FFCP PHASE1:Hg19::chr12:30907700..30907748,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65981 | |EntrezGene=65981 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21259 | |HGNC=21259 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_ENST00000546129_5end | |association_with_transcript=9bp_to_ENST00000546129_5end | ||
|cluster_id=chr12:30907700..30907748,- | |||
|description=CAGE_peak_2_at_CAPRIN2_5end | |description=CAGE_peak_2_at_CAPRIN2_5end | ||
|id=chr12:30907700..30907748,- | |id=chr12:30907700..30907748,- | ||
|ontology_enrichment_celltype=CL:0000057!7.08e-09!75;CL:0000055!2.34e-07!180 | |ontology_enrichment_celltype=CL:0000057!7.08e-09!75;CL:0000055!2.34e-07!180 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.70e-09,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.82e-09!115;UBERON:0001049!3.00e-08!57;UBERON:0005068!3.00e-08!57;UBERON:0006241!3.00e-08!57;UBERON:0007135!3.00e-08!57;UBERON:0001017!3.22e-08!82;UBERON:0000025!3.61e-08!194;UBERON:0000073!7.17e-08!94;UBERON:0001016!7.17e-08!94;UBERON:0000955!1.34e-07!69;UBERON:0006238!1.34e-07!69;UBERON:0002616!1.56e-07!59;UBERON:0003080!2.26e-07!42;UBERON:0002780!2.35e-07!41;UBERON:0001890!2.35e-07!41;UBERON:0006240!2.35e-07!41;UBERON:0000475!2.95e-07!365;UBERON:0005743!3.47e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!1.82e-09!115;UBERON:0001049!3.00e-08!57;UBERON:0005068!3.00e-08!57;UBERON:0006241!3.00e-08!57;UBERON:0007135!3.00e-08!57;UBERON:0001017!3.22e-08!82;UBERON:0000025!3.61e-08!194;UBERON:0000073!7.17e-08!94;UBERON:0001016!7.17e-08!94;UBERON:0000955!1.34e-07!69;UBERON:0006238!1.34e-07!69;UBERON:0002616!1.56e-07!59;UBERON:0003080!2.26e-07!42;UBERON:0002780!2.35e-07!41;UBERON:0001890!2.35e-07!41;UBERON:0006240!2.35e-07!41;UBERON:0000475!2.95e-07!365;UBERON:0005743!3.47e-07!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.91e-09,114;UBERON:0001016,1.04e-08,89;UBERON:0000025,3.54e-08,192;UBERON:0001049,4.89e-08,56;UBERON:0005068,4.89e-08,56;UBERON:0006241,4.89e-08,56;UBERON:0007135,4.89e-08,56;UBERON:0001017,5.69e-08,81;UBERON:0000073,1.90e-07,53;UBERON:0002616,1.90e-07,53;UBERON:0000955,2.11e-07,68;UBERON:0006238,2.11e-07,68;UBERON:0002780,2.24e-07,41;UBERON:0001890,2.24e-07,41;UBERON:0003080,2.24e-07,41;UBERON:0006240,2.24e-07,41;UBERON:0010314,4.37e-07,132 | |||
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| ||
|short_description=p2@CAPRIN2 | |short_description=p2@CAPRIN2 | ||
}} | }} |
Latest revision as of 02:47, 18 September 2015
Short description: | p2@CAPRIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CAPRIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000546129_5end |
EntrezGene: | CAPRIN2 |
HGNC: | 21259 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.70e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.91e-09 | 114 |
nervous system | 1.04e-08 | 89 |
tube | 3.54e-08 | 192 |
neural tube | 4.89e-08 | 56 |
neural rod | 4.89e-08 | 56 |
future spinal cord | 4.89e-08 | 56 |
neural keel | 4.89e-08 | 56 |
central nervous system | 5.69e-08 | 81 |
regional part of nervous system | 1.90e-07 | 53 |
regional part of brain | 1.90e-07 | 53 |
brain | 2.11e-07 | 68 |
future brain | 2.11e-07 | 68 |
regional part of forebrain | 2.24e-07 | 41 |
forebrain | 2.24e-07 | 41 |
anterior neural tube | 2.24e-07 | 41 |
future forebrain | 2.24e-07 | 41 |
structure with developmental contribution from neural crest | 4.37e-07 | 132 |