:0000837!8.78e-35!165;CL:0000988!3.51e-34!182;CL:0002031!6.58e-32!124;CL:0002393!1.68e-21!9;CL:0002397!1.68e-21!9;CL:0000094!2.54e-20!8;CL:0000081!2.69e-14!11;CL:0000134!1.18e-09!358;CL:0002320!3.46e-09!365;CL:0000775!1.13e-08!3;CL:0000767!1.75e-08!3;CL:0000875!2.24e-08!3;CL:0002396!2.24e-08!3;CL:0000219!1.45e-07!390;CL:0000842!2.71e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;3.97e-43;33!CL:0002057;3.97e-43;33!CL:0000576;9.16e-37;48!CL:0000766;9.42e-35;69!CL:0000473;2.88e-34;39!CL:0000234;2.88e-34;39!CL:0000094;2.51e-32;8!CL:0000081;3.96e-23;11!CL:0002393;8.81e-17;6!CL:0002397;8.81e-17;6!CL:0000763;1.27e-14;100!CL:0000775;3.56e-13;3!CL:0000767;6.38e-13;3!CL:0000875;1.07e-12;3!CL:0002396;1.07e-12;3!CL:0002087;5.16e-10;104!CL:0000771;9.92e-10;2!CL:0000738;1.37e-09;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.93e-74,72;CL:0000860,1.09e-71,42;CL:0002057,1.09e-71,42;CL:0000473,3.11e-66,48;CL:0000234,3.11e-66,48;CL:0002194,4.00e-55,59;CL:0000576,4.00e-55,59;CL:0000040,4.00e-55,59;CL:0000559,4.00e-55,59;CL:0002009,4.23e-53,61;CL:0000763,3.75e-49,108;CL:0000049,3.75e-49,108;CL:0000839,1.44e-48,66;CL:0000557,9.67e-48,67;CL:0000738,3.04e-37,136;CL:0000094,2.14e-32,8;CL:0000037,3.88e-30,168;CL:0002032,4.42e-30,161;CL:0000837,4.42e-30,161;CL:0000988,3.82e-28,177;CL:0002393,1.21e-27,9;CL:0002397,1.21e-27,9;CL:0002087,1.12e-26,115;CL:0002031,1.65e-23,120;CL:0000081,3.53e-23,11;CL:0000775,3.09e-13,3;CL:0000767,6.39e-13,3;CL:0000875,9.53e-13,3;CL:0002396,9.53e-13,3;CL:0000771,9.72e-10,2;CL:0000134,1.62e-09,354;CL:0002320,3.71e-09,361;CL:0000219,6.78e-08,386;CL:0000034,5.04e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.18e-50;42!CL:0000049;6.97e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000178;1.54e-19;15!UBERON:0000179;1.54e-19;15!UBERON:0000463;1.54e-19;15!UBERON:0002390;5.20e-08;32 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.09e-58!102;UBERON:0003061!2.09e-58!102;UBERON:0002193!7.71e-52!112;UBERON:0002371!8.11e-43!80;UBERON:0001474!5.45e-39!86;UBERON:0004765!2.07e-31!101;UBERON:0001434!2.07e-31!101;UBERON:0002405!5.11e-29!115;UBERON:0003081!1.41e-21!216;UBERON:0000178!2.00e-17!15;UBERON:0000179!2.00e-17!15;UBERON:0000463!2.00e-17!15;UBERON:0002204!3.87e-17!167;UBERON:0002384!1.48e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.54e-19;15!UBERON:0000179;1.54e-19;15!UBERON:0000463;1.54e-19;15!UBERON:0002390;5.20e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.76e-54,98;UBERON:0003061,2.76e-54,98;UBERON:0002193,1.80e-48,108;UBERON:0002371,2.86e-41,76;UBERON:0001474,9.79e-38,82;UBERON:0004765,9.47e-34,90;UBERON:0002405,1.98e-32,93;UBERON:0001434,1.17e-29,100;UBERON:0003081,1.17e-21,203;UBERON:0000178,1.55e-19,15;UBERON:0000179,1.55e-19,15;UBERON:0000463,1.55e-19,15;UBERON:0002204,7.40e-15,167;UBERON:0000926,8.76e-11,315;UBERON:0004120,8.76e-11,315;UBERON:0006603,8.76e-11,315;UBERON:0002384,1.14e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.68719270643137,4.98978217526377,2.32224184974114,0,0,0,0,0,0,11.0799081706375,4.8130667392834,4.55722828503289,0,0,0,1.45398238779565,0.377875943688809,1.4555043671269,2.32429036905685,2.05583944010913,4.64559556342655,0.28769239232215,0.256160706529101,0,2.75796544589295,1.93645405075148,6.77132432971709,1.31769637679823,0.272906150057846,2.02251136000576,6.12167784741805,0.962787081228281,2.55734850319616,0.659702600373432,0.398927315243264,0,5.22376629531451,1.70215567407342,3.11411124497787,0.251248665256743,0,1.08594422352558,5.44859552370032,4.05105399586321,5.37986058649504,1.47878700418359,3.4016687994407,0.838634582033504,1.23561494261145,1.35159203557356,0.803627933485401,3.13514018115373,3.58050018958362,3.65328307529268,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,0,0,1.32171328579026,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0.649094787309367,1.21890816109487,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7670626154095,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17002132569619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,9.73709131131337,2.99161459204025,19.4775291314937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.431428401637234,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04468565539302,3.0585488285695,3.41788312304498,1.90585420366231,3.29089818468955,3.8908398671563,3.7802200606668,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03051603426729,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,2.89967338743037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.68719270643137,4.98978217526377,2.32224184974114,0,0,0,0,0,0,11.0799081706375,4.8130667392834,4.55722828503289,0,0,0,1.45398238779565,0.377875943688809,1.4555043671269,2.32429036905685,2.05583944010913,4.64559556342655,0.28769239232215,0.256160706529101,0,2.75796544589295,1.93645405075148,6.77132432971709,1.31769637679823,0.272906150057846,2.02251136000576,6.12167784741805,0.962787081228281,2.55734850319616,0.659702600373432,0.398927315243264,0,5.22376629531451,1.70215567407342,3.11411124497787,0.251248665256743,0,1.08594422352558,5.44859552370032,4.05105399586321,5.37986058649504,1.47878700418359,3.4016687994407,0.838634582033504,1.23561494261145,1.35159203557356,0.803627933485401,3.13514018115373,3.58050018958362,3.65328307529268,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,0,0,1.32171328579026,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0.649094787309367,1.21890816109487,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7670626154095,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17002132569619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,9.73709131131337,2.99161459204025,19.4775291314937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.431428401637234,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04468565539302,3.0585488285695,3.41788312304498,1.90585420366231,3.29089818468955,3.8908398671563,3.7802200606668,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03051603426729,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,2.89967338743037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:29976515..29976528,- | |short_description=p@chr10:29976515..29976528,- | ||
}} | }} |
Latest revision as of 13:04, 23 July 2015
Short description: | p@chr10:29976515..29976528, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:29976515..29976528, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.76e-54 | 98 |
blood island | 2.76e-54 | 98 |
hemolymphoid system | 1.80e-48 | 108 |
bone marrow | 2.86e-41 | 76 |
bone element | 9.79e-38 | 82 |
skeletal element | 9.47e-34 | 90 |
immune system | 1.98e-32 | 93 |
skeletal system | 1.17e-29 | 100 |
lateral plate mesoderm | 1.17e-21 | 203 |
blood | 1.55e-19 | 15 |
haemolymphatic fluid | 1.55e-19 | 15 |
organism substance | 1.55e-19 | 15 |
musculoskeletal system | 7.40e-15 | 167 |
mesoderm | 8.76e-11 | 315 |
mesoderm-derived structure | 8.76e-11 | 315 |
presumptive mesoderm | 8.76e-11 | 315 |
connective tissue | 1.14e-08 | 371 |