FFCP PHASE1:Hg19::chr22:32439109..32439118,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6523 | |EntrezGene=6523 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11036 | |HGNC=11036 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=72bp_to_uc003amc.2_5end | |association_with_transcript=72bp_to_uc003amc.2_5end | ||
|cluster_id=chr22:32439109..32439118,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_4_at_SLC5A1_5end | |description=CAGE_peak_4_at_SLC5A1_5end | ||
|id=chr22:32439109..32439118,+ | |id=chr22:32439109..32439118,+ | ||
|ontology_enrichment_celltype=CL:0001014!1.99e-11!2;CL:0001016!1.99e-11!2;CL:0002178!2.50e-07!3 | |ontology_enrichment_celltype=CL:0001014!1.99e-11!2;CL:0001016!1.99e-11!2;CL:0002178!2.50e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0001014;5.37e-08;2!CL:0001016;5.37e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,6.15e-08,2;CL:0001016,6.15e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;5.42e-15;1!UBERON:0006242;2.25e-14;1!UBERON:0007297;3.82e-08;2!UBERON:0008814;4.38e-08;2!UBERON:0010056;4.38e-08;2!UBERON:0006595;7.48e-07;86 | |||
|ontology_enrichment_disease=DOID:3493!7.88e-11!2 | |ontology_enrichment_disease=DOID:3493!7.88e-11!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!2.48e-13!155;UBERON:0001555!2.48e-13!155;UBERON:0007026!2.48e-13!155;UBERON:0007023!2.61e-13!115;UBERON:0004921!1.73e-12!129;UBERON:0004185!1.73e-12!129;UBERON:0003127!7.75e-12!2;UBERON:0004119!8.45e-12!169;UBERON:0000925!8.45e-12!169;UBERON:0006595!8.45e-12!169;UBERON:0005409!4.67e-10!35;UBERON:0000160!2.58e-08!27;UBERON:0006947!3.65e-08!3;UBERON:0004054!3.65e-08!3;UBERON:0003101!8.13e-08!22;UBERON:0000079!8.13e-08!22;UBERON:0000059!8.83e-08!11;UBERON:0003135!1.05e-07!11;UBERON:0002110!1.48e-07!3;UBERON:0006242!1.48e-07!3;UBERON:0000077!2.05e-07!130;UBERON:0000998!8.34e-07!1;UBERON:0006868!8.34e-07!1 | |ontology_enrichment_uberon=UBERON:0001007!2.48e-13!155;UBERON:0001555!2.48e-13!155;UBERON:0007026!2.48e-13!155;UBERON:0007023!2.61e-13!115;UBERON:0004921!1.73e-12!129;UBERON:0004185!1.73e-12!129;UBERON:0003127!7.75e-12!2;UBERON:0004119!8.45e-12!169;UBERON:0000925!8.45e-12!169;UBERON:0006595!8.45e-12!169;UBERON:0005409!4.67e-10!35;UBERON:0000160!2.58e-08!27;UBERON:0006947!3.65e-08!3;UBERON:0004054!3.65e-08!3;UBERON:0003101!8.13e-08!22;UBERON:0000079!8.13e-08!22;UBERON:0000059!8.83e-08!11;UBERON:0003135!1.05e-07!11;UBERON:0002110!1.48e-07!3;UBERON:0006242!1.48e-07!3;UBERON:0000077!2.05e-07!130;UBERON:0000998!8.34e-07!1;UBERON:0006868!8.34e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.40e-27;2!UBERON:0002108;2.28e-24;4!UBERON:0006947;6.06e-19;3!UBERON:0004054;6.06e-19;3!UBERON:0000160;2.17e-18;17!UBERON:0000998;5.42e-15;1!UBERON:0006868;5.42e-15;1!UBERON:0001000;1.07e-14;1!UBERON:0005352;1.07e-14;1!UBERON:0005904;1.84e-14;4!UBERON:0005409;2.13e-14;22!UBERON:0002372;2.25e-14;1!UBERON:0001961;2.25e-14;1!UBERON:0001744;2.25e-14;1!UBERON:0001042;2.25e-14;1!UBERON:0001735;2.25e-14;1!UBERON:0004921;1.48e-11;33!UBERON:0003126;1.42e-08;7!UBERON:0001005;1.42e-08;7!UBERON:0000341;7.78e-08;2!UBERON:0006562;7.78e-08;2!UBERON:0001555;6.36e-07;54!UBERON:0001155;7.53e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,9.31e-28,2;UBERON:0002108,2.28e-24,4;UBERON:0006947,7.26e-19,3;UBERON:0004054,7.26e-19,3;UBERON:0000160,1.99e-18,17;UBERON:0000998,6.22e-15,1;UBERON:0006868,6.22e-15,1;UBERON:0001000,1.23e-14,1;UBERON:0005352,1.23e-14,1;UBERON:0005904,2.11e-14,4;UBERON:0002372,3.15e-14,1;UBERON:0001961,3.15e-14,1;UBERON:0001744,3.15e-14,1;UBERON:0001735,3.15e-14,1;UBERON:0005409,9.16e-13,25;UBERON:0007023,1.51e-10,114;UBERON:0003126,1.27e-08,7;UBERON:0001005,1.27e-08,7;UBERON:0004921,4.44e-08,118;UBERON:0001007,6.11e-08,145;UBERON:0001555,6.11e-08,145;UBERON:0007026,6.11e-08,145;UBERON:0000341,7.03e-08,2;UBERON:0004119,4.37e-07,160;UBERON:0000925,4.37e-07,160;UBERON:0006595,4.37e-07,160;UBERON:0001155,7.00e-07,9 | |||
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|short_description=p4@SLC5A1 | |short_description=p4@SLC5A1 | ||
}} | }} |
Latest revision as of 21:41, 19 September 2015
Short description: | p4@SLC5A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC5A1_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 72bp_to_uc003amc.2_5end |
EntrezGene: | SLC5A1 |
HGNC: | 11036 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 6.15e-08 | 2 |
immature CD1a-positive Langerhans cell | 6.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 9.31e-28 | 2 |
small intestine | 2.28e-24 | 4 |
male genital duct | 7.26e-19 | 3 |
internal male genitalia | 7.26e-19 | 3 |
intestine | 1.99e-18 | 17 |
seminal vesicle | 6.22e-15 | 1 |
seminal fluid secreting gland | 6.22e-15 | 1 |
vas deferens | 1.23e-14 | 1 |
spermatic cord | 1.23e-14 | 1 |
duct of male reproductive system | 2.11e-14 | 4 |
tonsil | 3.15e-14 | 1 |
mucosa-associated lymphoid tissue | 3.15e-14 | 1 |
lymphoid tissue | 3.15e-14 | 1 |
tonsillar ring | 3.15e-14 | 1 |
gastrointestinal system | 9.16e-13 | 25 |
adult organism | 1.51e-10 | 114 |
trachea | 1.27e-08 | 7 |
respiratory airway | 1.27e-08 | 7 |
subdivision of digestive tract | 4.44e-08 | 118 |
digestive system | 6.11e-08 | 145 |
digestive tract | 6.11e-08 | 145 |
primitive gut | 6.11e-08 | 145 |
throat | 7.03e-08 | 2 |
endoderm-derived structure | 4.37e-07 | 160 |
endoderm | 4.37e-07 | 160 |
presumptive endoderm | 4.37e-07 | 160 |
colon | 7.00e-07 | 9 |