FFCP PHASE1:Hg19::chr1:35220725..35220754,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2709 | |EntrezGene=2709 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4287 | |HGNC=4287 | ||
|TSSclassifier=strong | |||
|UniProt=O95377 | |UniProt=O95377 | ||
|association_with_transcript=4bp_to_NM_005268,uc001bxu.2_5end | |association_with_transcript=4bp_to_NM_005268,uc001bxu.2_5end | ||
|cluster_id=chr1:35220725..35220754,+ | |||
|coexpression_cluster_id=C226 | |coexpression_cluster_id=C226 | ||
|description=CAGE_peak_2_at_GJB5_5end | |description=CAGE_peak_2_at_GJB5_5end | ||
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|ontology_enrichment_celltype=CL:0002076!2.09e-28!43;CL:0000066!2.64e-28!254;CL:0000223!1.08e-19!59;CL:0002251!5.40e-18!21;CL:0002368!3.08e-16!13;CL:0002159!1.60e-15!13;CL:0002077!1.01e-09!33;CL:0002202!1.11e-09!9;CL:0002632!1.11e-09!9;CL:0000622!4.80e-09!5;CL:0000244!2.31e-08!4;CL:0000731!2.31e-08!4;CL:0000362!7.48e-08!8;CL:0000240!1.38e-07!6;CL:0000311!1.38e-07!6;CL:0000079!1.38e-07!6;CL:0000237!1.38e-07!6;CL:0000036!1.38e-07!6;CL:0000357!1.38e-07!6;CL:0000114!1.38e-07!6;CL:0000076!1.65e-07!62;CL:0000154!1.93e-07!6;CL:0002328!5.11e-07!3 | |ontology_enrichment_celltype=CL:0002076!2.09e-28!43;CL:0000066!2.64e-28!254;CL:0000223!1.08e-19!59;CL:0002251!5.40e-18!21;CL:0002368!3.08e-16!13;CL:0002159!1.60e-15!13;CL:0002077!1.01e-09!33;CL:0002202!1.11e-09!9;CL:0002632!1.11e-09!9;CL:0000622!4.80e-09!5;CL:0000244!2.31e-08!4;CL:0000731!2.31e-08!4;CL:0000362!7.48e-08!8;CL:0000240!1.38e-07!6;CL:0000311!1.38e-07!6;CL:0000079!1.38e-07!6;CL:0000237!1.38e-07!6;CL:0000036!1.38e-07!6;CL:0000357!1.38e-07!6;CL:0000114!1.38e-07!6;CL:0000076!1.65e-07!62;CL:0000154!1.93e-07!6;CL:0002328!5.11e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.97e-31;42!CL:0002251;6.13e-25;20!CL:0002368;1.35e-22;13!CL:0002159;8.89e-20;14!CL:0000622;5.02e-14;5!CL:0000244;8.19e-13;4!CL:0000731;8.19e-13;4!CL:0002202;4.22e-12;9!CL:0002632;4.22e-12;9!CL:0000154;1.22e-11;6!CL:0002328;1.39e-10;3!CL:0000307;1.08e-09;3!CL:0002166;1.27e-09;3!CL:0002621;1.48e-09;3!CL:0002577;2.72e-09;3!CL:0002623;5.73e-09;3!CL:0002077;7.61e-09;34!CL:0000240;2.99e-08;6!CL:0000311;2.99e-08;6!CL:0000079;2.99e-08;6!CL:0000237;2.99e-08;6!CL:0000362;3.59e-08;9!CL:0002327;1.11e-07;4!CL:0000150;1.19e-07;9!CL:0000575;2.35e-07;2!CL:0000317;9.92e-07;2!CL:1000448;9.92e-07;2!CL:0002308;9.92e-07;2!CL:0002140;9.92e-07;2 | |ontology_enrichment_celltype_v019=CL:0002076;2.97e-31;42!CL:0002251;6.13e-25;20!CL:0002368;1.35e-22;13!CL:0002159;8.89e-20;14!CL:0000622;5.02e-14;5!CL:0000244;8.19e-13;4!CL:0000731;8.19e-13;4!CL:0002202;4.22e-12;9!CL:0002632;4.22e-12;9!CL:0000154;1.22e-11;6!CL:0002328;1.39e-10;3!CL:0000307;1.08e-09;3!CL:0002166;1.27e-09;3!CL:0002621;1.48e-09;3!CL:0002577;2.72e-09;3!CL:0002623;5.73e-09;3!CL:0002077;7.61e-09;34!CL:0000240;2.99e-08;6!CL:0000311;2.99e-08;6!CL:0000079;2.99e-08;6!CL:0000237;2.99e-08;6!CL:0000362;3.59e-08;9!CL:0002327;1.11e-07;4!CL:0000150;1.19e-07;9!CL:0000575;2.35e-07;2!CL:0000317;9.92e-07;2!CL:1000448;9.92e-07;2!CL:0002308;9.92e-07;2!CL:0002140;9.92e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.30e-41,42;CL:0000066,1.72e-30,253;CL:0000223,2.49e-30,58;CL:0002251,7.83e-25,20;CL:0002368,1.43e-22,13;CL:0002159,9.56e-20,14;CL:0000622,5.62e-14,5;CL:0000076,1.15e-13,63;CL:0000244,7.60e-13,4;CL:0000731,7.60e-13,4;CL:0002202,4.26e-12,9;CL:0002632,4.26e-12,9;CL:0000154,1.34e-11,6;CL:0002328,1.27e-10,3;CL:0002077,4.05e-10,34;CL:0000068,1.20e-09,3;CL:0000069,1.20e-09,3;CL:0000307,1.20e-09,3;CL:0000377,1.20e-09,3;CL:0002166,1.35e-09,3;CL:0002621,1.66e-09,3;CL:0002577,2.36e-09,3;CL:0002623,6.60e-09,3;CL:0000240,2.77e-08,6;CL:0000311,2.77e-08,6;CL:0000079,2.77e-08,6;CL:0000237,2.77e-08,6;CL:0000036,2.77e-08,6;CL:0000357,2.77e-08,6;CL:0000114,2.77e-08,6;CL:0000362,3.40e-08,9;CL:0002321,3.78e-08,250;CL:0002327,1.06e-07,4;CL:0000150,1.26e-07,9;CL:0000575,2.74e-07,2;CL:0000317,9.64e-07,2;CL:1000448,9.64e-07,2;CL:0002308,9.64e-07,2;CL:0002140,9.64e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;1.09e-15;58!CL:0000377;1.08e-09;3!CL:0000357;2.99e-08;6!CL:0000114;2.99e-08;6 | |ontology_enrichment_development_v019=CL:0000223;1.09e-15;58!CL:0000377;1.08e-09;3!CL:0000357;2.99e-08;6!CL:0000114;2.99e-08;6 | ||
|ontology_enrichment_disease=DOID:1749!4.70e-17!14;DOID:305!7.70e-11!106 | |ontology_enrichment_disease=DOID:1749!4.70e-17!14;DOID:305!7.70e-11!106 | ||
|ontology_enrichment_disease_v019=DOID:1749;7.13e-28;14 | |ontology_enrichment_disease_v019=DOID:1749;7.13e-28;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,7.14e-28,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.90e-21!72;UBERON:0004119!6.36e-21!169;UBERON:0000925!6.36e-21!169;UBERON:0006595!6.36e-21!169;UBERON:0000065!3.01e-16!53;UBERON:0005631!1.60e-14!14;UBERON:0000158!1.60e-14!14;UBERON:0000161!5.74e-13!35;UBERON:0000077!1.63e-12!130;UBERON:0001007!3.33e-12!155;UBERON:0001555!3.33e-12!155;UBERON:0007026!3.33e-12!155;UBERON:0000072!7.60e-12!46;UBERON:0000166!1.90e-11!21;UBERON:0003124!2.23e-11!7;UBERON:0004921!8.81e-11!129;UBERON:0004185!8.81e-11!129;UBERON:0000344!5.07e-10!12;UBERON:0000365!8.83e-10!5;UBERON:0000064!1.22e-09!219;UBERON:0001041!1.85e-09!98;UBERON:0003729!3.18e-09!5;UBERON:0000165!3.84e-09!28;UBERON:0000930!3.84e-09!28;UBERON:0007196!3.93e-09!14;UBERON:0001558!3.93e-09!14;UBERON:0008947!1.43e-08!38;UBERON:0003258!1.43e-08!38;UBERON:0004923!3.45e-08!57;UBERON:0005910!4.86e-08!6;UBERON:0001557!8.51e-08!19;UBERON:0003343!9.44e-08!4;UBERON:0004785!9.44e-08!4;UBERON:0000974!1.20e-07!10;UBERON:0003102!1.22e-07!95;UBERON:0001987!1.98e-07!4;UBERON:0004340!1.98e-07!4;UBERON:0000478!2.91e-07!24;UBERON:0000062!4.24e-07!511;UBERON:0005178!4.90e-07!34;UBERON:0002224!4.90e-07!34;UBERON:0004815!5.11e-07!3;UBERON:0002031!5.11e-07!3;UBERON:0005181!9.76e-07!35 | |ontology_enrichment_uberon=UBERON:0001004!2.90e-21!72;UBERON:0004119!6.36e-21!169;UBERON:0000925!6.36e-21!169;UBERON:0006595!6.36e-21!169;UBERON:0000065!3.01e-16!53;UBERON:0005631!1.60e-14!14;UBERON:0000158!1.60e-14!14;UBERON:0000161!5.74e-13!35;UBERON:0000077!1.63e-12!130;UBERON:0001007!3.33e-12!155;UBERON:0001555!3.33e-12!155;UBERON:0007026!3.33e-12!155;UBERON:0000072!7.60e-12!46;UBERON:0000166!1.90e-11!21;UBERON:0003124!2.23e-11!7;UBERON:0004921!8.81e-11!129;UBERON:0004185!8.81e-11!129;UBERON:0000344!5.07e-10!12;UBERON:0000365!8.83e-10!5;UBERON:0000064!1.22e-09!219;UBERON:0001041!1.85e-09!98;UBERON:0003729!3.18e-09!5;UBERON:0000165!3.84e-09!28;UBERON:0000930!3.84e-09!28;UBERON:0007196!3.93e-09!14;UBERON:0001558!3.93e-09!14;UBERON:0008947!1.43e-08!38;UBERON:0003258!1.43e-08!38;UBERON:0004923!3.45e-08!57;UBERON:0005910!4.86e-08!6;UBERON:0001557!8.51e-08!19;UBERON:0003343!9.44e-08!4;UBERON:0004785!9.44e-08!4;UBERON:0000974!1.20e-07!10;UBERON:0003102!1.22e-07!95;UBERON:0001987!1.98e-07!4;UBERON:0004340!1.98e-07!4;UBERON:0000478!2.91e-07!24;UBERON:0000062!4.24e-07!511;UBERON:0005178!4.90e-07!34;UBERON:0002224!4.90e-07!34;UBERON:0004815!5.11e-07!3;UBERON:0002031!5.11e-07!3;UBERON:0005181!9.76e-07!35 | ||
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| ||
|short_description=p2@GJB5 | |short_description=p2@GJB5 | ||
}} | }} |
Latest revision as of 17:46, 17 September 2015
Short description: | p2@GJB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GJB5_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 4bp_to_NM_005268, uc001bxu.2_5end |
EntrezGene: | GJB5 |
HGNC: | 4287 |
UniProt: | O95377 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.14e-28 | 14 |