FFCP PHASE1:Hg19::chr6:7541832..7541844,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1832 | |EntrezGene=1832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3052 | |HGNC=3052 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000418664_5end | |association_with_transcript=-5bp_to_ENST00000418664_5end | ||
|cluster_id=chr6:7541832..7541844,+ | |||
|coexpression_cluster_id=C4626 | |coexpression_cluster_id=C4626 | ||
|description=CAGE_peak_3_at_DSP_5end | |description=CAGE_peak_3_at_DSP_5end | ||
|id=chr6:7541832..7541844,+ | |id=chr6:7541832..7541844,+ | ||
|ontology_enrichment_celltype=CL:0002076;9.49e-15;42!CL:0002251;4.63e-12;20!CL:0002368;5.10e-07;13 | |ontology_enrichment_celltype=CL:0000066!7.90e-30!254;CL:0000223!3.44e-17!59;CL:0002076!1.59e-15!43;CL:0002251!1.03e-09!21 | ||
| | |ontology_enrichment_celltype_v019=CL:0002076;9.49e-15;42!CL:0002251;4.63e-12;20!CL:0002368;5.10e-07;13 | ||
|ontology_enrichment_disease=DOID:299;9.40e-08;25!DOID:305;4.35e-07;106 | |ontology_enrichment_celltype_v019_2=CL:0000066,3.39e-28,253;CL:0000223,1.70e-20,58;CL:0002076,5.40e-19,42;CL:0002251,5.28e-12,20;CL:0002368,6.46e-07,13;CL:0000349,9.06e-07,19 | ||
|ontology_enrichment_uberon=UBERON:0004921;1.19e-10;33!UBERON:0001041;7.07e-08;14!UBERON:0000065;2.46e-07;44!UBERON:0002365;2.94e-07;31!UBERON:0002330;2.94e-07;31!UBERON:0005409;3.74e-07;22!UBERON:0001555;6.82e-07;54!UBERON:0001004;7.59e-07;65 | |ontology_enrichment_development_v019=CL:0000223;3.04e-11;58!UBERON:0006595;2.09e-08;86 | ||
|ontology_enrichment_disease=DOID:305!1.16e-19!106;DOID:0050687!2.62e-12!143 | |||
|ontology_enrichment_disease_v019=DOID:299;9.40e-08;25!DOID:305;4.35e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.72e-18,106;DOID:0050687,2.33e-12,143;DOID:299,1.29e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.89e-23!169;UBERON:0000925!1.89e-23!169;UBERON:0006595!1.89e-23!169;UBERON:0001007!2.60e-18!155;UBERON:0001555!2.60e-18!155;UBERON:0007026!2.60e-18!155;UBERON:0004921!9.90e-17!129;UBERON:0004185!9.90e-17!129;UBERON:0000077!5.97e-16!130;UBERON:0000062!1.31e-13!511;UBERON:0001041!5.32e-13!98;UBERON:0000466!1.00e-12!126;UBERON:0001004!2.43e-12!72;UBERON:0000064!3.38e-11!219;UBERON:0000464!1.17e-10!104;UBERON:0000468!1.95e-10!659;UBERON:0009569!3.57e-10!113;UBERON:0000065!2.45e-09!53;UBERON:0005911!4.04e-09!82;UBERON:0001048!3.41e-08!168;UBERON:0000481!4.02e-08!347;UBERON:0005631!8.38e-08!14;UBERON:0000158!8.38e-08!14;UBERON:0005177!1.33e-07!107;UBERON:0000467!1.44e-07!625;UBERON:0000475!1.66e-07!365;UBERON:0000480!2.01e-07!626;UBERON:0003104!2.12e-07!238;UBERON:0009142!2.12e-07!238;UBERON:0004923!3.19e-07!57;UBERON:0000072!6.67e-07!46;UBERON:0008947!8.34e-07!38;UBERON:0003258!8.34e-07!38;UBERON:0002553!8.61e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.19e-10;33!UBERON:0001041;7.07e-08;14!UBERON:0000065;2.46e-07;44!UBERON:0002365;2.94e-07;31!UBERON:0002330;2.94e-07;31!UBERON:0005409;3.74e-07;22!UBERON:0001555;6.82e-07;54!UBERON:0001004;7.59e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.74e-26,160;UBERON:0000925,1.74e-26,160;UBERON:0006595,1.74e-26,160;UBERON:0001007,8.01e-21,145;UBERON:0001555,8.01e-21,145;UBERON:0007026,8.01e-21,145;UBERON:0004921,8.91e-20,118;UBERON:0001041,2.42e-15,87;UBERON:0001004,4.42e-14,74;UBERON:0005911,1.97e-10,82;UBERON:0000065,2.06e-10,54;UBERON:0009569,3.95e-09,112;UBERON:0005631,1.61e-08,14;UBERON:0000158,1.61e-08,14;UBERON:0005177,5.44e-08,101;UBERON:0000072,1.64e-07,47;UBERON:0008947,1.78e-07,38;UBERON:0003258,1.78e-07,38;UBERON:0002365,2.19e-07,31;UBERON:0002330,2.19e-07,31;UBERON:0001008,2.80e-07,48;UBERON:0000166,3.94e-07,22;UBERON:0000161,4.07e-07,36;UBERON:0006554,5.58e-07,47;UBERON:0001048,7.65e-07,160 | |||
|phase1_expression=4.1786027232228,2.14100523890983,0.563817616383885,1.0007329835313,0.893922188854576,1.74467704820074,2.53299878168311,0,0,0.737201809504527,2.09340350391728,4.58726881473362,3.9565046734268,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0.619264493264304,19.3078457140575,13.5542663450213,8.13458822366933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.614843499851882,0.458426764241994,14.9361068199942,30.4043243083232,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0,0.805658634218294,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,19.1881382942715,4.96971951695318,0.506522046658319,0.794455084879313,0.573673241497627,0,0,2.1349799145941,4.9333509683432,0.311211035399766,0,0.163461903113459,0.454072282934794,0,0,0,1.71141546463335,0,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0.751190294532984,0.113432183160021,3.22901344239952,0,0.211931901159562,5.10154863343484,0.103052529238439,3.09168648054755,0.744467425326359,2.86919764810153,0.779496041289589,5.3011092591264,0.184099797284599,0,5.32514388774922,1.30977727695932,1.52604533079439,20.6789112884728,25.6381353355385,25.2388043942323,0.853815942907168,0.795178609928912,2.32387885739037,2.17688215532278,2.01856680700503,1.82488679537915,1.56449532329816,0,0,0.464367928031979,0.721879481669586,2.9576700009961,2.52877035117153,2.16909926895134,3.08823123650703,2.61455332910887,2.13543557199987,2.69662616320329,2.35465758150415,1.15424147083917,0,0,0.4115740113314,0,1.26755034821831,4.91413608338813,7.08947888017685,0,5.53447973444011,0,42.5831107385467,19.1082980537953,21.1110842064425,28.6098295539856,0,0,0,0,3.63966952131047,0,0,0.951270761172991,11.8530659693891,5.15091697256924,0,0,0.148631162288728,13.1227367581488,10.2469098201304,12.0508832656029,14.4189221551586,11.9159914790724,11.1180976957911,0,0,0.621984346622316,0.288239906833923,0.75745460055828,0.063497894292169,0,0,3.4214489204541,0,0,0,0.112131084345361,0,0.2933531432838,1.68053230485111,0,0,0.531876233169741,3.12022310734098,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.599837947092342,0,0,0,9.82461907515489,5.7430967917057,0,1.01346914667305,0.61642896765115,2.68591444859843,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,2.9115920614313,3.21172179834891,3.78485796081443,1.7571212248907,0.300946099727719,2.27407504055985,2.0694614258501,4.64957918974806,4.05612170791747,0,0.195801157462741,0,0,0,0,9.39695471483404,4.99306318531491,7.25736703991233,2.97729369382532,28.2370030850035,3.36792113319688,1.02511319404561,2.55853624533352,5.30817939773905,1.48418066444991,0.616838775210622,0.710246901252508,0,0.519254429183621,0.116210378459959,9.66875596732978,14.6369723321398,26.7034867914099,0,0,0,3.15839729035188,4.46688955205606,5.49044838423799,2.92278449306521,1.79437769117889,0,0,1.72732732881711,1.54227252690289,1.08378575017541,1.00337954770971,2.03901018436031,4.98645605357235,2.91037181138832,0,0,0.256450125116389,0.328014645699706,0.976135183992909,11.8497163394881,0,0,24.1191525958392,24.0522291033513,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,16.5284915360978,28.2519399026706,32.2860162611298,37.2260633548424,0,1.5740617341532,0,0,0,0,0,1.14499909393593,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0.551365343546124,0,0.876901770507525,0,0,0,0.92947049429925,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,9.42976704710018,24.1308819192883,13.0669181833587,10.8265370893296,3.44404298136984,25.2707213501438,27.9360996728106,27.5668080248351,0,0,0,0,0,0,0,0,9.61416640147258,0,10.2916890712033,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42707567183837,0,0,0,0,77.5919575397493,6.83018765915069,86.3121572898842,0,0.422008249231538,0,0,0.211125408127993,0.597743964753209,3.31540698637377,22.9258800547391,0.818149460017238,0,6.53183134089796,2.78591888556713,1.61119057208048,0,1.38100767891707,0,5.55684950723184,1.93866549219044,0.371072392647405,0,15.3652379040288,0.874599999961957,7.24999575434793,0.796554137998498,1.01701460117107,12.5285471337006,0,0,0,0,0.241192877250816,0,0.331737779793674,0,2.19385397153973,1.19832309870889,50.8896666616902,12.3120413606075,0,42.193194503015,31.2356602546007,69.7516127739292,49.4451797584475,6.13703875792477,37.8454690973231,0,0,0,0,0,0,0,0,1.05499032264014,3.59112177950125,7.35035971456492,1.08194319871046,11.9431431729421,8.1380959343072,18.3309043480088,0,0,0,0.134802265961354,0,0,0,4.50028623543806,0.242780379534093,2.36750641709634,16.9387002468129,0.30607276163049,1.13735843331278,0.901940516486955,2.28114021073944,0.664653872707185,0,0,0,2.27687636823834,0,10.4135843001079,21.0683654440912,6.61649970011059,2.27144668714639,0,2.322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|phase1_expression=4.1786027232228,2.14100523890983,0.563817616383885,1.0007329835313,0.893922188854576,1.74467704820074,2.53299878168311,0,0,0.737201809504527,2.09340350391728,4.58726881473362,3.9565046734268,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0.619264493264304,19.3078457140575,13.5542663450213,8.13458822366933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.614843499851882,0.458426764241994,14.9361068199942,30.4043243083232,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0,0.805658634218294,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,19.1881382942715,4.96971951695318,0.506522046658319,0.794455084879313,0.573673241497627,0,0,2.1349799145941,4.9333509683432,0.311211035399766,0,0.163461903113459,0.454072282934794,0,0,0,1.71141546463335,0,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0.751190294532984,0.113432183160021,3.22901344239952,0,0.211931901159562,5.10154863343484,0.103052529238439,3.09168648054755,0.744467425326359,2.86919764810153,0.779496041289589,5.3011092591264,0.184099797284599,0,5.32514388774922,1.30977727695932,1.52604533079439,20.6789112884728,25.6381353355385,25.2388043942323,0.853815942907168,0.795178609928912,2.32387885739037,2.17688215532278,2.01856680700503,1.82488679537915,1.56449532329816,0,0,0.464367928031979,0.721879481669586,2.9576700009961,2.52877035117153,2.16909926895134,3.08823123650703,2.61455332910887,2.13543557199987,2.69662616320329,2.35465758150415,1.15424147083917,0,0,0.4115740113314,0,1.26755034821831,4.91413608338813,7.08947888017685,0,5.53447973444011,0,42.5831107385467,19.1082980537953,21.1110842064425,28.6098295539856,0,0,0,0,3.63966952131047,0,0,0.951270761172991,11.8530659693891,5.15091697256924,0,0,0.148631162288728,13.1227367581488,10.2469098201304,12.0508832656029,14.4189221551586,11.9159914790724,11.1180976957911,0,0,0.621984346622316,0.288239906833923,0.75745460055828,0.063497894292169,0,0,3.4214489204541,0,0,0,0.112131084345361,0,0.2933531432838,1.68053230485111,0,0,0.531876233169741,3.12022310734098,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.599837947092342,0,0,0,9.82461907515489,5.7430967917057,0,1.01346914667305,0.61642896765115,2.68591444859843,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,2.9115920614313,3.21172179834891,3.78485796081443,1.7571212248907,0.300946099727719,2.27407504055985,2.0694614258501,4.64957918974806,4.05612170791747,0,0.195801157462741,0,0,0,0,9.39695471483404,4.99306318531491,7.25736703991233,2.97729369382532,28.2370030850035,3.36792113319688,1.02511319404561,2.55853624533352,5.30817939773905,1.48418066444991,0.616838775210622,0.710246901252508,0,0.519254429183621,0.116210378459959,9.66875596732978,14.6369723321398,26.7034867914099,0,0,0,3.15839729035188,4.46688955205606,5.49044838423799,2.92278449306521,1.79437769117889,0,0,1.72732732881711,1.54227252690289,1.08378575017541,1.00337954770971,2.03901018436031,4.98645605357235,2.91037181138832,0,0,0.256450125116389,0.328014645699706,0.976135183992909,11.8497163394881,0,0,24.1191525958392,24.0522291033513,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,16.5284915360978,28.2519399026706,32.2860162611298,37.2260633548424,0,1.5740617341532,0,0,0,0,0,1.14499909393593,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0.551365343546124,0,0.876901770507525,0,0,0,0.92947049429925,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,9.42976704710018,24.1308819192883,13.0669181833587,10.8265370893296,3.44404298136984,25.2707213501438,27.9360996728106,27.5668080248351,0,0,0,0,0,0,0,0,9.61416640147258,0,10.2916890712033,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42707567183837,0,0,0,0,77.5919575397493,6.83018765915069,86.3121572898842,0,0.422008249231538,0,0,0.211125408127993,0.597743964753209,3.31540698637377,22.9258800547391,0.818149460017238,0,6.53183134089796,2.78591888556713,1.61119057208048,0,1.38100767891707,0,5.55684950723184,1.93866549219044,0.371072392647405,0,15.3652379040288,0.874599999961957,7.24999575434793,0.796554137998498,1.01701460117107,12.5285471337006,0,0,0,0,0.241192877250816,0,0.331737779793674,0,2.19385397153973,1.19832309870889,50.8896666616902,12.3120413606075,0,42.193194503015,31.2356602546007,69.7516127739292,49.4451797584475,6.13703875792477,37.8454690973231,0,0,0,0,0,0,0,0,1.05499032264014,3.59112177950125,7.35035971456492,1.08194319871046,11.9431431729421,8.1380959343072,18.3309043480088,0,0,0,0.134802265961354,0,0,0,4.50028623543806,0.242780379534093,2.36750641709634,16.9387002468129,0.30607276163049,1.13735843331278,0.901940516486955,2.28114021073944,0.664653872707185,0,0,0,2.27687636823834,0,10.4135843001079,21.0683654440912,6.61649970011059,2.27144668714639,0,2.322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| ||
|short_description=p3@DSP | |short_description=p3@DSP | ||
}} | }} |
Latest revision as of 18:48, 19 September 2015
Short description: | p3@DSP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DSP_5end |
Coexpression cluster: | C4626_salivary_amniotic_choriocarcinoma_Keratinocyte_maxillary_cervical_esophagus |
Association with transcript: | -5bp_to_ENST00000418664_5end |
EntrezGene: | DSP |
HGNC: | 3052 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.39e-28 | 253 |
endodermal cell | 1.70e-20 | 58 |
endo-epithelial cell | 5.40e-19 | 42 |
epithelial cell of alimentary canal | 5.28e-12 | 20 |
respiratory epithelial cell | 6.46e-07 | 13 |
extraembryonic cell | 9.06e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.74e-26 | 160 |
endoderm | 1.74e-26 | 160 |
presumptive endoderm | 1.74e-26 | 160 |
digestive system | 8.01e-21 | 145 |
digestive tract | 8.01e-21 | 145 |
primitive gut | 8.01e-21 | 145 |
subdivision of digestive tract | 8.91e-20 | 118 |
foregut | 2.42e-15 | 87 |
respiratory system | 4.42e-14 | 74 |
endo-epithelium | 1.97e-10 | 82 |
respiratory tract | 2.06e-10 | 54 |
subdivision of trunk | 3.95e-09 | 112 |
extraembryonic membrane | 1.61e-08 | 14 |
membranous layer | 1.61e-08 | 14 |
trunk region element | 5.44e-08 | 101 |
segment of respiratory tract | 1.64e-07 | 47 |
respiratory primordium | 1.78e-07 | 38 |
endoderm of foregut | 1.78e-07 | 38 |
exocrine gland | 2.19e-07 | 31 |
exocrine system | 2.19e-07 | 31 |
renal system | 2.80e-07 | 48 |
oral opening | 3.94e-07 | 22 |
orifice | 4.07e-07 | 36 |
urinary system structure | 5.58e-07 | 47 |
primordium | 7.65e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.72e-18 | 106 |
cell type cancer | 2.33e-12 | 143 |
adenocarcinoma | 1.29e-07 | 25 |