FFCP PHASE1:Hg19::chr1:181395412..181395421,+: Difference between revisions
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|id=chr1:181395412..181395421,+
|short_description=p@chr1:181395412..181395421,+
|description=CAGE_peak_at_chr1:181395412..181395421,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:181395412..181395421,+ | |||
|coexpression_cluster_id=C2544 | |||
|description=CAGE_peak_at_chr1:181395412..181395421,+ | |||
|id=chr1:181395412..181395421,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!1.03e-09!1;DOID:1357!1.03e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:5409;8.69e-18;4!DOID:1325;8.99e-11;7!DOID:3904;8.99e-11;7!DOID:3905;1.12e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.03e-17,4;DOID:1325,9.89e-11,7;DOID:3904,9.89e-11,7;DOID:3905,1.21e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0002020!2.96e-17!34;UBERON:0003528!2.96e-17!34;UBERON:0002619!1.52e-16!22;UBERON:0003075!1.18e-15!86;UBERON:0007284!1.18e-15!86;UBERON:0005743!2.02e-15!86;UBERON:0001049!5.57e-15!57;UBERON:0005068!5.57e-15!57;UBERON:0006241!5.57e-15!57;UBERON:0007135!5.57e-15!57;UBERON:0002346!7.44e-15!90;UBERON:0001869!1.31e-14!32;UBERON:0000956!1.50e-14!25;UBERON:0000203!1.50e-14!25;UBERON:0002780!2.65e-14!41;UBERON:0001890!2.65e-14!41;UBERON:0006240!2.65e-14!41;UBERON:0002791!3.78e-14!33;UBERON:0003056!5.76e-14!61;UBERON:0003080!6.13e-14!42;UBERON:0001017!6.72e-14!82;UBERON:0000073!9.32e-14!94;UBERON:0001016!9.32e-14!94;UBERON:0001893!1.03e-13!34;UBERON:0001950!1.91e-13!20;UBERON:0000955!6.54e-12!69;UBERON:0006238!6.54e-12!69;UBERON:0002616!7.61e-12!59;UBERON:0000033!9.11e-12!123;UBERON:0000153!4.20e-11!129;UBERON:0007811!4.20e-11!129;UBERON:0001764!1.03e-09!1;UBERON:0001825!1.03e-09!1;UBERON:0002146!2.16e-09!1;UBERON:0005623!2.16e-09!1;UBERON:0003112!3.53e-09!1;UBERON:0000032!3.53e-09!1;UBERON:0005253!3.53e-09!1;UBERON:0003128!3.53e-09!1;UBERON:0002241!3.53e-09!1;UBERON:0001703!3.53e-09!1;UBERON:0004761!3.53e-09!1;UBERON:0009617!3.53e-09!1;UBERON:0001874!3.83e-09!1;UBERON:0002022!4.87e-09!1;UBERON:0004121!8.10e-08!169;UBERON:0000924!1.40e-07!173;UBERON:0006601!1.40e-07!173;UBERON:0001872!1.71e-07!5;UBERON:0000349!1.77e-07!5;UBERON:0000966!1.95e-07!5;UBERON:0005388!1.95e-07!5;UBERON:0001802!1.95e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.04e-34;2!UBERON:0002757;5.04e-34;2!UBERON:0010134;5.04e-34;2!UBERON:0005408;5.04e-34;2!UBERON:0001899;5.04e-34;2!UBERON:0003296;8.69e-18;4!UBERON:0010133;8.69e-18;4!UBERON:0002784;8.69e-18;4!UBERON:0001872;1.60e-14;5!UBERON:0001894;8.99e-11;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.04e-34,2;UBERON:0002757,5.04e-34,2;UBERON:0010134,5.04e-34,2;UBERON:0005408,5.04e-34,2;UBERON:0001899,5.04e-34,2;UBERON:0003296,8.69e-18,4;UBERON:0010133,8.69e-18,4;UBERON:0002784,8.69e-18,4;UBERON:0001872,1.40e-14,5;UBERON:0001894,8.99e-11,7;UBERON:0006222,8.99e-11,7;UBERON:0002780,2.04e-07,41;UBERON:0001890,2.04e-07,41;UBERON:0003080,2.04e-07,41;UBERON:0006240,2.04e-07,41 | |||
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|short_description=p@chr1:181395412..181395421,+ | |||
}} | }} |
Latest revision as of 00:59, 28 July 2015
Short description: | p@chr1:181395412..181395421, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:181395412..181395421, + |
Coexpression cluster: | C2544_small_pineal_parietal_occipital_temporal_maxillary_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 5.04e-34 | 2 |
regional part of epithalamus | 5.04e-34 | 2 |
secretory circumventricular organ | 5.04e-34 | 2 |
circumventricular organ | 5.04e-34 | 2 |
epithalamus | 5.04e-34 | 2 |
gland of diencephalon | 8.69e-18 | 4 |
neuroendocrine gland | 8.69e-18 | 4 |
regional part of diencephalon | 8.69e-18 | 4 |
parietal lobe | 1.40e-14 | 5 |
diencephalon | 8.99e-11 | 7 |
future diencephalon | 8.99e-11 | 7 |
regional part of forebrain | 2.04e-07 | 41 |
forebrain | 2.04e-07 | 41 |
anterior neural tube | 2.04e-07 | 41 |
future forebrain | 2.04e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.03e-17 | 4 |
bronchus cancer | 9.89e-11 | 7 |
bronchogenic carcinoma | 9.89e-11 | 7 |
lung carcinoma | 1.21e-08 | 9 |