FFCP PHASE1:Hg19::chr2:41964638..41964641,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:41964638..41964641,- | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_at_chr2:41964638..41964641,- | |description=CAGE_peak_at_chr2:41964638..41964641,- | ||
|id=chr2:41964638..41964641,- | |id=chr2:41964638..41964641,- | ||
|ontology_enrichment_celltype=CL:0000136!1.77e-07!15 | |ontology_enrichment_celltype=CL:0000136!1.77e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000167;5.26e-18;1!CL:0000164;5.26e-18;1!CL:0000502;5.26e-18;1!CL:0000172;5.26e-18;1!CL:0000173;5.26e-18;1!CL:1000415;9.06e-10;2!CL:0000047;1.64e-09;2!CL:0002615;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,5.26e-18,1;CL:0000164,5.26e-18,1;CL:0000502,5.26e-18,1;CL:0000172,5.26e-18,1;CL:0000173,5.26e-18,1;CL:0002351,5.26e-18,1;CL:1000415,8.69e-10,2;CL:0002615,9.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002351;5.26e-18;1!UBERON:0005425;1.12e-17;1!UBERON:0003056;9.37e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;5.26e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,5.26e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.31e-15!115;UBERON:0002780!9.50e-10!41;UBERON:0001890!9.50e-10!41;UBERON:0006240!9.50e-10!41;UBERON:0002619!1.34e-09!22;UBERON:0005743!1.49e-09!86;UBERON:0001893!1.77e-09!34;UBERON:0001017!1.88e-09!82;UBERON:0003080!2.06e-09!42;UBERON:0001950!3.73e-09!20;UBERON:0001869!4.60e-09!32;UBERON:0002616!4.81e-09!59;UBERON:0000073!7.34e-09!94;UBERON:0001016!7.34e-09!94;UBERON:0002791!1.25e-08!33;UBERON:0000955!2.39e-08!69;UBERON:0006238!2.39e-08!69;UBERON:0000956!3.78e-08!25;UBERON:0000203!3.78e-08!25;UBERON:0001049!1.75e-07!57;UBERON:0005068!1.75e-07!57;UBERON:0006241!1.75e-07!57;UBERON:0007135!1.75e-07!57;UBERON:0002020!3.20e-07!34;UBERON:0003528!3.20e-07!34;UBERON:0000200!4.87e-07!6;UBERON:0003056!9.80e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!5.31e-15!115;UBERON:0002780!9.50e-10!41;UBERON:0001890!9.50e-10!41;UBERON:0006240!9.50e-10!41;UBERON:0002619!1.34e-09!22;UBERON:0005743!1.49e-09!86;UBERON:0001893!1.77e-09!34;UBERON:0001017!1.88e-09!82;UBERON:0003080!2.06e-09!42;UBERON:0001950!3.73e-09!20;UBERON:0001869!4.60e-09!32;UBERON:0002616!4.81e-09!59;UBERON:0000073!7.34e-09!94;UBERON:0001016!7.34e-09!94;UBERON:0002791!1.25e-08!33;UBERON:0000955!2.39e-08!69;UBERON:0006238!2.39e-08!69;UBERON:0000956!3.78e-08!25;UBERON:0000203!3.78e-08!25;UBERON:0001049!1.75e-07!57;UBERON:0005068!1.75e-07!57;UBERON:0006241!1.75e-07!57;UBERON:0007135!1.75e-07!57;UBERON:0002020!3.20e-07!34;UBERON:0003528!3.20e-07!34;UBERON:0000200!4.87e-07!6;UBERON:0003056!9.80e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.12e-17;1!UBERON:0000941;1.12e-17;1!UBERON:0001785;1.12e-17;1!UBERON:0002464;1.12e-17;1!UBERON:0004904;1.12e-17;1!UBERON:0001021;1.12e-17;1!UBERON:0005208;1.12e-17;1!UBERON:0004145;1.12e-17;1!UBERON:0005946;1.12e-17;1!UBERON:0005965;1.12e-17;1!UBERON:0002078;1.12e-17;1!UBERON:0003714;1.64e-09;2!UBERON:0005162;1.64e-09;2!UBERON:0000122;1.64e-09;2!UBERON:0002081;1.64e-09;2!UBERON:0002133;1.64e-09;2!UBERON:0002110;6.32e-07;3!UBERON:0003978;9.37e-07;3!UBERON:0004151;9.37e-07;3!UBERON:0000946;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,8.72e-18,1;UBERON:0005208,8.72e-18,1;UBERON:0005946,8.72e-18,1;UBERON:0005965,8.72e-18,1;UBERON:0002078,8.72e-18,1;UBERON:0000941,1.03e-17,1;UBERON:0001785,1.03e-17,1;UBERON:0002464,1.03e-17,1;UBERON:0004904,1.03e-17,1;UBERON:0001021,1.03e-17,1;UBERON:0003902,1.03e-17,1;UBERON:0005425,1.03e-17,1;UBERON:0002081,1.44e-09,2;UBERON:0002133,1.44e-09,2;UBERON:0010227,1.44e-09,2;UBERON:0003714,1.57e-09,2;UBERON:0005162,1.57e-09,2;UBERON:0000122,1.57e-09,2;UBERON:0002110,6.14e-07,3;UBERON:0006242,6.14e-07,3;UBERON:0003978,8.62e-07,3;UBERON:0009751,8.62e-07,3;UBERON:0004151,8.62e-07,3;UBERON:0000946,8.62e-07,3;UBERON:0002523,8.62e-07,3;UBERON:0005983,8.62e-07,3;UBERON:0004145,8.62e-07,3;UBERON:0002165,8.62e-07,3;UBERON:0002062,8.62e-07,3;UBERON:0007280,8.62e-07,3 | |||
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| ||
|short_description=p@chr2:41964638..41964641,- | |short_description=p@chr2:41964638..41964641,- | ||
}} | }} |
Latest revision as of 10:08, 29 July 2015
Short description: | p@chr2:41964638..41964641, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:41964638..41964641, - |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 5.26e-18 | 1 |
enteroendocrine cell | 5.26e-18 | 1 |
type D enteroendocrine cell | 5.26e-18 | 1 |
somatostatin secreting cell | 5.26e-18 | 1 |
pancreatic D cell | 5.26e-18 | 1 |
progenitor cell of endocrine pancreas | 5.26e-18 | 1 |
epithelial cell of gall bladder | 8.69e-10 | 2 |
adipocyte of omentum tissue | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 8.72e-18 | 1 |
right atrium valve | 8.72e-18 | 1 |
outflow tract of atrium | 8.72e-18 | 1 |
outflow part of right atrium | 8.72e-18 | 1 |
right cardiac atrium | 8.72e-18 | 1 |
cranial nerve II | 1.03e-17 | 1 |
cranial nerve | 1.03e-17 | 1 |
nerve trunk | 1.03e-17 | 1 |
nerve connecting eye with brain | 1.03e-17 | 1 |
nerve | 1.03e-17 | 1 |
retinal neural layer | 1.03e-17 | 1 |
presumptive neural retina | 1.03e-17 | 1 |
cardiac atrium | 1.44e-09 | 2 |
atrioventricular valve | 1.44e-09 | 2 |
future cardiac atrium | 1.44e-09 | 2 |
neural tissue | 1.57e-09 | 2 |
multi cell component structure | 1.57e-09 | 2 |
neuron projection bundle | 1.57e-09 | 2 |
gallbladder | 6.14e-07 | 3 |
gall bladder primordium | 6.14e-07 | 3 |
valve | 8.62e-07 | 3 |
cardiac mesenchyme | 8.62e-07 | 3 |
cardiac chamber | 8.62e-07 | 3 |
cardial valve | 8.62e-07 | 3 |
tunica intima | 8.62e-07 | 3 |
heart layer | 8.62e-07 | 3 |
outflow tract | 8.62e-07 | 3 |
endocardium | 8.62e-07 | 3 |
endocardial cushion | 8.62e-07 | 3 |
presumptive endocardium | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 5.26e-18 | 1 |