FFCP PHASE1:Hg19::chr12:10856713..10856723,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8531 | |EntrezGene=8531 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2428 | |HGNC=2428 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=313bp_to_ENST00000536823_5end | |association_with_transcript=313bp_to_ENST00000536823_5end | ||
|cluster_id=chr12:10856713..10856723,- | |||
|coexpression_cluster_id=C538 | |coexpression_cluster_id=C538 | ||
|description=CAGE_peak_23_at_CSDA_5end | |description=CAGE_peak_23_at_CSDA_5end | ||
|id=chr12:10856713..10856723,- | |id=chr12:10856713..10856723,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002598;1.97e-10;2!CL:0000746;2.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002598,1.89e-10,2;CL:0000746,2.32e-07,3;CL:0000513,2.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.30e-19;1!CL:0000513;2.25e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:178;3.56e-19;1!DOID:326;3.56e-19;1!DOID:3978;3.56e-19;1!DOID:3394;3.56e-19;1!DOID:5844;3.56e-19;1!DOID:114;2.85e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:178,3.25e-19,1;DOID:326,3.25e-19,1;DOID:3978,3.25e-19,1;DOID:3394,3.25e-19,1;DOID:5844,3.25e-19,1;DOID:114,2.72e-10,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001389;9.82e-20;1!UBERON:0000026;9.82e-20;1!UBERON:0008784;9.82e-20;1!UBERON:0006058;9.82e-20;1!UBERON:0003663;9.82e-20;1!UBERON:0004256;9.82e-20;1!UBERON:0004708;9.82e-20;1!UBERON:0002101;9.82e-20;1!UBERON:0004709;9.82e-20;1!UBERON:0002529;9.82e-20;1!UBERON:0010538;9.82e-20;1!UBERON:0003661;9.82e-20;1!UBERON:0010890;9.82e-20;1!UBERON:0002471;9.82e-20;1!UBERON:0001383;9.82e-20;1!UBERON:0010758;9.82e-20;1!UBERON:0010707;9.82e-20;1!UBERON:0000978;9.82e-20;1!UBERON:0002103;9.82e-20;1!UBERON:0001665;9.82e-20;1!UBERON:0003823;9.82e-20;1!UBERON:0000154;9.82e-20;1!UBERON:0010709;9.82e-20;1!UBERON:0002084;1.30e-19;1!UBERON:0002082;1.30e-19;1!UBERON:0007100;6.67e-12;25!UBERON:0001134;6.74e-11;16!UBERON:0002036;6.74e-11;16!UBERON:0005090;1.50e-10;2!UBERON:0001630;1.50e-10;2!UBERON:0004151;2.05e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,8.95e-20,1;UBERON:0001389,8.95e-20,1;UBERON:0000026,8.95e-20,1;UBERON:0008784,8.95e-20,1;UBERON:0006058,8.95e-20,1;UBERON:0003663,8.95e-20,1;UBERON:0004256,8.95e-20,1;UBERON:0004708,8.95e-20,1;UBERON:0002101,8.95e-20,1;UBERON:0004709,8.95e-20,1;UBERON:0002529,8.95e-20,1;UBERON:0010538,8.95e-20,1;UBERON:0003661,8.95e-20,1;UBERON:0010890,8.95e-20,1;UBERON:0002471,8.95e-20,1;UBERON:0001383,8.95e-20,1;UBERON:0004357,8.95e-20,1;UBERON:0004347,8.95e-20,1;UBERON:0005420,8.95e-20,1;UBERON:0005732,8.95e-20,1;UBERON:0010758,8.95e-20,1;UBERON:0010707,8.95e-20,1;UBERON:0000978,8.95e-20,1;UBERON:0002103,8.95e-20,1;UBERON:0001665,8.95e-20,1;UBERON:0003823,8.95e-20,1;UBERON:0000154,8.95e-20,1;UBERON:0010709,8.95e-20,1;UBERON:0005733,8.95e-20,1;UBERON:0005730,8.95e-20,1;UBERON:0002084,1.30e-19,1;UBERON:0002082,1.30e-19,1;UBERON:0010226,1.30e-19,1;UBERON:0007100,4.98e-11,27;UBERON:0005090,1.43e-10,2;UBERON:0001630,1.43e-10,2;UBERON:0007503,3.08e-08,78;UBERON:0004151,2.05e-07,3;UBERON:0001134,2.08e-07,62;UBERON:0002036,2.08e-07,62;UBERON:0003082,2.08e-07,62;UBERON:0002385,3.54e-07,64;UBERON:0001015,3.54e-07,64;UBERON:0000383,3.54e-07,64 | |||
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| ||
|short_description=p23@CSDA | |short_description=p23@CSDA | ||
}} | }} |
Latest revision as of 04:16, 16 September 2015
Short description: | p23@CSDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_CSDA_5end |
Coexpression cluster: | C538_left_skeletal_heart_seminal_ductus_adipose_mature |
Association with transcript: | 313bp_to_ENST00000536823_5end |
EntrezGene: | CSDA |
HGNC: | 2428 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial smooth muscle cell | 1.89e-10 | 2 |
cardiac muscle cell | 2.32e-07 | 3 |
cardiac muscle myoblast | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 3.25e-19 | 1 |
ischemia | 3.25e-19 | 1 |
extrinsic cardiomyopathy | 3.25e-19 | 1 |
myocardial ischemia | 3.25e-19 | 1 |
myocardial infarction | 3.25e-19 | 1 |
heart disease | 2.72e-10 | 2 |