FFCP PHASE1:Hg19::chr17:43487793..43487803,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=201176 | |EntrezGene=201176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31813 | |HGNC=31813 | ||
|TSSclassifier=strong | |||
|UniProt=E9PNX6 | |UniProt=E9PNX6 | ||
|association_with_transcript=-1bp_to_ENST00000528677_5end | |association_with_transcript=-1bp_to_ENST00000528677_5end | ||
|cluster_id=chr17:43487793..43487803,- | |||
|coexpression_cluster_id=C57 | |coexpression_cluster_id=C57 | ||
|description=CAGE_peak_8_at_ARHGAP27_5end | |description=CAGE_peak_8_at_ARHGAP27_5end | ||
|id=chr17:43487793..43487803,- | |id=chr17:43487793..43487803,- | ||
|ontology_enrichment_celltype=CL:0000037!1.44e-55!172;CL:0000566!1.44e-55!172;CL:0000988!1.97e-55!182;CL:0000542!4.86e-55!53;CL:0000051!4.86e-55!53;CL:0000838!5.04e-54!52;CL:0000738!1.30e-52!140;CL:0002032!8.82e-52!165;CL:0000837!8.82e-52!165;CL:0002087!1.14e-48!119;CL:0002031!2.39e-45!124;CL:0000084!2.22e-27!25;CL:0000827!2.22e-27!25;CL:0000945!8.71e-24!24;CL:0000826!8.71e-24!24;CL:0000791!1.53e-19!18;CL:0000789!1.53e-19!18;CL:0002420!1.53e-19!18;CL:0002419!1.53e-19!18;CL:0000790!1.53e-19!18;CL:0000236!3.17e-13!14;CL:0000625!1.40e-11!11;CL:0000763!2.31e-11!112;CL:0000049!2.31e-11!112;CL:0000134!1.23e-10!358;CL:0002320!6.25e-10!365;CL:0000624!2.55e-08!6;CL:0000080!3.26e-08!6;CL:0000766!1.01e-07!76;CL:0000219!1.57e-07!390;CL:0000839!7.05e-07!70 | |ontology_enrichment_celltype=CL:0000037!1.44e-55!172;CL:0000566!1.44e-55!172;CL:0000988!1.97e-55!182;CL:0000542!4.86e-55!53;CL:0000051!4.86e-55!53;CL:0000838!5.04e-54!52;CL:0000738!1.30e-52!140;CL:0002032!8.82e-52!165;CL:0000837!8.82e-52!165;CL:0002087!1.14e-48!119;CL:0002031!2.39e-45!124;CL:0000084!2.22e-27!25;CL:0000827!2.22e-27!25;CL:0000945!8.71e-24!24;CL:0000826!8.71e-24!24;CL:0000791!1.53e-19!18;CL:0000789!1.53e-19!18;CL:0002420!1.53e-19!18;CL:0002419!1.53e-19!18;CL:0000790!1.53e-19!18;CL:0000236!3.17e-13!14;CL:0000625!1.40e-11!11;CL:0000763!2.31e-11!112;CL:0000049!2.31e-11!112;CL:0000134!1.23e-10!358;CL:0002320!6.25e-10!365;CL:0000624!2.55e-08!6;CL:0000080!3.26e-08!6;CL:0000766!1.01e-07!76;CL:0000219!1.57e-07!390;CL:0000839!7.05e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.46e-41;25!CL:0000791;5.73e-34;18!CL:0000789;5.73e-34;18!CL:0002419;5.73e-34;18!CL:0000542;2.15e-32;53!CL:0000945;1.18e-18;24!CL:0000625;1.73e-18;11!CL:0000624;8.42e-15;6!CL:0002087;1.01e-08;104!CL:0000898;3.06e-08;3!CL:0000623;3.06e-08;3!CL:0000738;5.47e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.68e-65,52;CL:0000542,1.27e-63,53;CL:0000051,1.27e-63,53;CL:0000084,2.72e-42,25;CL:0000827,2.72e-42,25;CL:0000791,1.80e-34,18;CL:0000789,1.80e-34,18;CL:0002420,1.80e-34,18;CL:0002419,1.80e-34,18;CL:0000790,1.80e-34,18;CL:0002087,1.79e-29,115;CL:0000738,2.74e-29,136;CL:0002031,2.38e-26,120;CL:0000988,1.10e-23,177;CL:0000037,1.85e-21,168;CL:0000945,6.88e-19,24;CL:0000826,6.88e-19,24;CL:0000625,1.68e-18,11;CL:0002032,3.75e-18,161;CL:0000837,3.75e-18,161;CL:0000624,3.00e-15,6;CL:0000898,1.89e-08,3;CL:0000623,2.39e-08,3;CL:0000825,2.39e-08,3;CL:0000236,2.44e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000790;5.73e-34;18!CL:0000051;2.15e-32;53 | |||
|ontology_enrichment_disease=DOID:2531!5.78e-18!51;DOID:0060083!5.78e-18!51;DOID:1240!2.66e-12!39;DOID:0060058!4.91e-09!10 | |ontology_enrichment_disease=DOID:2531!5.78e-18!51;DOID:0060083!5.78e-18!51;DOID:1240!2.66e-12!39;DOID:0060058!4.91e-09!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.46e-15!102;UBERON:0003061!1.46e-15!102;UBERON:0002193!2.85e-15!112;UBERON:0000178!1.37e-11!15;UBERON:0000179!1.37e-11!15;UBERON:0000463!1.37e-11!15;UBERON:0002384!5.53e-09!375;UBERON:0004177!3.73e-07!7;UBERON:0002370!9.04e-07!4;UBERON:0005058!9.04e-07!4;UBERON:0009113!9.04e-07!4;UBERON:0003295!9.04e-07!4;UBERON:0005562!9.04e-07!4 | |ontology_enrichment_uberon=UBERON:0002390!1.46e-15!102;UBERON:0003061!1.46e-15!102;UBERON:0002193!2.85e-15!112;UBERON:0000178!1.37e-11!15;UBERON:0000179!1.37e-11!15;UBERON:0000463!1.37e-11!15;UBERON:0002384!5.53e-09!375;UBERON:0004177!3.73e-07!7;UBERON:0002370!9.04e-07!4;UBERON:0005058!9.04e-07!4;UBERON:0009113!9.04e-07!4;UBERON:0003295!9.04e-07!4;UBERON:0005562!9.04e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.59e-20;15!UBERON:0000179;3.59e-20;15!UBERON:0000463;3.59e-20;15!UBERON:0002390;9.38e-13;32!UBERON:0002193;1.38e-07;42!UBERON:0002370;2.78e-07;2!UBERON:0005058;2.78e-07;2!UBERON:0009113;2.78e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.26e-20,15;UBERON:0000179,5.26e-20,15;UBERON:0000463,5.26e-20,15;UBERON:0002370,3.99e-12,4;UBERON:0005058,3.99e-12,4;UBERON:0009113,3.99e-12,4;UBERON:0003295,3.99e-12,4;UBERON:0005562,3.99e-12,4;UBERON:0003351,4.69e-08,6;UBERON:0001042,5.12e-07,10;UBERON:0009145,5.12e-07,10;UBERON:0004177,6.87e-07,7;UBERON:0005057,6.87e-07,7 | |||
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|short_description=p8@ARHGAP27 | |short_description=p8@ARHGAP27 | ||
}} | }} |
Latest revision as of 01:48, 25 September 2015
Short description: | p8@ARHGAP27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ARHGAP27_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | -1bp_to_ENST00000528677_5end |
EntrezGene: | ARHGAP27 |
HGNC: | 31813 |
UniProt: | E9PNX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.68e-65 | 52 |
lymphocyte | 1.27e-63 | 53 |
common lymphoid progenitor | 1.27e-63 | 53 |
T cell | 2.72e-42 | 25 |
pro-T cell | 2.72e-42 | 25 |
mature alpha-beta T cell | 1.80e-34 | 18 |
alpha-beta T cell | 1.80e-34 | 18 |
immature T cell | 1.80e-34 | 18 |
mature T cell | 1.80e-34 | 18 |
immature alpha-beta T cell | 1.80e-34 | 18 |
nongranular leukocyte | 1.79e-29 | 115 |
leukocyte | 2.74e-29 | 136 |
hematopoietic lineage restricted progenitor cell | 2.38e-26 | 120 |
hematopoietic cell | 1.10e-23 | 177 |
hematopoietic stem cell | 1.85e-21 | 168 |
lymphocyte of B lineage | 6.88e-19 | 24 |
pro-B cell | 6.88e-19 | 24 |
CD8-positive, alpha-beta T cell | 1.68e-18 | 11 |
hematopoietic oligopotent progenitor cell | 3.75e-18 | 161 |
hematopoietic multipotent progenitor cell | 3.75e-18 | 161 |
CD4-positive, alpha-beta T cell | 3.00e-15 | 6 |
naive T cell | 1.89e-08 | 3 |
natural killer cell | 2.39e-08 | 3 |
pro-NK cell | 2.39e-08 | 3 |
B cell | 2.44e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
blood | 5.26e-20 | 15 |
haemolymphatic fluid | 5.26e-20 | 15 |
organism substance | 5.26e-20 | 15 |
thymus | 3.99e-12 | 4 |
hemolymphoid system gland | 3.99e-12 | 4 |
thymic region | 3.99e-12 | 4 |
pharyngeal gland | 3.99e-12 | 4 |
thymus primordium | 3.99e-12 | 4 |
pharyngeal epithelium | 4.69e-08 | 6 |
chordate pharynx | 5.12e-07 | 10 |
pharyngeal region of foregut | 5.12e-07 | 10 |
hemopoietic organ | 6.87e-07 | 7 |
immune organ | 6.87e-07 | 7 |