FFCP PHASE1:Hg19::chr17:64298497..64298514,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5578 | |EntrezGene=5578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9393 | |HGNC=9393 | ||
|TSSclassifier=strong | |||
|UniProt=B5BU22,P17252,Q7Z727,Q59FI5 | |UniProt=B5BU22,P17252,Q7Z727,Q59FI5 | ||
|association_with_transcript=-411bp_to_NM_002737,uc002jfo.1,uc002jfp.1_5end | |association_with_transcript=-411bp_to_NM_002737,uc002jfo.1,uc002jfp.1_5end | ||
|cluster_id=chr17:64298497..64298514,+ | |||
|description=CAGE_peak_4_at_PRKCA_5end | |description=CAGE_peak_4_at_PRKCA_5end | ||
|id=chr17:64298497..64298514,+ | |id=chr17:64298497..64298514,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.73e-07!180 | |ontology_enrichment_celltype=CL:0000055!3.73e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.79e-19;2!CL:0002540;5.92e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,7.52e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.07e-10;1!UBERON:0005425;2.07e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.23e-09!82;UBERON:0000073!6.06e-09!94;UBERON:0001016!6.06e-09!94;UBERON:0005743!1.18e-08!86;UBERON:0001950!6.22e-07!20 | |ontology_enrichment_uberon=UBERON:0001017!2.23e-09!82;UBERON:0000073!6.06e-09!94;UBERON:0001016!6.06e-09!94;UBERON:0005743!1.18e-08!86;UBERON:0001950!6.22e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0002902;2.07e-10;1!UBERON:0006834;2.07e-10;1!UBERON:0000998;2.07e-10;1!UBERON:0000941;2.07e-10;1!UBERON:0001785;2.07e-10;1!UBERON:0002464;2.07e-10;1!UBERON:0004904;2.07e-10;1!UBERON:0006868;2.07e-10;1!UBERON:0001021;2.07e-10;1!UBERON:0009899;2.07e-10;1!UBERON:0002021;3.51e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,8.95e-11,1;UBERON:0000941,1.73e-10,1;UBERON:0001785,1.73e-10,1;UBERON:0002464,1.73e-10,1;UBERON:0004904,1.73e-10,1;UBERON:0001021,1.73e-10,1;UBERON:0003902,1.73e-10,1;UBERON:0005425,1.73e-10,1;UBERON:0000998,3.01e-10,1;UBERON:0006868,3.01e-10,1;UBERON:0002902,3.29e-10,1;UBERON:0009899,3.29e-10,1;UBERON:0002021,4.22e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0.612002073732759,0,0,0,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0.128091319725675,0,0.822189523018381,0.829050053357545,0,0.296573126324121,0.267540828089713,1.04535523804977,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0.144824403882799,0,1.34140171940727,0.12786256184353,0.722878304769133,0.50133791063589,0.289693037921647,0,0.486634870302636,0.378139268656271,1.10864698731282,0.175669571386252,0.458426764241994,0,0,0.324547393654683,0,0,0,0.571994910780128,0,0,0,0.347140501607594,0,0.419499436209906,0.550236083880135,0,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0.662045904066094,1.72101972449288,0.709336764396714,0,0,0.24666754841716,1.8672662123986,0,0.163461903113459,0.302714855289863,0,0.234321431833797,0.936480230490962,0.570471821544449,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0.554128230968366,0,0.30648779579902,0.150238058906597,0.340296549480063,0.538168907066586,0.640672166455702,0.211931901159562,0.900273288253207,0.103052529238439,0.515281080091258,0.18611685633159,0.506328996723799,0.0974370051611986,0.504867548488229,0.276149695926898,0.161646056818812,0,0.201504196455281,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0.463721619900307,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.352193736052904,0.414656231081544,0.864719720501769,0.6312121671319,0.063497894292169,0,0,0,0,0,0,0.560655421726804,0.87192013766656,0.36669142910475,0,0,0,0.26593811658487,0,1.02882949704857,1.41849132023278,0,0,0.542621605391443,0,0,0,0,0,0,0.199945982364114,0,0,0,0.479249710983165,1.14861935834114,0,0.144781306667579,0.205476322550383,0.179060963239896,0.224170287987055,0.197030760201927,0.215627574859517,0.128343036279748,1.27047312111232,2.60279707715243,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0.315404830067869,0.702848489956279,0.300946099727719,0,0,0.664225598535437,0.737476674166813,0,0,0.343143423810856,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0,0,0,0.355123450626254,0.246381468041427,0.519254429183621,0.116210378459959,0,0,0,0.229628896329213,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,1.46139224653261,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0.41254749960294,0.574265537996172,0,0,0,0.770243085573222,0,0.137836572484531,0,0.435050081742686,0.426133137080504,0.178064071293475,0,0,0.127612712494584,0.10115778085555,0,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0,0,0.372158369359667,0,0.190630193923825,0.255897791311334,0.42793898803392,0.95460974377781,0,0.179872457583315,0.823611089208164,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.196498082026242,0,0.354761064070598,0.211107635297664,0,0.75894634753143,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,3.48595032407229,0.318852545457645,0,0,0,0,0,0,0.47003968731907,0,0,0,0,0,0,0,0,0.166849141711909,0,5.01131113011436,0,0.270455678475983,0.33307196799782,0,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0,0.306806047506464,0,0,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0.236387681767936,0,0,0.347249989866585,0,0,0,0.221158519862449,0,0.438770794307945,0,0.139423744278603,0.769502585037971,0,0.23056390438806,0,0,0,0.274792780205587,0,0,0.784901281975124,0,0.451191321234361,0.784250137270958,0.335643173951685,0.37950746544837,0,0,0,0,0.216388639742091,0.995261931078505,0.0884575645033392,0,0,0.494255755786011,0,0.269604531922708,0,0,0,0,0,0.394584402849391,0,0.91821828489147,0.126373159256976,0.60129367765797,0.72581733978073,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0.698906672968121,0.343972064943233,0,0.0730893170861856,0,0,0,0.225980740780532,0.137041924646751,0,0.253243183823515,0,0,0.426905989478705,0,0.144090417154106,0,0,0,0.49701014226173,0,0.67952103036807,0.209205692624666,0.203996435272644,0.288950589901519,0,0.410716136675979,0,0,0,0,0.229160424011684,0,0.399358000997982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| ||
|short_description=p4@PRKCA | |short_description=p4@PRKCA | ||
}} | }} |
Latest revision as of 21:15, 16 September 2015
Short description: | p4@PRKCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRKCA_5end |
Coexpression cluster: | NA |
Association with transcript: | -411bp_to_NM_002737, uc002jfo.1, uc002jfp.1_5end |
EntrezGene: | PRKCA |
HGNC: | 9393 |
UniProt: | B5BU22P17252Q7Z727Q59FI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 7.52e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 8.95e-11 | 1 |
cranial nerve II | 1.73e-10 | 1 |
cranial nerve | 1.73e-10 | 1 |
nerve trunk | 1.73e-10 | 1 |
nerve connecting eye with brain | 1.73e-10 | 1 |
nerve | 1.73e-10 | 1 |
retinal neural layer | 1.73e-10 | 1 |
presumptive neural retina | 1.73e-10 | 1 |
seminal vesicle | 3.01e-10 | 1 |
seminal fluid secreting gland | 3.01e-10 | 1 |
occipital pole | 3.29e-10 | 1 |
pole of cerebral hemisphere | 3.29e-10 | 1 |
occipital lobe | 4.22e-08 | 5 |