FFCP PHASE1:Hg19::chr14:95080849..95080854,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=12 | |EntrezGene=12 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16 | |HGNC=16 | ||
|TSSclassifier=strong | |||
|UniProt=P01011 | |UniProt=P01011 | ||
|association_with_transcript=7bp_to_J05176_5end | |association_with_transcript=7bp_to_J05176_5end | ||
|cluster_id=chr14:95080849..95080854,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_19_at_SERPINA3_5end | |description=CAGE_peak_19_at_SERPINA3_5end | ||
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|ontology_enrichment_celltype=CL:0000181!5.98e-08!12;CL:0000417!5.98e-08!12;CL:0000668!5.98e-08!12;CL:0000414!5.98e-08!12;CL:0000412!5.98e-08!12;CL:0000182!5.98e-08!12 | |ontology_enrichment_celltype=CL:0000181!5.98e-08!12;CL:0000417!5.98e-08!12;CL:0000668!5.98e-08!12;CL:0000414!5.98e-08!12;CL:0000412!5.98e-08!12;CL:0000182!5.98e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;9.09e-16;12!CL:0000746;5.93e-08;3 | |ontology_enrichment_celltype_v019=CL:0000182;9.09e-16;12!CL:0000746;5.93e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.09e-16,12;CL:0000746,5.93e-08,3;CL:0000513,5.93e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.72e-21;1!UBERON:0004161;3.43e-08;11!CL:0000513;5.93e-08;3!UBERON:0003056;7.76e-08;3!UBERON:0009497;4.59e-07;13 | |ontology_enrichment_development_v019=UBERON:0005425;7.72e-21;1!UBERON:0004161;3.43e-08;11!CL:0000513;5.93e-08;3!UBERON:0003056;7.76e-08;3!UBERON:0009497;4.59e-07;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p19@SERPINA3 | |short_description=p19@SERPINA3 | ||
}} | }} |
Latest revision as of 18:43, 16 September 2015
Short description: | p19@SERPINA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SERPINA3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 7bp_to_J05176_5end |
EntrezGene: | SERPINA3 |
HGNC: | 16 |
UniProt: | P01011 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.09e-16 | 12 |
cardiac muscle cell | 5.93e-08 | 3 |
cardiac muscle myoblast | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 1.98e-26 | 19 |
digestive gland | 1.98e-26 | 19 |
liver bud | 1.98e-26 | 19 |
hepatic diverticulum | 7.29e-23 | 22 |
liver primordium | 7.29e-23 | 22 |
digestive tract diverticulum | 7.01e-22 | 23 |
cranial nerve II | 9.43e-21 | 1 |
cranial nerve | 9.43e-21 | 1 |
nerve trunk | 9.43e-21 | 1 |
nerve connecting eye with brain | 9.43e-21 | 1 |
nerve | 9.43e-21 | 1 |
retinal neural layer | 9.43e-21 | 1 |
presumptive neural retina | 9.43e-21 | 1 |
epithelial sac | 3.77e-20 | 25 |
epithelium of foregut-midgut junction | 3.77e-20 | 25 |
anatomical boundary | 3.77e-20 | 25 |
hepatobiliary system | 3.77e-20 | 25 |
foregut-midgut junction | 3.77e-20 | 25 |
septum transversum | 3.77e-20 | 25 |
sac | 2.20e-19 | 26 |
exocrine gland | 2.72e-16 | 31 |
exocrine system | 2.72e-16 | 31 |
endocrine system | 6.58e-16 | 45 |
endocrine gland | 1.89e-14 | 35 |
neural tissue | 4.52e-11 | 2 |
multi cell component structure | 4.52e-11 | 2 |
neuron projection bundle | 4.52e-11 | 2 |
gut epithelium | 2.08e-09 | 54 |
abdomen element | 2.08e-09 | 54 |
abdominal segment element | 2.08e-09 | 54 |
gland | 1.29e-08 | 59 |
abdominal segment of trunk | 1.78e-08 | 60 |
abdomen | 1.78e-08 | 60 |
trunk region element | 5.02e-07 | 101 |