FFCP PHASE1:Hg19::chr12:65146717..65146754,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2799 | |EntrezGene=2799 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4422 | |HGNC=4422 | ||
|TSSclassifier=strong | |||
|UniProt=F5H4C6 | |UniProt=F5H4C6 | ||
|association_with_transcript=0bp_to_ENST00000545273_5end | |association_with_transcript=0bp_to_ENST00000545273_5end | ||
|cluster_id=chr12:65146717..65146754,- | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_4_at_GNS_5end | |description=CAGE_peak_4_at_GNS_5end | ||
|id=chr12:65146717..65146754,- | |id=chr12:65146717..65146754,- | ||
|ontology_enrichment_celltype=CL:0000097;2.97e-66;5!CL:0000163;6.45e-37;9!CL:0002591;2.75e-14;1!CL:0000763;3.00e-09;100!CL:0000151;1.39e-08;36 | |ontology_enrichment_celltype=CL:0000763!2.10e-15!112;CL:0000049!2.10e-15!112;CL:0002274!4.23e-14!5;CL:0000457!4.23e-14!5;CL:0002191!4.23e-14!5;CL:0000097!4.23e-14!5;CL:0000831!4.23e-14!5;CL:0002028!4.23e-14!5;CL:0000839!2.28e-12!70;CL:0000766!7.89e-10!76;CL:0000557!1.01e-09!71;CL:0002032!1.75e-08!165;CL:0000837!1.75e-08!165;CL:0000037!1.93e-08!172;CL:0000566!1.93e-08!172;CL:0002139!4.93e-08!24;CL:0000163!1.39e-07!9;CL:0000988!1.60e-07!182 | ||
| | |ontology_enrichment_celltype_v019=CL:0000097;2.97e-66;5!CL:0000163;6.45e-37;9!CL:0002591;2.75e-14;1!CL:0000763;3.00e-09;100!CL:0000151;1.39e-08;36 | ||
|ontology_enrichment_disease=DOID:8692;5.50e-20;31!DOID:1036;1.10e-15;8!DOID:8552;1.61e-14;1!DOID:1240;1.42e-12;39!DOID:2531;6.08e-07;51!DOID:0060083;6.08e-07;51 | |ontology_enrichment_celltype_v019_2=CL:0000097,2.78e-66,5;CL:0002028,2.78e-66,5;CL:0000163,6.21e-37,9;CL:0000763,3.99e-19,108;CL:0000049,3.99e-19,108;CL:0002591,3.15e-14,1;CL:0002032,2.18e-12,161;CL:0000837,2.18e-12,161;CL:0000037,8.21e-12,168;CL:0000988,3.89e-11,177;CL:0000151,2.97e-09,36;CL:0000839,7.69e-07,66;CL:0000557,9.82e-07,67 | ||
|ontology_enrichment_uberon=UBERON:0000078;8.60e-08;2!UBERON:0002012;8.60e-08;2!UBERON:0008886;8.60e-08;2 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;5.50e-20;31!DOID:1036;1.10e-15;8!DOID:8552;1.61e-14;1!DOID:1240;1.42e-12;39!DOID:2531;6.08e-07;51!DOID:0060083;6.08e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.03e-20,31;DOID:1240,3.90e-16,39;DOID:1036,1.10e-15,8;DOID:8552,1.84e-14,1;DOID:2531,3.22e-12,51;DOID:0060083,3.22e-12,51 | |||
|ontology_enrichment_uberon=UBERON:0002371!4.59e-08!80;UBERON:0002193!9.75e-08!112;UBERON:0001474!3.66e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;8.60e-08;2!UBERON:0002012;8.60e-08;2!UBERON:0008886;8.60e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,9.19e-08,2;UBERON:0007497,9.19e-08,2;UBERON:0003643,9.19e-08,2;UBERON:0003504,9.19e-08,2;UBERON:0003469,9.19e-08,2;UBERON:0003496,9.19e-08,2;UBERON:0002012,9.19e-08,2;UBERON:0008886,9.19e-08,2;UBERON:0007303,9.19e-08,2;UBERON:0002061,9.19e-08,2;UBERON:0005432,9.19e-08,2;UBERON:0004363,9.19e-08,2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0.258416759169329,0.35576626268671,0,0,0.760272105718513,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,77.3481283496631,35.4835189073301,2.48793738648926,4.32359860250884,1.76739406796932,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.199945982364114,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90506224451495,0,0,0,0,0,0,0,0,0,4.80907482658071,0,0,0,0,2.78406173895242,0,0.270455678475983,0.33307196799782,0,0.18714054040822,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0,10.6359429802241,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,2.35470384592537,2.32696354660219,0,0,0,0,7.4700192120778,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6945612141317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.454947352624943,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0.414706207840855,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@GNS | |short_description=p4@GNS | ||
}} | }} |
Latest revision as of 21:35, 19 September 2015
Short description: | p4@GNS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GNS_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000545273_5end |
EntrezGene: | GNS |
HGNC: | 4422 |
UniProt: | F5H4C6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.78e-66 | 5 |
basophil mast progenitor cell | 2.78e-66 | 5 |
endocrine cell | 6.21e-37 | 9 |
myeloid cell | 3.99e-19 | 108 |
common myeloid progenitor | 3.99e-19 | 108 |
smooth muscle cell of the pulmonary artery | 3.15e-14 | 1 |
hematopoietic oligopotent progenitor cell | 2.18e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.18e-12 | 161 |
hematopoietic stem cell | 8.21e-12 | 168 |
hematopoietic cell | 3.89e-11 | 177 |
secretory cell | 2.97e-09 | 36 |
myeloid lineage restricted progenitor cell | 7.69e-07 | 66 |
granulocyte monocyte progenitor cell | 9.82e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 9.19e-08 | 2 |
developing epithelial placode | 9.19e-08 | 2 |
respiratory system arterial blood vessel | 9.19e-08 | 2 |
respiratory system blood vessel | 9.19e-08 | 2 |
respiratory system artery | 9.19e-08 | 2 |
head blood vessel | 9.19e-08 | 2 |
pulmonary artery | 9.19e-08 | 2 |
pulmonary vascular system | 9.19e-08 | 2 |
pharyngeal vasculature | 9.19e-08 | 2 |
truncus arteriosus | 9.19e-08 | 2 |
aortic sac | 9.19e-08 | 2 |
pharyngeal arch artery | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.03e-20 | 31 |
leukemia | 3.90e-16 | 39 |
chronic leukemia | 1.10e-15 | 8 |
chronic myeloid leukemia | 1.84e-14 | 1 |
hematologic cancer | 3.22e-12 | 51 |
immune system cancer | 3.22e-12 | 51 |