FFCP PHASE1:Hg19::chr15:34629182..34629195,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9990 | |EntrezGene=9990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10914 | |HGNC=10914 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHW9 | |UniProt=Q9UHW9 | ||
|association_with_transcript=-137bp_to_ENST00000397707,ENST00000560611,NM_001042497,NM_133647,uc001zhw.2,uc001zhx.2,uc001zhy.2,uc001zhz.2_5end | |association_with_transcript=-137bp_to_ENST00000397707,ENST00000560611,NM_001042497,NM_133647,uc001zhw.2,uc001zhx.2,uc001zhy.2,uc001zhz.2_5end | ||
|cluster_id=chr15:34629182..34629195,- | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_10_at_SLC12A6_5end | |description=CAGE_peak_10_at_SLC12A6_5end | ||
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|ontology_enrichment_celltype=CL:0000738!2.97e-29!140;CL:0002087!3.19e-27!119;CL:0000766!6.06e-27!76;CL:0002031!5.85e-26!124;CL:0000037!1.80e-25!172;CL:0000566!1.80e-25!172;CL:0002032!7.51e-25!165;CL:0000837!7.51e-25!165;CL:0002057!2.27e-24!42;CL:0000988!5.51e-23!182;CL:0002194!1.57e-22!63;CL:0000576!1.57e-22!63;CL:0000040!1.57e-22!63;CL:0000559!1.57e-22!63;CL:0000860!1.77e-22!45;CL:0000839!1.90e-22!70;CL:0002009!1.18e-21!65;CL:0000557!1.30e-20!71;CL:0000763!5.38e-19!112;CL:0000049!5.38e-19!112;CL:0000134!2.55e-07!358;CL:0002320!5.27e-07!365 | |ontology_enrichment_celltype=CL:0000738!2.97e-29!140;CL:0002087!3.19e-27!119;CL:0000766!6.06e-27!76;CL:0002031!5.85e-26!124;CL:0000037!1.80e-25!172;CL:0000566!1.80e-25!172;CL:0002032!7.51e-25!165;CL:0000837!7.51e-25!165;CL:0002057!2.27e-24!42;CL:0000988!5.51e-23!182;CL:0002194!1.57e-22!63;CL:0000576!1.57e-22!63;CL:0000040!1.57e-22!63;CL:0000559!1.57e-22!63;CL:0000860!1.77e-22!45;CL:0000839!1.90e-22!70;CL:0002009!1.18e-21!65;CL:0000557!1.30e-20!71;CL:0000763!5.38e-19!112;CL:0000049!5.38e-19!112;CL:0000134!2.55e-07!358;CL:0002320!5.27e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.61e-46;33!CL:0002057;2.61e-46;33!CL:0000473;6.90e-42;39!CL:0000234;6.90e-42;39!CL:0000576;4.14e-24;48!CL:0000766;1.29e-19;69!CL:0000738;2.85e-12;136!CL:0000763;5.34e-12;100!CL:0000236;6.85e-12;13!CL:0002087;6.89e-12;104!CL:0000094;6.47e-11;8!CL:0000081;4.93e-10;11!CL:0000775;1.28e-08;3!CL:0000988;2.02e-08;177!CL:0000945;5.89e-07;24 | |ontology_enrichment_celltype_v019=CL:0000860;2.61e-46;33!CL:0002057;2.61e-46;33!CL:0000473;6.90e-42;39!CL:0000234;6.90e-42;39!CL:0000576;4.14e-24;48!CL:0000766;1.29e-19;69!CL:0000738;2.85e-12;136!CL:0000763;5.34e-12;100!CL:0000236;6.85e-12;13!CL:0002087;6.89e-12;104!CL:0000094;6.47e-11;8!CL:0000081;4.93e-10;11!CL:0000775;1.28e-08;3!CL:0000988;2.02e-08;177!CL:0000945;5.89e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.00e-55,72;CL:0000473,4.57e-52,48;CL:0000234,4.57e-52,48;CL:0000860,3.27e-47,42;CL:0002057,3.27e-47,42;CL:0002194,4.42e-47,59;CL:0000576,4.42e-47,59;CL:0000040,4.42e-47,59;CL:0000559,4.42e-47,59;CL:0000738,5.93e-46,136;CL:0002009,3.56e-45,61;CL:0000839,1.43e-43,66;CL:0000557,9.44e-43,67;CL:0002087,1.09e-41,115;CL:0002031,1.86e-39,120;CL:0002032,1.22e-37,161;CL:0000837,1.22e-37,161;CL:0000037,6.52e-37,168;CL:0000763,1.19e-35,108;CL:0000049,1.19e-35,108;CL:0000988,1.65e-35,177;CL:0000134,7.40e-12,354;CL:0002320,2.62e-11,361;CL:0000236,2.91e-11,14;CL:0000094,4.19e-11,8;CL:0000081,4.25e-10,11;CL:0000219,2.17e-09,386;CL:0000775,1.29e-08,3;CL:0000048,5.22e-08,427;CL:0000034,9.68e-08,441;CL:0000723,1.12e-07,433;CL:0000945,3.80e-07,24;CL:0000826,3.80e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-33;42!CL:0000049;1.20e-09;108 | |ontology_enrichment_development_v019=CL:0002057;1.22e-33;42!CL:0000049;1.20e-09;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.95e-19!102;UBERON:0003061!2.95e-19!102;UBERON:0002193!2.26e-18!112;UBERON:0002371!5.92e-17!80;UBERON:0001474!1.27e-14!86;UBERON:0004765!9.22e-13!101;UBERON:0001434!9.22e-13!101;UBERON:0002405!6.22e-10!115 | |ontology_enrichment_uberon=UBERON:0002390!2.95e-19!102;UBERON:0003061!2.95e-19!102;UBERON:0002193!2.26e-18!112;UBERON:0002371!5.92e-17!80;UBERON:0001474!1.27e-14!86;UBERON:0004765!9.22e-13!101;UBERON:0001434!9.22e-13!101;UBERON:0002405!6.22e-10!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.15e-07;15!UBERON:0000179;7.15e-07;15!UBERON:0000463;7.15e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;7.15e-07;15!UBERON:0000179;7.15e-07;15!UBERON:0000463;7.15e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.48e-38,98;UBERON:0003061,2.48e-38,98;UBERON:0002371,2.47e-36,76;UBERON:0002193,3.01e-35,108;UBERON:0001474,7.75e-33,82;UBERON:0002405,3.00e-29,93;UBERON:0004765,6.65e-29,90;UBERON:0001434,7.04e-25,100;UBERON:0003081,8.72e-16,203;UBERON:0002204,4.67e-12,167;UBERON:0002384,1.46e-10,371;UBERON:0000926,4.39e-07,315;UBERON:0004120,4.39e-07,315;UBERON:0006603,4.39e-07,315 | |||
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| ||
|short_description=p10@SLC12A6 | |short_description=p10@SLC12A6 | ||
}} | }} |
Latest revision as of 06:38, 17 September 2015
Short description: | p10@SLC12A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SLC12A6_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -137bp_to_ENST00000397707, ENST00000560611, NM_001042497, NM_133647, uc001zhw.2, uc001zhx.2, uc001zhy.2, uc001zhz.2_5end |
EntrezGene: | SLC12A6 |
HGNC: | 10914 |
UniProt: | Q9UHW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.48e-38 | 98 |
blood island | 2.48e-38 | 98 |
bone marrow | 2.47e-36 | 76 |
hemolymphoid system | 3.01e-35 | 108 |
bone element | 7.75e-33 | 82 |
immune system | 3.00e-29 | 93 |
skeletal element | 6.65e-29 | 90 |
skeletal system | 7.04e-25 | 100 |
lateral plate mesoderm | 8.72e-16 | 203 |
musculoskeletal system | 4.67e-12 | 167 |
connective tissue | 1.46e-10 | 371 |
mesoderm | 4.39e-07 | 315 |
mesoderm-derived structure | 4.39e-07 | 315 |
presumptive mesoderm | 4.39e-07 | 315 |